BLASTX nr result

ID: Mentha25_contig00018832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00018832
         (412 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU22218.1| hypothetical protein MIMGU_mgv1a010790mg [Mimulus...   107   1e-21
gb|EYU17743.1| hypothetical protein MIMGU_mgv1a011024mg [Mimulus...    67   2e-09
sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, c...    58   1e-06

>gb|EYU22218.1| hypothetical protein MIMGU_mgv1a010790mg [Mimulus guttatus]
          Length = 301

 Score =  107 bits (268), Expect = 1e-21
 Identities = 55/96 (57%), Positives = 74/96 (77%), Gaps = 7/96 (7%)
 Frame = -2

Query: 306 MAFAAKSLLKPVSMATNGCLTSLPSPF---KASYSHPSLSIAFRPIKLQISCTHASSIPL 136
           M+F AK  LKP SMATNGC TS+PS F   +ASYSHP+LSI F+P+K Q++C+++SSI L
Sbjct: 1   MSFVAKPALKPASMATNGCFTSVPSLFTTSRASYSHPNLSIRFKPVKFQLNCSYSSSISL 60

Query: 135 ----SLKRKEPISRVSVITAQQEEDIPIVLEEQLEG 40
               SLK+KE + RVS+++A QEE  P+++EEQ EG
Sbjct: 61  PTFSSLKKKETLIRVSIVSALQEEGNPVLVEEQEEG 96


>gb|EYU17743.1| hypothetical protein MIMGU_mgv1a011024mg [Mimulus guttatus]
          Length = 294

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 6/96 (6%)
 Frame = -2

Query: 306 MAFAAKSLLKPVSMATNGCLTSLPSPFKASYSHPSLSIAFRPIKLQI--SCTHASSIPL- 136
           M+F+AK++L P SMATN CL S PS F  S       ++++PIK Q   SC + SS+ L 
Sbjct: 1   MSFSAKAVLNPASMATNACLISSPSLFTGS------KVSYKPIKFQAASSCKNISSLSLH 54

Query: 135 ---SLKRKEPISRVSVITAQQEEDIPIVLEEQLEGE 37
              SL RK    R+SV++AQ+E + P++LEE+ E E
Sbjct: 55  SFFSLTRK---LRLSVVSAQEEGNNPVILEEKEEEE 87


>sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
           Precursor gi|19741|emb|CAA40364.1| 31kD chloroplast
           ribonucleoprotein [Nicotiana sylvestris]
           gi|19756|emb|CAA37885.1| unnamed protein product
           [Nicotiana sylvestris]
          Length = 315

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
 Frame = -2

Query: 306 MAFAAKSLLKPVSMATNGCLTSLPSPF-----KASYSHPSLSIAFRPIK-LQISCTHASS 145
           M+ A K ++KP SMATN CL SLP  F       S+++P LS   +PIK L +SCT++  
Sbjct: 1   MSCATKPIIKPSSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIKLLHLSCTYSPC 60

Query: 144 IPLSLKRKEPISRVSVITAQQEEDIPIVLEEQ 49
           I LS K+K  +S      A QEE+  ++L+ Q
Sbjct: 61  I-LSPKKKTSVS------ALQEEENTLILDGQ 85


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