BLASTX nr result

ID: Mentha25_contig00018973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00018973
         (415 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447732.1| hypothetical protein SORBIDRAFT_06g014760 [S...    59   9e-07
tpg|DAA38040.1| TPA: hypothetical protein ZEAMMB73_664013 [Zea m...    57   3e-06
ref|NP_001146467.1| uncharacterized protein LOC100280055 [Zea ma...    57   3e-06
ref|XP_004963978.1| PREDICTED: coilin-like, partial [Setaria ita...    56   6e-06

>ref|XP_002447732.1| hypothetical protein SORBIDRAFT_06g014760 [Sorghum bicolor]
           gi|241938915|gb|EES12060.1| hypothetical protein
           SORBIDRAFT_06g014760 [Sorghum bicolor]
          Length = 478

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
 Frame = -3

Query: 410 NSWGKNEKKLRPSPSPSESAGSKWGKNNTQK-----RQNSWG--KQNTGSKSWSYRALRG 252
           N+    E+KL  S S      + W KN+        ++N WG  KQN  + +WSYRALR 
Sbjct: 398 NNTKDEERKLGKSES------TVWEKNDEPSDKVDVQENGWGTWKQNASTSAWSYRALRS 451

Query: 251 SALGPSMAMLRSKNDS*G 198
           SALGP+MAMLR KN   G
Sbjct: 452 SALGPTMAMLRGKNSQRG 469


>tpg|DAA38040.1| TPA: hypothetical protein ZEAMMB73_664013 [Zea mays]
          Length = 608

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
 Frame = -3

Query: 398 KNEKKLRPSPSP-------SESAGSKWGKNN-----TQKRQNSWG--KQNTGSKSWSYRA 261
           KNE  +    SP        +S  + W KN+        +QN WG  KQN+ S +WSYRA
Sbjct: 520 KNEGNIESQKSPLVANNTNGKSEKTVWEKNDEPGDEVDVQQNGWGTWKQNSTS-AWSYRA 578

Query: 260 LRGSALGPSMAMLRSKNDS*G 198
           LR SALGP+MA+LR KN+  G
Sbjct: 579 LRSSALGPTMALLRGKNNQRG 599


>ref|NP_001146467.1| uncharacterized protein LOC100280055 [Zea mays]
           gi|219887405|gb|ACL54077.1| unknown [Zea mays]
          Length = 608

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 14/81 (17%)
 Frame = -3

Query: 398 KNEKKLRPSPSP-------SESAGSKWGKNN-----TQKRQNSWG--KQNTGSKSWSYRA 261
           KNE  +    SP        +S  + W KN+        +QN WG  KQN+ S +WSYRA
Sbjct: 520 KNEGNIESQKSPLVANNTNGKSEKTVWEKNDEPGDEVDVQQNGWGTWKQNSTS-AWSYRA 578

Query: 260 LRGSALGPSMAMLRSKNDS*G 198
           LR SALGP+MA+LR KN+  G
Sbjct: 579 LRSSALGPTMALLRGKNNQRG 599


>ref|XP_004963978.1| PREDICTED: coilin-like, partial [Setaria italica]
          Length = 612

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
 Frame = -3

Query: 332 NNTQKRQNSWG--KQNTGSKSWSYRALRGSALGPSMAMLRSKNDS*G 198
           + T  ++N WG  K+N  + +WSYRALR SALGP+MAMLR KN   G
Sbjct: 557 DKTDVQENGWGTWKRNASTSAWSYRALRSSALGPTMAMLRGKNSQRG 603


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