BLASTX nr result

ID: Mentha25_contig00023212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00023212
         (485 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279933.1| PREDICTED: DNA-binding protein S1FA2 [Vitis ...    59   9e-07
ref|XP_006428828.1| hypothetical protein CICLE_v10013218mg [Citr...    57   3e-06
ref|XP_002285011.1| PREDICTED: DNA-binding protein S1FA2 isoform...    56   5e-06

>ref|XP_002279933.1| PREDICTED: DNA-binding protein S1FA2 [Vitis vinifera]
           gi|297741572|emb|CBI32704.3| unnamed protein product
           [Vitis vinifera]
          Length = 89

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/81 (40%), Positives = 37/81 (45%)
 Frame = +2

Query: 44  DQSPPSFDRTKNMVPDAEAKGFNPXXXXXXXXXXXXXXXXXXNYALYMYAQXXXXXXXXX 223
           ++ PPSFDR +NMV DAEAKGFNP                  N+ LYMYAQ         
Sbjct: 9   EKVPPSFDRMENMVKDAEAKGFNPGLIVLLLVVGVLLVFLVGNFLLYMYAQKTLPRMKKK 68

Query: 224 XXXXXXXXXXXXXQGVSAPGE 286
                        QGVSAPGE
Sbjct: 69  PVSKKKMKRERLKQGVSAPGE 89


>ref|XP_006428828.1| hypothetical protein CICLE_v10013218mg [Citrus clementina]
           gi|568854037|ref|XP_006480642.1| PREDICTED: DNA-binding
           protein S1FA-like [Citrus sinensis]
           gi|557530885|gb|ESR42068.1| hypothetical protein
           CICLE_v10013218mg [Citrus clementina]
          Length = 89

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 33/81 (40%), Positives = 35/81 (43%)
 Frame = +2

Query: 44  DQSPPSFDRTKNMVPDAEAKGFNPXXXXXXXXXXXXXXXXXXNYALYMYAQXXXXXXXXX 223
           D++PPSFDR  N V DA AKGFNP                  NY LYMYAQ         
Sbjct: 9   DKAPPSFDRVGNTVKDAGAKGFNPGLIVLLVVGGLLLVFLIGNYILYMYAQKTLPPKKKK 68

Query: 224 XXXXXXXXXXXXXQGVSAPGE 286
                        QGVSAPGE
Sbjct: 69  PVSKKKMKKERLKQGVSAPGE 89


>ref|XP_002285011.1| PREDICTED: DNA-binding protein S1FA2 isoform 1 [Vitis vinifera]
           gi|225435257|ref|XP_002285012.1| PREDICTED: DNA-binding
           protein S1FA2 isoform 2 [Vitis vinifera]
           gi|297746228|emb|CBI16284.3| unnamed protein product
           [Vitis vinifera]
          Length = 89

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 31/81 (38%), Positives = 37/81 (45%)
 Frame = +2

Query: 44  DQSPPSFDRTKNMVPDAEAKGFNPXXXXXXXXXXXXXXXXXXNYALYMYAQXXXXXXXXX 223
           D+ PPSF+R  N++ DA+AKGFNP                  NYALY+YAQ         
Sbjct: 9   DKVPPSFERMGNVIKDADAKGFNPGLIVLLLVVGLLLVFLVGNYALYVYAQKTLPPRKKK 68

Query: 224 XXXXXXXXXXXXXQGVSAPGE 286
                        QGVSAPGE
Sbjct: 69  PVSKKKMKKERLKQGVSAPGE 89


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