BLASTX nr result

ID: Mentha25_contig00019055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00019055
         (572 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44036.1| hypothetical protein MIMGU_mgv1a026149mg [Mimulus...    62   1e-07
ref|XP_007032935.1| Pentatricopeptide repeat (PPR) superfamily p...    58   2e-06
gb|EYU44257.1| hypothetical protein MIMGU_mgv1a021838mg [Mimulus...    57   4e-06
gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabid...    56   6e-06
ref|XP_002884315.1| pentatricopeptide repeat-containing protein ...    56   6e-06
ref|NP_186882.2| pentatricopeptide repeat-containing protein [Ar...    56   6e-06
gb|AAF02108.1|AC009755_1 hypothetical protein [Arabidopsis thali...    56   6e-06

>gb|EYU44036.1| hypothetical protein MIMGU_mgv1a026149mg [Mimulus guttatus]
          Length = 258

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 3/56 (5%)
 Frame = +1

Query: 1   IAAFDNATQVQKKRRRAAEEELASLKYHPLRDSANTS---SGCQVRSKRLKHSSMV 159
           IA FD A +++K+R  AA+EELAS+KYHPLRD  ++S   + C+ R K+LKH+S +
Sbjct: 184 IAGFDKALRIEKRRLNAAKEELASVKYHPLRDFGSSSFQPNDCRTRPKKLKHTSKI 239


>ref|XP_007032935.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508711964|gb|EOY03861.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 860

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 3/63 (4%)
 Frame = -1

Query: 566 IITRSDVANAGYVKQNHAQVIKRELQSHI---STLVEMHPKCGNVHDSLMMYRDLSDLQC 396
           I T +++A  G  KQ HAQ+IK ELQS +   STLV+M+ KCGN+HDS +M+   +D   
Sbjct: 560 IDTCANLATVGLGKQIHAQIIKLELQSDVYICSTLVDMYSKCGNMHDSKLMFEKATD--- 616

Query: 395 RDF 387
           RDF
Sbjct: 617 RDF 619


>gb|EYU44257.1| hypothetical protein MIMGU_mgv1a021838mg [Mimulus guttatus]
          Length = 820

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = -1

Query: 560 TRSDVANAGYVKQNHAQVIKRELQSHI---STLVEMHPKCGNVHDSLMMYRDLSDLQCRD 390
           T S+VAN G  KQ HAQ+IK++L S +   STLV+M+ KCGN+ DS++M+    D   RD
Sbjct: 540 TCSNVANIGLGKQIHAQIIKQDLTSDVYITSTLVDMYSKCGNMEDSVLMFEKSPD---RD 596

Query: 389 FYYYGNEALQDLH 351
           F  +   A    H
Sbjct: 597 FVTWNAMACAYAH 609


>gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = -1

Query: 560 TRSDVANAGYVKQNHAQVIKRELQSHI---STLVEMHPKCGNVHDSLMMY 420
           T +++A+AG  KQ HAQVIK+ELQS +   STLV+M+ KCG++HDS +M+
Sbjct: 570 TCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 619


>ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330155|gb|EFH60574.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 861

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = -1

Query: 560 TRSDVANAGYVKQNHAQVIKRELQSHI---STLVEMHPKCGNVHDSLMMY 420
           T +++A+AG  KQ HAQVIK+ELQS +   STLV+M+ KCG++HDS +M+
Sbjct: 570 TCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMF 619


>ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g02330 gi|332640272|gb|AEE73793.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = -1

Query: 560 TRSDVANAGYVKQNHAQVIKRELQSHI---STLVEMHPKCGNVHDSLMMY 420
           T +++A+AG  KQ HAQVIK+ELQS +   STLV+M+ KCG++HDS +M+
Sbjct: 612 TCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 661


>gb|AAF02108.1|AC009755_1 hypothetical protein [Arabidopsis thaliana]
          Length = 332

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 28/50 (56%), Positives = 40/50 (80%), Gaps = 3/50 (6%)
 Frame = -1

Query: 560 TRSDVANAGYVKQNHAQVIKRELQSHI---STLVEMHPKCGNVHDSLMMY 420
           T +++A+AG  KQ HAQVIK+ELQS +   STLV+M+ KCG++HDS +M+
Sbjct: 41  TCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF 90


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