BLASTX nr result

ID: Mentha25_contig00018834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00018834
         (410 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU22218.1| hypothetical protein MIMGU_mgv1a010790mg [Mimulus...   106   4e-21
gb|EYU17743.1| hypothetical protein MIMGU_mgv1a011024mg [Mimulus...    62   1e-07
ref|XP_006351431.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    60   4e-07
sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, c...    56   6e-06
gb|EPS64023.1| hypothetical protein M569_10758, partial [Genlise...    56   6e-06
ref|XP_004236291.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...    55   8e-06

>gb|EYU22218.1| hypothetical protein MIMGU_mgv1a010790mg [Mimulus guttatus]
          Length = 301

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/96 (55%), Positives = 74/96 (77%), Gaps = 7/96 (7%)
 Frame = +2

Query: 92  MAFAAKSLFKPVSMATNGCLTSLPSPF---KASYSHPSLSIPFRPITLRISCSYASSIPL 262
           M+F AK   KP SMATNGC TS+PS F   +ASYSHP+LSI F+P+  +++CSY+SSI L
Sbjct: 1   MSFVAKPALKPASMATNGCFTSVPSLFTTSRASYSHPNLSIRFKPVKFQLNCSYSSSISL 60

Query: 263 ----SLKRKESILRVSVIAAQQEEDIPIVLEEQLDG 358
               SLK+KE+++RVS+++A QEE  P+++EEQ +G
Sbjct: 61  PTFSSLKKKETLIRVSIVSALQEEGNPVLVEEQEEG 96


>gb|EYU17743.1| hypothetical protein MIMGU_mgv1a011024mg [Mimulus guttatus]
          Length = 294

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
 Frame = +2

Query: 92  MAFAAKSLFKPVSMATNGCLTSLPSPFKASYSHPSLSIPFRPITLRI--SCSYASSIPL- 262
           M+F+AK++  P SMATN CL S PS F  S       + ++PI  +   SC   SS+ L 
Sbjct: 1   MSFSAKAVLNPASMATNACLISSPSLFTGS------KVSYKPIKFQAASSCKNISSLSLH 54

Query: 263 ---SLKRKESILRVSVIAAQQEEDIPIVLEEQLDGE 361
              SL RK   LR+SV++AQ+E + P++LEE+ + E
Sbjct: 55  SFFSLTRK---LRLSVVSAQEEGNNPVILEEKEEEE 87


>ref|XP_006351431.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
           tuberosum]
          Length = 302

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
 Frame = +2

Query: 92  MAFAAKSLFKPVSMATNGCLTSLPSPFKASYSHPSLSIPFRPITLRISCSYASSIPLSLK 271
           M+   K L K +SMATN CLT LP  F  + S   +S P +PI+L  S S +SS  LSLK
Sbjct: 1   MSSLTKPLIKNLSMATNSCLT-LPPFFTTTKSMSFISTPLKPISLSSSFSSSSSF-LSLK 58

Query: 272 RKESILR--VSVIAAQQEEDIPIVLEEQLDGEE------FSLYEAPESDGGGGE 409
           +  +     VSV+AAQQ++D  + LE++  G E       S+ +A ESD    E
Sbjct: 59  KTTTQFPSIVSVVAAQQDDDSSVGLEDKEQGGESLSFDFASVGDAGESDEAEAE 112


>sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
           Precursor gi|19741|emb|CAA40364.1| 31kD chloroplast
           ribonucleoprotein [Nicotiana sylvestris]
           gi|19756|emb|CAA37885.1| unnamed protein product
           [Nicotiana sylvestris]
          Length = 315

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
 Frame = +2

Query: 92  MAFAAKSLFKPVSMATNGCLTSLPSPF-----KASYSHPSLSIPFRPI-TLRISCSYASS 253
           M+ A K + KP SMATN CL SLP  F       S+++P LS   +PI  L +SC+Y+  
Sbjct: 1   MSCATKPIIKPSSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIKLLHLSCTYSPC 60

Query: 254 IPLSLKRKESILRVSVIAAQQEEDIPIVLEEQ 349
           I LS K+K S      ++A QEE+  ++L+ Q
Sbjct: 61  I-LSPKKKTS------VSALQEEENTLILDGQ 85


>gb|EPS64023.1| hypothetical protein M569_10758, partial [Genlisea aurea]
          Length = 292

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
 Frame = +2

Query: 104 AKSLFKPVSMATNGCLTSLPSPFKASYSHPSLSIPFRP-ITLRISCSYASSIPLSLKR-- 274
           AKS  KP+SM T GC  S P+      S   +SIP  P I   +SCS ASS+   L++  
Sbjct: 1   AKSAMKPLSMPTAGCFISFPT------SIAFVSIPSNPTIKCNLSCSAASSLLPILRKQN 54

Query: 275 KESILRVSVIAAQQEEDIPIVLEEQLDGEEFSLYEAPESDGGGGE 409
           +E IL  + +AAQ+++  P++LE+Q     F+ +   ES  GG E
Sbjct: 55  QEPILGPTAVAAQRKDGNPVLLEDQEFEGNFN-WVGSESAAGGSE 98


>ref|XP_004236291.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
           lycopersicum]
          Length = 296

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
 Frame = +2

Query: 92  MAFAAKSLFKPVSMATNGCLTSLPSPFKASYSHPSLSIPFRPITLRISCSYASSIPLSLK 271
           M+   K L K +SMATN CL SLP  F  + S   +S P +PI+L      +SS+ L   
Sbjct: 1   MSSLTKPLIKNLSMATNSCLISLPPFFTTTKSMSFISTPLKPISL------SSSLSLKKT 54

Query: 272 RKESILRVSVIAAQQEEDIPIVLEEQLDGEE------FSLYEAPESDGGGGE 409
             +    VSV+AA Q++D  + LE++  G E       S+ +A ESD    E
Sbjct: 55  TTQFPSIVSVVAALQDDDSSVGLEDKEQGGEALSFDFASVGDAGESDEAEAE 106


Top