BLASTX nr result
ID: Mentha25_contig00023433
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00023433
(403 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU21804.1| hypothetical protein MIMGU_mgv1a015806mg [Mimulus... 92 6e-17
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 80 3e-13
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I... 80 3e-13
gb|AAK12101.1|AF323605_1 RNA polymerase I, II and III subunit RP... 73 5e-11
gb|AAK55847.1|AF266463_1 RNA polymerase subunit [Manihot esculenta] 73 5e-11
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 69 5e-10
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi... 69 5e-10
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr... 69 7e-10
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S... 69 7e-10
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S... 69 7e-10
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 68 1e-09
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun... 66 4e-09
gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 ... 66 6e-09
ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF8... 66 6e-09
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ... 65 7e-09
ref|XP_006478838.1| PREDICTED: DNA-directed RNA polymerases II, ... 65 7e-09
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ... 65 1e-08
ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, I... 64 2e-08
gb|ABK26380.1| unknown [Picea sitchensis] 64 2e-08
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I... 64 2e-08
>gb|EYU21804.1| hypothetical protein MIMGU_mgv1a015806mg [Mimulus guttatus]
Length = 145
Score = 92.4 bits (228), Expect = 6e-17
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = -1
Query: 403 RISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
RISEESREKQVKADI+VSFGGLLM LKGDPSIAARFELDQKLFILIRKV
Sbjct: 97 RISEESREKQVKADIFVSFGGLLMQLKGDPSIAARFELDQKLFILIRKV 145
>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Solanum tuberosum]
Length = 145
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = -1
Query: 403 RISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
RISEE K VKADI+VSFGGLLM L+GDPSIAA+FELDQK+F+LIRKV
Sbjct: 97 RISEEGSGKHVKADIFVSFGGLLMQLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like isoform 1 [Solanum lycopersicum]
gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
isoform 2 [Solanum lycopersicum]
Length = 145
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = -1
Query: 403 RISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
RISEE K VKADI+VSFGGLLM L+GDPSIAA+FELDQK+F+LIRKV
Sbjct: 97 RISEEGSGKHVKADIFVSFGGLLMQLRGDPSIAAKFELDQKIFLLIRKV 145
>gb|AAK12101.1|AF323605_1 RNA polymerase I, II and III subunit RPB8, partial [Manihot
esculenta]
Length = 110
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -1
Query: 403 RISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISEE K VKA+IYVS+GGLLMMLKGDPS + FELDQ+LF+LIRK+
Sbjct: 62 KISEEGSGKAVKAEIYVSYGGLLMMLKGDPSHVSHFELDQRLFLLIRKL 110
>gb|AAK55847.1|AF266463_1 RNA polymerase subunit [Manihot esculenta]
Length = 96
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -1
Query: 403 RISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISEE K VKA+IYVS+GGLLMMLKGDPS + FELDQ+LF+LIRK+
Sbjct: 48 KISEEGSGKAVKAEIYVSYGGLLMMLKGDPSHVSHFELDQRLFLLIRKL 96
>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
sativa Japonica Group]
Length = 396
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/50 (72%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = -1
Query: 403 RISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISE+S Q K +IY SFGGLLMMLKGDPS AA FELDQ+LF+LIRKV
Sbjct: 347 KISEDSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRKV 396
>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
gi|125598367|gb|EAZ38147.1| hypothetical protein
OsJ_22498 [Oryza sativa Japonica Group]
Length = 191
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/50 (72%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = -1
Query: 403 RISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISE+S Q K +IY SFGGLLMMLKGDPS AA FELDQ+LF+LIRKV
Sbjct: 142 KISEDSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRKV 191
>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Citrus
sinensis] gi|557545143|gb|ESR56121.1| hypothetical
protein CICLE_v10022723mg [Citrus clementina]
Length = 146
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = -1
Query: 403 RISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+I +E K +KA+IYVS+GGLLMMLKGDPS + FELDQ+LF+L+RK+
Sbjct: 98 KIGDEGSGKSLKAEIYVSYGGLLMMLKGDPSYVSHFELDQRLFLLMRKL 146
>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
gi|241919960|gb|EER93104.1| hypothetical protein
SORBIDRAFT_01g001330 [Sorghum bicolor]
Length = 145
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = -1
Query: 403 RISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISE++ + K +IY SFGGLLM+L+GDPS AA FELDQ+LF+L+RKV
Sbjct: 97 KISEDTSSQNAKVEIYASFGGLLMLLRGDPSTAASFELDQRLFLLMRKV 145
>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
gi|241917379|gb|EER90523.1| hypothetical protein
SORBIDRAFT_01g001420 [Sorghum bicolor]
Length = 145
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = -1
Query: 403 RISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISE++ + K +IY SFGGLLM+L+GDPS AA FELDQ+LF+L+RKV
Sbjct: 97 KISEDTSSQNAKVEIYASFGGLLMLLRGDPSTAASFELDQRLFLLMRKV 145
>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Oryza brachyantha]
gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X3 [Oryza brachyantha]
gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X4
[Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X5 [Oryza brachyantha]
Length = 146
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/50 (70%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = -1
Query: 403 RISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISE+ Q K +IY SFGGLLMMLKGDPS AA FELDQ+LF+LIRKV
Sbjct: 97 KISEDGSGGQATKVEIYASFGGLLMMLKGDPSTAANFELDQRLFLLIRKV 146
>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
[Aegilops tauschii]
Length = 220
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 3/52 (5%)
Frame = -1
Query: 403 RISEESREKQ---VKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISE++ K K +IY SFGGLLM+LKGDPS AA ELDQKLF+LIRKV
Sbjct: 97 KISEDNSSKDKGPTKVEIYASFGGLLMLLKGDPSSAANLELDQKLFLLIRKV 148
>gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
[Zea mays]
Length = 146
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/50 (64%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = -1
Query: 403 RISEESREKQ-VKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISE++ Q K ++Y SFGGLLM+L+GDPS AA FELDQ+LF+LIRKV
Sbjct: 97 KISEDTSSSQNAKVEMYASFGGLLMLLRGDPSTAASFELDQRLFLLIRKV 146
>ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF83949.1| unknown [Zea
mays] gi|195607894|gb|ACG25777.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195608506|gb|ACG26083.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195611040|gb|ACG27350.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195649823|gb|ACG44379.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195653495|gb|ACG46215.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|238014148|gb|ACR38109.1| unknown [Zea mays]
gi|413932441|gb|AFW66992.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 1 [Zea mays]
gi|413932442|gb|AFW66993.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 2 [Zea mays]
gi|413932443|gb|AFW66994.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 3 [Zea mays]
gi|413932444|gb|AFW66995.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 4 [Zea mays]
Length = 146
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/50 (64%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
Frame = -1
Query: 403 RISEESREKQ-VKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISE++ Q K ++Y SFGGLLM+L+GDPS AA FELDQ+LF+LIRKV
Sbjct: 97 KISEDTSSSQNAKVEMYASFGGLLMLLRGDPSTAASFELDQRLFLLIRKV 146
>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Oryza brachyantha]
Length = 147
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/51 (64%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Frame = -1
Query: 403 RISE--ESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISE E+ + K ++Y SFGGLLMMLKGDPS AA FELDQ+LF+L+RKV
Sbjct: 97 KISEDKETSGQNAKVEMYASFGGLLMMLKGDPSSAANFELDQRLFLLMRKV 147
>ref|XP_006478838.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Citrus sinensis]
Length = 153
Score = 65.5 bits (158), Expect = 7e-09
Identities = 30/49 (61%), Positives = 40/49 (81%)
Frame = -1
Query: 403 RISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
RISEE VKA+IYVSFGGLLM+LKG+PS + F+LDQ+LF+ +R++
Sbjct: 105 RISEEGSGANVKAEIYVSFGGLLMLLKGNPSYVSEFDLDQRLFLCMRRL 153
>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
DNA-directed RNA polymerases I, II, and III 17.1 kDa
polypeptide, putative [Ricinus communis]
Length = 146
Score = 65.1 bits (157), Expect = 1e-08
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -1
Query: 403 RISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISEE K VKA++ VS+GGLLM+L+GDPS + FELDQ+LF+L+RK+
Sbjct: 98 KISEEGSGKAVKAEMLVSYGGLLMLLRGDPSHVSHFELDQRLFLLMRKL 146
>ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Brachypodium distachyon]
Length = 144
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/50 (66%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = -1
Query: 403 RISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISE+S Q K +IY SFGGLLM+LKGDPS AA ELDQ+LF+L+RKV
Sbjct: 95 KISEDSSGGQAAKVEIYASFGGLLMLLKGDPSSAANLELDQRLFLLMRKV 144
>gb|ABK26380.1| unknown [Picea sitchensis]
Length = 145
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = -1
Query: 400 ISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+SEE VK +I SFGGLLM+LKGDPS A FELDQ+LF+L+RKV
Sbjct: 98 LSEEGSGANVKVEINASFGGLLMLLKGDPSNAGNFELDQRLFLLMRKV 145
>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3 isoform 1 [Vitis vinifera]
gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3 isoform 2
[Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
protein product [Vitis vinifera]
Length = 145
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = -1
Query: 403 RISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 257
+ISEE VK IYVSFGGLLMML GDP+ A+ +LDQ++F+LIRKV
Sbjct: 97 KISEEGSGPNVKGVIYVSFGGLLMMLSGDPANTAKLDLDQRVFLLIRKV 145