BLASTX nr result

ID: Mentha25_contig00018966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00018966
         (597 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447732.1| hypothetical protein SORBIDRAFT_06g014760 [S...    57   3e-06
ref|XP_006357585.1| PREDICTED: DNA ligase 1-like [Solanum tubero...    57   5e-06

>ref|XP_002447732.1| hypothetical protein SORBIDRAFT_06g014760 [Sorghum bicolor]
           gi|241938915|gb|EES12060.1| hypothetical protein
           SORBIDRAFT_06g014760 [Sorghum bicolor]
          Length = 478

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 35/78 (44%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
 Frame = +3

Query: 12  NSWGKNEKKLRPSPSPSESAGSKWGKNNTQKR----HENSWG--KQSTGSKSWSYRAMRG 173
           N+    E+KL  S S      + W KN+         EN WG  KQ+  + +WSYRA+R 
Sbjct: 398 NNTKDEERKLGKSES------TVWEKNDEPSDKVDVQENGWGTWKQNASTSAWSYRALRS 451

Query: 174 SALGPTMAMLRSKNDA*G 227
           SALGPTMAMLR KN   G
Sbjct: 452 SALGPTMAMLRGKNSQRG 469


>ref|XP_006357585.1| PREDICTED: DNA ligase 1-like [Solanum tuberosum]
          Length = 826

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
 Frame = +3

Query: 27  NEKKLRPSPSPS------ESAGSKWGKNNTQKRHENSWGKQSTGSKSWSYRAMRGSALGP 188
           N K+ R +PS +      E           +   E+SW K STG   WSYR MRG+ALGP
Sbjct: 756 NGKQTRSTPSENGGVNLWEQFSDTLKSKKAELAQESSWDKASTGKSPWSYRPMRGTALGP 815

Query: 189 TMAMLRSK 212
           TMA LRS+
Sbjct: 816 TMAFLRSQ 823


Top