BLASTX nr result

ID: Mentha25_contig00021024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00021024
         (349 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU46764.1| hypothetical protein MIMGU_mgv1a0060621mg, partia...    62   6e-08
ref|NP_001274800.1| probable polygalacturonase-like [Solanum tub...    59   7e-07
ref|XP_004247394.1| PREDICTED: probable polygalacturonase-like [...    57   2e-06
ref|XP_004240577.1| PREDICTED: probable polygalacturonase-like [...    57   3e-06

>gb|EYU46764.1| hypothetical protein MIMGU_mgv1a0060621mg, partial [Mimulus
           guttatus]
          Length = 318

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = +2

Query: 14  DPSTSWICAFVEGESVNVSPEPCPELQFSPSTGPLSDCFVFS-HPNSQVA 160
           DPS SW+C+ V G SVNVSPEPCPELQ S S+   SDC V S H N++VA
Sbjct: 268 DPSNSWVCSDVVGSSVNVSPEPCPELQ-SSSSSDSSDCSVLSLHANNRVA 316


>ref|NP_001274800.1| probable polygalacturonase-like [Solanum tuberosum]
           gi|81074755|gb|ABB55373.1| polygalacturonase-like
           protein-like [Solanum tuberosum]
          Length = 479

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/51 (52%), Positives = 33/51 (64%)
 Frame = +2

Query: 8   SFDPSTSWICAFVEGESVNVSPEPCPELQFSPSTGPLSDCFVFSHPNSQVA 160
           S DPST W+C+ + G S NVSPEPCPELQ     G  S CF   +P ++VA
Sbjct: 432 SSDPSTPWLCSNISGSSKNVSPEPCPELQ-----GSFSSCFALPNPYTEVA 477


>ref|XP_004247394.1| PREDICTED: probable polygalacturonase-like [Solanum lycopersicum]
          Length = 480

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/51 (50%), Positives = 32/51 (62%)
 Frame = +2

Query: 8   SFDPSTSWICAFVEGESVNVSPEPCPELQFSPSTGPLSDCFVFSHPNSQVA 160
           S DPST W+C+ + G S N SPEPCPELQ     G  S CF   +P ++VA
Sbjct: 433 SSDPSTPWLCSNISGSSKNASPEPCPELQ-----GSFSSCFALPNPYTEVA 478


>ref|XP_004240577.1| PREDICTED: probable polygalacturonase-like [Solanum lycopersicum]
          Length = 457

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
 Frame = +2

Query: 8   SFDPSTSWICAFVEGESVNVSPEPCPELQFSPSTGPLSDCF-VFSHPNSQVA 160
           S++P TSW+C+ V G S NVSPEPCPEL+ S S+   S CF +  HP SQVA
Sbjct: 405 SYNPFTSWLCSDVSGFSQNVSPEPCPELESSFSS-TTSTCFTLLHHPYSQVA 455


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