BLASTX nr result
ID: Mentha25_contig00021847
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00021847
(1006 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX95374.1| Integrase core domain, putative [Oryza sativa Jap... 44 1e-06
gb|AAX96109.1| retrotransposon protein, putative, Ty1-copia sub-... 44 1e-06
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi] 51 3e-06
ref|XP_760555.1| hypothetical protein UM04408.1 [Ustilago maydis... 44 3e-06
gb|ABD17352.1| hobase [Ustilago maydis] 44 3e-06
>gb|AAX95374.1| Integrase core domain, putative [Oryza sativa Japonica Group]
gi|108864298|gb|ABA92908.2| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1393
Score = 43.5 bits (101), Expect(2) = 1e-06
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 20/121 (16%)
Frame = -1
Query: 412 PMLEDGKPSTKFILDTAATKHIISNKNLFSTFE-------------------K*TVNLQF 290
P + ST + +DT + H+ ++ +LFS+++ TV+L+F
Sbjct: 289 PAIFSVNQSTNWWVDTRSNVHVCADISLFSSYQVARGSTVLMGNGSHVSVHGVGTVDLKF 348
Query: 289 AANSHIYTLKNCLYMPELGINIISQSEM-RADFVSIFTKDKVVIKCQNMVIAQGHKTNNL 113
+ I LKN ++P + N++S S + RA F +F +KVV+ I +G++ L
Sbjct: 349 TSGK-IVQLKNVQHVPSIDRNLVSGSRLTRAGFKLVFESNKVVVSKHGYFIGKGYECGGL 407
Query: 112 Y 110
+
Sbjct: 408 F 408
Score = 36.6 bits (83), Expect(2) = 1e-06
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 6/167 (3%)
Frame = -2
Query: 999 SMEEYLNKIRQLNDDLSVKNINLPKQVIIAWVLNNLTDDFEIIVSSITQSLRTDMSSYDI 820
S+ E ++I+ + +L + LP + + ++ L + S +L+ Y +
Sbjct: 119 SVVEQAHEIQTMAKELELLKCVLPDKFVARCIIAKLPPSWR----SFGTALKHKRQEYSV 174
Query: 819 DQLFANL-LDESKRLSSLKLSHDTVMLASTGGKNLQRYNNVSKNKYKIQKGKFCQKCKKN 643
+ L A+L ++E R D + + + N SK KYK Q+ +K KKN
Sbjct: 175 EGLIASLDVEEKAREKDAASKGDG---GQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231
Query: 642 NHNTSE----CFFLKRKSQI-QKQRQMQVQSEKSSLNDREENLLMSN 517
N+N ++ CF + + +K Q + + + N+ +SN
Sbjct: 232 NNNPNQDERTCFVCGQLGHLARKCPQRKGMKAPTGQTSKSANVTISN 278
>gb|AAX96109.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1350
Score = 43.5 bits (101), Expect(2) = 1e-06
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 20/121 (16%)
Frame = -1
Query: 412 PMLEDGKPSTKFILDTAATKHIISNKNLFSTFE-------------------K*TVNLQF 290
P + ST + +DT + H+ ++ +LFS+++ TV+L+F
Sbjct: 289 PAIFSVNQSTNWWVDTRSNVHVCADISLFSSYQVARGSTVLMGNGSHVSVHGVGTVDLKF 348
Query: 289 AANSHIYTLKNCLYMPELGINIISQSEM-RADFVSIFTKDKVVIKCQNMVIAQGHKTNNL 113
+ I LKN ++P + N++S S + RA F +F +KVV+ I +G++ L
Sbjct: 349 TSGK-IVQLKNVQHVPSIDRNLVSGSRLTRAGFKLVFESNKVVVSKHGYFIGKGYECGGL 407
Query: 112 Y 110
+
Sbjct: 408 F 408
Score = 36.6 bits (83), Expect(2) = 1e-06
Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 6/167 (3%)
Frame = -2
Query: 999 SMEEYLNKIRQLNDDLSVKNINLPKQVIIAWVLNNLTDDFEIIVSSITQSLRTDMSSYDI 820
S+ E ++I+ + +L + LP + + ++ L + S +L+ Y +
Sbjct: 119 SVVEQAHEIQTMAKELELLKCVLPDKFVARCIIAKLPPSWR----SFGTALKHKRQEYSV 174
Query: 819 DQLFANL-LDESKRLSSLKLSHDTVMLASTGGKNLQRYNNVSKNKYKIQKGKFCQKCKKN 643
+ L A+L ++E R D + + + N SK KYK Q+ +K KKN
Sbjct: 175 EGLIASLDVEEKAREKDAASKGDG---GQSSANVVHKAQNKSKGKYKAQQTTNFKKQKKN 231
Query: 642 NHNTSE----CFFLKRKSQI-QKQRQMQVQSEKSSLNDREENLLMSN 517
N+N ++ CF + + +K Q + + + N+ +SN
Sbjct: 232 NNNPNQDERTCFVCGQLGHLARKCPQRKGMKAPTGQTSKSANVTISN 278
>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
Length = 701
Score = 50.8 bits (120), Expect(2) = 3e-06
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 20/120 (16%)
Frame = -1
Query: 397 GKPSTKFILDTAATKHIISNKNLFSTFE----K*TVNLQFAANSHI-------------- 272
G ++ +DT AT+H+ S+K LF++FE + + + +A S I
Sbjct: 319 GSNPREWWIDTGATRHVCSDKGLFTSFEAASNREKLFMGNSATSEIEGQGKVALKMTSGK 378
Query: 271 -YTLKNCLYMPELGINIISQSEM-RADFVSIFTKDKVVIKCQNMVIAQGHKTNNLYYLHV 98
TL N LY+PE+ N++S S + + F +F D VV+ M + +G+ + L+ L+V
Sbjct: 379 ELTLNNVLYVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGKGYVNDGLFKLNV 438
Score = 28.1 bits (61), Expect(2) = 3e-06
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = -2
Query: 726 KNLQRYNNVSKNKYKIQKGKFCQKCKKNNHNTSECFF--LKRKSQIQKQRQMQVQSEKSS 553
K L +SK + K Q GK C C K H S+C KR++ + + V S
Sbjct: 252 KKLGPKGGISKKQTKFQ-GK-CYNCDKMGHKASDCRLPKKKREANVVENITQHVSDINLS 309
Query: 552 LNDREENLLMSNETE 508
E N++ SN E
Sbjct: 310 AVVLEVNMVGSNPRE 324
>ref|XP_760555.1| hypothetical protein UM04408.1 [Ustilago maydis 521]
gi|46100443|gb|EAK85676.1| hypothetical protein
UM04408.1 [Ustilago maydis 521]
Length = 1834
Score = 43.5 bits (101), Expect(2) = 3e-06
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
Frame = -2
Query: 786 KRLSSLKLSHDTVMLASTGGKNLQRYN-----NVSKNKYKIQKGKFCQKCKKNNHNTSEC 622
K L +++ T+M K+ +R K K KFC CK++NHN +C
Sbjct: 214 KALEDYEIAVSTIMAEEAEQKSFRRQYPARAMQAQSQPVKKGKDKFCTNCKRDNHNLEDC 273
Query: 621 FF---LKRKSQIQKQRQ---MQVQSEKSSLNDREENLLMSNETEIEN 499
F K K + +KQ+Q +V + ++ E NL + T +N
Sbjct: 274 FMEGGPKHKDRTEKQKQKKTKKVTGNLAQVDSDEMNLCLHVSTPDDN 320
Score = 35.0 bits (79), Expect(2) = 3e-06
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 31/145 (21%)
Frame = -1
Query: 379 FILDTAATKHIISNKNLFSTFEK*TVNLQFAANSH----------------------IYT 266
+I+D+ A++H+ +K LFST+ V F A++ T
Sbjct: 328 WIIDSGASRHMTGDKTLFSTYGPSPVQEVFVADNRGVPVAGMGNVRLVMSNSKGSRKSIT 387
Query: 265 LKNCLYMPELGINIISQSEMRADFVSI-FTKDKV-VIKCQNMVIAQGHKTNNLYYLHVN- 95
L++ L++P LG N+ S +++ SI FTK V + + + +G + ++ YL V
Sbjct: 388 LQDVLHVPGLGNNLFSTPQVQRLGGSINFTKKTVEIFDKKGRLALRGKRRGDVNYLLVEG 447
Query: 94 ------KIVLPDQKLKQTQVKNRPL 38
K+V ++ L Q ++ ++ L
Sbjct: 448 TTTAVAKLVTSEKALDQAKLWHQRL 472
>gb|ABD17352.1| hobase [Ustilago maydis]
Length = 1497
Score = 43.5 bits (101), Expect(2) = 3e-06
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
Frame = -2
Query: 786 KRLSSLKLSHDTVMLASTGGKNLQRYN-----NVSKNKYKIQKGKFCQKCKKNNHNTSEC 622
K L +++ T+M K+ +R K K KFC CK++NHN +C
Sbjct: 214 KALEDYEIAVSTIMAEEAEQKSFRRQYPARAMQAQSQPVKKGKDKFCTNCKRDNHNLEDC 273
Query: 621 FF---LKRKSQIQKQRQ---MQVQSEKSSLNDREENLLMSNETEIEN 499
F K K + +KQ+Q +V + ++ E NL + T +N
Sbjct: 274 FMEGGPKHKDRTEKQKQKKTKKVTGNLAQVDSDEMNLCLHVSTPDDN 320
Score = 35.0 bits (79), Expect(2) = 3e-06
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 31/145 (21%)
Frame = -1
Query: 379 FILDTAATKHIISNKNLFSTFEK*TVNLQFAANSH----------------------IYT 266
+I+D+ A++H+ +K LFST+ V F A++ T
Sbjct: 328 WIIDSGASRHMTGDKTLFSTYGPSPVQEVFVADNRGVPVAGMGNVRLVMSNSKGSRKSIT 387
Query: 265 LKNCLYMPELGINIISQSEMRADFVSI-FTKDKV-VIKCQNMVIAQGHKTNNLYYLHVN- 95
L++ L++P LG N+ S +++ SI FTK V + + + +G + ++ YL V
Sbjct: 388 LQDVLHVPGLGNNLFSTPQVQRLGGSINFTKKTVEIFDKKGRLALRGKRRGDVNYLLVEG 447
Query: 94 ------KIVLPDQKLKQTQVKNRPL 38
K+V ++ L Q ++ ++ L
Sbjct: 448 TTTAVAKLVTSEKALDQAKLWHQRL 472