BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00019825
         (369 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU21804.1| hypothetical protein MIMGU_mgv1a015806mg [Mimulus...    95   9e-18
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ...    83   5e-14
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I...    83   5e-14
gb|AAK12101.1|AF323605_1 RNA polymerase I, II and III subunit RP...    75   7e-12
gb|AAK55847.1|AF266463_1 RNA polymerase subunit [Manihot esculenta]    75   7e-12
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...    72   8e-11
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...    72   8e-11
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S...    72   1e-10
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S...    72   1e-10
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ...    70   2e-10
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr...    70   3e-10
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun...    69   7e-10
gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 ...    69   9e-10
ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF8...    69   9e-10
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ...    68   1e-09
ref|XP_006478838.1| PREDICTED: DNA-directed RNA polymerases II, ...    68   1e-09
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ...    68   2e-09
ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, I...    67   3e-09
gb|ABK26380.1| unknown [Picea sitchensis]                              67   3e-09
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...    67   3e-09

>gb|EYU21804.1| hypothetical protein MIMGU_mgv1a015806mg [Mimulus guttatus]
          Length = 145

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 48/50 (96%), Positives = 49/50 (98%)
 Frame = -3

Query: 367 YRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           YRISEESREKQVKADI+VSFGGLLM LKGDPSIAARFELDQKLFILIRKV
Sbjct: 96  YRISEESREKQVKADIFVSFGGLLMQLKGDPSIAARFELDQKLFILIRKV 145


>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Solanum tuberosum]
          Length = 145

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 40/50 (80%), Positives = 45/50 (90%)
 Frame = -3

Query: 367 YRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           YRISEE   K VKADI+VSFGGLLM L+GDPSIAA+FELDQK+F+LIRKV
Sbjct: 96  YRISEEGSGKHVKADIFVSFGGLLMQLRGDPSIAAKFELDQKIFLLIRKV 145


>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like isoform 1 [Solanum lycopersicum]
           gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           isoform 2 [Solanum lycopersicum]
          Length = 145

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 40/50 (80%), Positives = 45/50 (90%)
 Frame = -3

Query: 367 YRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           YRISEE   K VKADI+VSFGGLLM L+GDPSIAA+FELDQK+F+LIRKV
Sbjct: 96  YRISEEGSGKHVKADIFVSFGGLLMQLRGDPSIAAKFELDQKIFLLIRKV 145


>gb|AAK12101.1|AF323605_1 RNA polymerase I, II and III subunit RPB8, partial [Manihot
           esculenta]
          Length = 110

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 36/50 (72%), Positives = 43/50 (86%)
 Frame = -3

Query: 367 YRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISEE   K VKA+IYVS+GGLLMMLKGDPS  + FELDQ+LF+LIRK+
Sbjct: 61  YKISEEGSGKAVKAEIYVSYGGLLMMLKGDPSHVSHFELDQRLFLLIRKL 110


>gb|AAK55847.1|AF266463_1 RNA polymerase subunit [Manihot esculenta]
          Length = 96

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 36/50 (72%), Positives = 43/50 (86%)
 Frame = -3

Query: 367 YRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISEE   K VKA+IYVS+GGLLMMLKGDPS  + FELDQ+LF+LIRK+
Sbjct: 47  YKISEEGSGKAVKAEIYVSYGGLLMMLKGDPSHVSHFELDQRLFLLIRKL 96


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/51 (72%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
 Frame = -3

Query: 367 YRISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISE+S   Q  K +IY SFGGLLMMLKGDPS AA FELDQ+LF+LIRKV
Sbjct: 346 YKISEDSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRKV 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 37/51 (72%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
 Frame = -3

Query: 367 YRISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISE+S   Q  K +IY SFGGLLMMLKGDPS AA FELDQ+LF+LIRKV
Sbjct: 141 YKISEDSSSGQATKVEIYASFGGLLMMLKGDPSSAASFELDQRLFLLIRKV 191


>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
           gi|241919960|gb|EER93104.1| hypothetical protein
           SORBIDRAFT_01g001330 [Sorghum bicolor]
          Length = 145

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/50 (64%), Positives = 42/50 (84%)
 Frame = -3

Query: 367 YRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISE++  +  K +IY SFGGLLM+L+GDPS AA FELDQ+LF+L+RKV
Sbjct: 96  YKISEDTSSQNAKVEIYASFGGLLMLLRGDPSTAASFELDQRLFLLMRKV 145


>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
           gi|241917379|gb|EER90523.1| hypothetical protein
           SORBIDRAFT_01g001420 [Sorghum bicolor]
          Length = 145

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/50 (64%), Positives = 42/50 (84%)
 Frame = -3

Query: 367 YRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISE++  +  K +IY SFGGLLM+L+GDPS AA FELDQ+LF+L+RKV
Sbjct: 96  YKISEDTSSQNAKVEIYASFGGLLMLLRGDPSTAASFELDQRLFLLMRKV 145


>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Oryza brachyantha]
           gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X2
           [Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X3 [Oryza brachyantha]
           gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X4
           [Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X5 [Oryza brachyantha]
          Length = 146

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 36/51 (70%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
 Frame = -3

Query: 367 YRISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISE+    Q  K +IY SFGGLLMMLKGDPS AA FELDQ+LF+LIRKV
Sbjct: 96  YKISEDGSGGQATKVEIYASFGGLLMMLKGDPSTAANFELDQRLFLLIRKV 146


>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
           gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like [Citrus
           sinensis] gi|557545143|gb|ESR56121.1| hypothetical
           protein CICLE_v10022723mg [Citrus clementina]
          Length = 146

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = -3

Query: 367 YRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           ++I +E   K +KA+IYVS+GGLLMMLKGDPS  + FELDQ+LF+L+RK+
Sbjct: 97  FKIGDEGSGKSLKAEIYVSYGGLLMMLKGDPSYVSHFELDQRLFLLMRKL 146


>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
           [Aegilops tauschii]
          Length = 220

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 35/53 (66%), Positives = 41/53 (77%), Gaps = 3/53 (5%)
 Frame = -3

Query: 367 YRISEESREKQ---VKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISE++  K     K +IY SFGGLLM+LKGDPS AA  ELDQKLF+LIRKV
Sbjct: 96  YKISEDNSSKDKGPTKVEIYASFGGLLMLLKGDPSSAANLELDQKLFLLIRKV 148


>gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
           [Zea mays]
          Length = 146

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/51 (64%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
 Frame = -3

Query: 367 YRISEESREKQ-VKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISE++   Q  K ++Y SFGGLLM+L+GDPS AA FELDQ+LF+LIRKV
Sbjct: 96  YKISEDTSSSQNAKVEMYASFGGLLMLLRGDPSTAASFELDQRLFLLIRKV 146


>ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF83949.1| unknown [Zea
           mays] gi|195607894|gb|ACG25777.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195608506|gb|ACG26083.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195611040|gb|ACG27350.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195649823|gb|ACG44379.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|195653495|gb|ACG46215.1| DNA-directed RNA
           polymerases I, II, and III 17.1 kDa polypeptide [Zea
           mays] gi|238014148|gb|ACR38109.1| unknown [Zea mays]
           gi|413932441|gb|AFW66992.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 1 [Zea mays]
           gi|413932442|gb|AFW66993.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 2 [Zea mays]
           gi|413932443|gb|AFW66994.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 3 [Zea mays]
           gi|413932444|gb|AFW66995.1| DNA-directed RNA polymerase
           I, II, and III polypeptide isoform 4 [Zea mays]
          Length = 146

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 33/51 (64%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
 Frame = -3

Query: 367 YRISEESREKQ-VKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISE++   Q  K ++Y SFGGLLM+L+GDPS AA FELDQ+LF+LIRKV
Sbjct: 96  YKISEDTSSSQNAKVEMYASFGGLLMLLRGDPSTAASFELDQRLFLLIRKV 146


>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Oryza brachyantha]
          Length = 147

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
 Frame = -3

Query: 367 YRISE--ESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISE  E+  +  K ++Y SFGGLLMMLKGDPS AA FELDQ+LF+L+RKV
Sbjct: 96  YKISEDKETSGQNAKVEMYASFGGLLMMLKGDPSSAANFELDQRLFLLMRKV 147


>ref|XP_006478838.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Citrus sinensis]
          Length = 153

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/50 (62%), Positives = 41/50 (82%)
 Frame = -3

Query: 367 YRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           YRISEE     VKA+IYVSFGGLLM+LKG+PS  + F+LDQ+LF+ +R++
Sbjct: 104 YRISEEGSGANVKAEIYVSFGGLLMLLKGNPSYVSEFDLDQRLFLCMRRL 153


>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
           putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
           DNA-directed RNA polymerases I, II, and III 17.1 kDa
           polypeptide, putative [Ricinus communis]
          Length = 146

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = -3

Query: 367 YRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISEE   K VKA++ VS+GGLLM+L+GDPS  + FELDQ+LF+L+RK+
Sbjct: 97  YKISEEGSGKAVKAEMLVSYGGLLMLLRGDPSHVSHFELDQRLFLLMRKL 146


>ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 144

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 34/51 (66%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
 Frame = -3

Query: 367 YRISEESREKQV-KADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISE+S   Q  K +IY SFGGLLM+LKGDPS AA  ELDQ+LF+L+RKV
Sbjct: 94  YKISEDSSGGQAAKVEIYASFGGLLMLLKGDPSSAANLELDQRLFLLMRKV 144


>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/50 (64%), Positives = 38/50 (76%)
 Frame = -3

Query: 367 YRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y +SEE     VK +I  SFGGLLM+LKGDPS A  FELDQ+LF+L+RKV
Sbjct: 96  YNLSEEGSGANVKVEINASFGGLLMLLKGDPSNAGNFELDQRLFLLMRKV 145


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/50 (64%), Positives = 39/50 (78%)
 Frame = -3

Query: 367 YRISEESREKQVKADIYVSFGGLLMMLKGDPSIAARFELDQKLFILIRKV 218
           Y+ISEE     VK  IYVSFGGLLMML GDP+  A+ +LDQ++F+LIRKV
Sbjct: 96  YKISEEGSGPNVKGVIYVSFGGLLMMLSGDPANTAKLDLDQRVFLLIRKV 145