BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00018246
         (569 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus...   310   1e-82
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...   300   2e-79
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   298   9e-79
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...   297   2e-78
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   296   3e-78
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...   286   2e-75
ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Popu...   285   8e-75
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]       282   5e-74
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...   281   9e-74
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              279   3e-73
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   279   3e-73
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   277   2e-72
emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]      273   3e-71
ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isof...   272   5e-71
ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isof...   272   5e-71
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof...   272   5e-71
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   268   1e-69
ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   268   1e-69
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   266   2e-69
ref|XP_006600527.1| PREDICTED: DNA-directed RNA polymerase 3B, c...   266   3e-69

>gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus guttatus]
          Length = 941

 Score =  310 bits (795), Expect = 1e-82
 Identities = 152/190 (80%), Positives = 165/190 (86%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDVRPAFRHIFKIA R PGQ+IVK+YG IECDPLVL GLDKTV+HMIIPYVPMLVPPK+
Sbjct: 319 PPDVRPAFRHIFKIATRLPGQTIVKRYGVIECDPLVLAGLDKTVKHMIIPYVPMLVPPKK 378

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYD+GGYLFLPSYLMRTHGSR QQDAV+ V  KQMQKVYEALDTLGNTKWRVN+RIL 
Sbjct: 379 WKGYDRGGYLFLPSYLMRTHGSRHQQDAVKTVTSKQMQKVYEALDTLGNTKWRVNKRILT 438

Query: 209 VVENLWAAGGDVAGLVNRENVPIPE-LLSDDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVEN+WAAGG++AGLVNRE++PIPE LLS+D KE            KINQERHSQRCD E
Sbjct: 439 VVENIWAAGGNIAGLVNREDIPIPELLLSEDMKEAKKWKWSVRKVKKINQERHSQRCDTE 498

Query: 32  LKLSVARNMK 3
           LKLSVAR MK
Sbjct: 499 LKLSVARKMK 508


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic;
           AltName: Full=NsRpoT-C; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 3;
           Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC
           RecName: Full=DNA-directed RNA polymerase 3A,
           chloroplastic; AltName: Full=NictaRpoT3-syl; AltName:
           Full=T7 bacteriophage-type single subunit RNA polymerase
           3A; Flags: Precursor gi|21425641|emb|CAC82576.3|
           phage-type RNA polymerase [Nicotiana sylvestris]
           gi|21425679|emb|CAC95027.2| plastid RNA polymerase
           [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 977

 Score =  300 bits (767), Expect = 2e-79
 Identities = 140/189 (74%), Positives = 166/189 (87%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPD+RPAFRH+F+IA R+PG+SIVKKYG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+
Sbjct: 356 PPDIRPAFRHVFRIATRDPGKSIVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKK 415

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           W+GYDKGGYLFLPSYLMRTHGSRRQQDAVR+VP KQMQ+VYEALDTLG+TKWRVN+RIL+
Sbjct: 416 WRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPTKQMQQVYEALDTLGSTKWRVNKRILS 475

Query: 209 VVENLWAAGGDVAGLVNRENVPIPELLSDDEKEIXXXXXXXXXXXKINQERHSQRCDVEL 30
           VVE++WA GG++AGLV+R++VPIPEL SDD  E+           KINQE HSQRCD EL
Sbjct: 476 VVESIWAGGGNIAGLVDRKDVPIPELHSDDIMEVKKWKWRVRKSKKINQELHSQRCDTEL 535

Query: 29  KLSVARNMK 3
           KLSVAR +K
Sbjct: 536 KLSVARKLK 544


>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Solanum tuberosum]
          Length = 1015

 Score =  298 bits (762), Expect = 9e-79
 Identities = 139/189 (73%), Positives = 166/189 (87%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPD+RPAFRH+F+IA R+PG++IVKKYG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+
Sbjct: 394 PPDIRPAFRHVFRIATRDPGKNIVKKYGVIECDPLVVVGVDRTVKQMMIPYVPMLVPPKK 453

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           W+GYDKGGYLFLPSYLMRTHGSRRQQDAVR+VP KQMQ+VYEALDTLG+TKWRVN+RIL+
Sbjct: 454 WRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALDTLGSTKWRVNKRILS 513

Query: 209 VVENLWAAGGDVAGLVNRENVPIPELLSDDEKEIXXXXXXXXXXXKINQERHSQRCDVEL 30
           VVE++WA GG++AGLV+R++VPIPEL SDD  E+           KINQE HSQRCD EL
Sbjct: 514 VVESIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAKKINQELHSQRCDTEL 573

Query: 29  KLSVARNMK 3
           KLSVAR +K
Sbjct: 574 KLSVARKLK 582


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic;
           AltName: Full=NictaRpoT3-tom; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 3B;
           Flags: Precursor gi|21425667|emb|CAC95021.2| chloroplast
           RNA polymerase [Nicotiana tabacum]
          Length = 977

 Score =  297 bits (760), Expect = 2e-78
 Identities = 141/190 (74%), Positives = 165/190 (86%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPD+RPAFRH+FKIA R+PG++IVKKYG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+
Sbjct: 355 PPDIRPAFRHVFKIATRDPGKNIVKKYGVIECDPLVVAGVDRTVKQMMIPYVPMLVPPKK 414

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           W+GYDKGGYLFLPSYLMRTHGSRRQQDAVR VP KQMQ+VYEALDTLG+TKWRVN+RILN
Sbjct: 415 WRGYDKGGYLFLPSYLMRTHGSRRQQDAVRGVPTKQMQQVYEALDTLGSTKWRVNKRILN 474

Query: 209 VVENLWAAGGDVAGLVNRENVPIPELL-SDDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVE++WA GG++AGLV+R++VPIPEL  SDD  E+           KINQE HSQRCD E
Sbjct: 475 VVESIWAGGGNIAGLVDRKDVPIPELSNSDDIMEVKKWKWKVRKSKKINQELHSQRCDTE 534

Query: 32  LKLSVARNMK 3
           LKLSVAR +K
Sbjct: 535 LKLSVARKLK 544


>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Solanum lycopersicum]
          Length = 1007

 Score =  296 bits (758), Expect = 3e-78
 Identities = 138/189 (73%), Positives = 165/189 (87%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPD+RPAFRH+F+IA R+PG++IVKKYG IECDPLV+ G+D+TV+ M+IPYVPMLVPPK+
Sbjct: 386 PPDIRPAFRHVFRIATRDPGKNIVKKYGVIECDPLVVVGVDRTVKQMMIPYVPMLVPPKK 445

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           W+GYDKGGYLFLPSYLMRTHGSRRQQDAVR+VP KQMQ+VYEALDTLG+TKWRVN+RIL+
Sbjct: 446 WRGYDKGGYLFLPSYLMRTHGSRRQQDAVRSVPAKQMQQVYEALDTLGSTKWRVNKRILS 505

Query: 209 VVENLWAAGGDVAGLVNRENVPIPELLSDDEKEIXXXXXXXXXXXKINQERHSQRCDVEL 30
           VVE +WA GG++AGLV+R++VPIPEL SDD  E+           KINQE HSQRCD EL
Sbjct: 506 VVETIWAGGGNIAGLVDRKDVPIPELHSDDIMELKRWKWRVRKAKKINQELHSQRCDTEL 565

Query: 29  KLSVARNMK 3
           KLSVAR ++
Sbjct: 566 KLSVARKLR 574


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 882

 Score =  286 bits (733), Expect = 2e-75
 Identities = 138/190 (72%), Positives = 158/190 (83%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDVRPAFRHIFK   + PGQ IVKKYG IECDPL+L GLD T +HM+IPY PMLVPPK+
Sbjct: 260 PPDVRPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKK 319

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYDKGG+LFLPSY+MRTHGSR+QQ AVR+VP KQMQKV+EALDTLGNTKWRVNRR+L+
Sbjct: 320 WKGYDKGGHLFLPSYVMRTHGSRQQQVAVRSVPGKQMQKVFEALDTLGNTKWRVNRRLLD 379

Query: 209 VVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVE +W +GG++AGLV+RE++PIPE   SDD  EI           KINQERHSQRCD E
Sbjct: 380 VVERIWTSGGNIAGLVDREDIPIPEKPSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTE 439

Query: 32  LKLSVARNMK 3
           LKLSVAR +K
Sbjct: 440 LKLSVARKLK 449


>ref|XP_002308414.1| hypothetical protein POPTR_0006s19490g [Populus trichocarpa]
           gi|222854390|gb|EEE91937.1| hypothetical protein
           POPTR_0006s19490g [Populus trichocarpa]
          Length = 982

 Score =  285 bits (728), Expect = 8e-75
 Identities = 137/190 (72%), Positives = 157/190 (82%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDVRPAFRHIFK   + PGQ  VKKYG IECDPL+L GLD T +HM+IPY PMLVPPK+
Sbjct: 360 PPDVRPAFRHIFKSVTKNPGQKTVKKYGVIECDPLILTGLDGTAKHMLIPYFPMLVPPKK 419

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           W+GYDKGG+LFLPSY+MRTHGSR+QQDAVR+VP KQMQKV+EALDTLGNTKWRVN ++L+
Sbjct: 420 WRGYDKGGHLFLPSYIMRTHGSRQQQDAVRSVPGKQMQKVFEALDTLGNTKWRVNGKVLD 479

Query: 209 VVENLWAAGGDVAGLVNRENVPIPE-LLSDDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVE +WA+GG+ AGLVNR ++PIPE L SDD  EI           KINQERHSQRCD E
Sbjct: 480 VVERIWASGGNNAGLVNRGDIPIPEKLSSDDLTEIQKWKWSVRKAKKINQERHSQRCDTE 539

Query: 32  LKLSVARNMK 3
           LKLSVAR +K
Sbjct: 540 LKLSVARKLK 549


>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
          Length = 952

 Score =  282 bits (721), Expect = 5e-74
 Identities = 131/189 (69%), Positives = 157/189 (83%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDVRPAFRH FKIA REP Q++V++YG IECDPL+L G +  V+HM++P++PML+PPK+
Sbjct: 331 PPDVRPAFRHFFKIATREPRQTVVRRYGVIECDPLILDGFESNVKHMMVPHIPMLIPPKK 390

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYDKGGYLFLPSY+MRTHGSRRQQDAV+ V  ++MQKV+EALDTLGNTKWRVN+ IL+
Sbjct: 391 WKGYDKGGYLFLPSYVMRTHGSRRQQDAVKTVSPRKMQKVFEALDTLGNTKWRVNKSILS 450

Query: 209 VVENLWAAGGDVAGLVNRENVPIPELLSDDEKEIXXXXXXXXXXXKINQERHSQRCDVEL 30
           VVE++WAAGG++AGLVNRE+VP+PEL SDD  EI           K N E HS RCD EL
Sbjct: 451 VVEDIWAAGGNIAGLVNREDVPLPELHSDDPIEIKKWKFSIRKAKKNNMEMHSLRCDTEL 510

Query: 29  KLSVARNMK 3
           KLSVAR MK
Sbjct: 511 KLSVARAMK 519


>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
           gi|462398756|gb|EMJ04424.1| hypothetical protein
           PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score =  281 bits (719), Expect = 9e-74
 Identities = 135/190 (71%), Positives = 157/190 (82%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDVRPAFRH FK  A+ PGQ IVK YG IECDPLVL GLDKT +HM+IPYVPMLVPPKR
Sbjct: 354 PPDVRPAFRHRFKAVAKSPGQKIVKNYGVIECDPLVLTGLDKTAKHMLIPYVPMLVPPKR 413

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYDKGG+LFLPSY+MRTHGSR+Q DA+R +   QMQKV+EALD LG+TKWRVN+++L+
Sbjct: 414 WKGYDKGGHLFLPSYVMRTHGSRKQVDAMRNISRNQMQKVFEALDMLGSTKWRVNKKVLS 473

Query: 209 VVENLWAAGGDVAGLVNRENVPIPELL-SDDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVE++WA GG++AGLVNRE+VP+P+   S+D KEI           KINQERHSQRCD E
Sbjct: 474 VVESIWARGGNIAGLVNREDVPVPDKSPSEDLKEIQEWKWSVRKAKKINQERHSQRCDTE 533

Query: 32  LKLSVARNMK 3
           LKLSVAR MK
Sbjct: 534 LKLSVARKMK 543


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  279 bits (714), Expect = 3e-73
 Identities = 132/190 (69%), Positives = 157/190 (82%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDVRPAFRH FK   +E GQ   +KYG IECDPLVL GLD+T +HM+IPYVPML+PPK+
Sbjct: 186 PPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKK 245

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYDKGGYLFLPSY+MRTHGSR+QQDAV++VP +Q+QKV+EALDTLGNTKWR+NRR+L+
Sbjct: 246 WKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLS 305

Query: 209 VVENLWAAGGDVAGLVNRENVPIPELLS-DDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVE++WA GG++ GLV+RENVP+PE  S +D  EI           KINQERHS RCD E
Sbjct: 306 VVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTE 365

Query: 32  LKLSVARNMK 3
           +KLSVAR MK
Sbjct: 366 IKLSVARKMK 375


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
           vinifera]
          Length = 979

 Score =  279 bits (714), Expect = 3e-73
 Identities = 132/190 (69%), Positives = 157/190 (82%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDVRPAFRH FK   +E GQ   +KYG IECDPLVL GLD+T +HM+IPYVPML+PPK+
Sbjct: 357 PPDVRPAFRHTFKTVTKESGQKDWRKYGVIECDPLVLIGLDRTAKHMVIPYVPMLIPPKK 416

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYDKGGYLFLPSY+MRTHGSR+QQDAV++VP +Q+QKV+EALDTLGNTKWR+NRR+L+
Sbjct: 417 WKGYDKGGYLFLPSYVMRTHGSRKQQDAVKSVPRRQLQKVFEALDTLGNTKWRINRRVLS 476

Query: 209 VVENLWAAGGDVAGLVNRENVPIPELLS-DDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVE++WA GG++ GLV+RENVP+PE  S +D  EI           KINQERHS RCD E
Sbjct: 477 VVESIWARGGNLGGLVDRENVPLPEKPSTEDLTEIQNWKWNARKAKKINQERHSLRCDTE 536

Query: 32  LKLSVARNMK 3
           +KLSVAR MK
Sbjct: 537 IKLSVARKMK 546


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 973

 Score =  277 bits (708), Expect = 2e-72
 Identities = 131/190 (68%), Positives = 156/190 (82%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDVRPAFRH  K AA+ PGQ +VK YG IECDPLVL GLDKT +HM+IPYVPMLVPPKR
Sbjct: 351 PPDVRPAFRHRLKAAAKSPGQKLVKNYGVIECDPLVLAGLDKTAKHMLIPYVPMLVPPKR 410

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYDKGG+LFLPSY+MRTHGSR+Q D +R +  +QMQKV+EALD LG+TKWR+N+++LN
Sbjct: 411 WKGYDKGGHLFLPSYVMRTHGSRKQVDTMRNISGRQMQKVFEALDMLGSTKWRINKKVLN 470

Query: 209 VVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVE++WA GG++AGLV+RE+VP+PE   S+D  EI           K+NQERHSQRCD E
Sbjct: 471 VVESIWARGGNIAGLVDREDVPVPEKPPSEDPTEIQEWRWSARKAKKLNQERHSQRCDTE 530

Query: 32  LKLSVARNMK 3
           LKLSVAR MK
Sbjct: 531 LKLSVARRMK 540


>emb|CAC80139.1| DNA-dependent RNA polymerase [Spinacia oleracea]
          Length = 989

 Score =  273 bits (697), Expect = 3e-71
 Identities = 128/190 (67%), Positives = 157/190 (82%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDVRPAFRH FKI   E GQ +VK+YG IECDPLVL G+D++ R+MIIPYVPML+PPK 
Sbjct: 367 PPDVRPAFRHKFKILNNELGQQVVKRYGVIECDPLVLKGIDRSARYMIIPYVPMLIPPKN 426

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYDKGGYLFLPSY+MRTHGSR+QQDA+R  P +QMQKV+EAL+TLG+TKWR+NR++L 
Sbjct: 427 WKGYDKGGYLFLPSYVMRTHGSRKQQDAMRKTPPQQMQKVFEALNTLGHTKWRINRKVLG 486

Query: 209 VVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVENLWA+GG++ GLVN ++VP+PE  L++D  EI           KIN+ERH+ RCDVE
Sbjct: 487 VVENLWASGGNIGGLVNCDDVPLPEKPLTEDPAEIDTWKWSVRKAKKINRERHALRCDVE 546

Query: 32  LKLSVARNMK 3
           LK+SVA+ MK
Sbjct: 547 LKISVAQKMK 556


>ref|XP_007013879.1| DNA/RNA polymerases superfamily protein isoform 3 [Theobroma cacao]
           gi|508784242|gb|EOY31498.1| DNA/RNA polymerases
           superfamily protein isoform 3 [Theobroma cacao]
          Length = 927

 Score =  272 bits (695), Expect = 5e-71
 Identities = 125/190 (65%), Positives = 160/190 (84%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDV+PAFRH FK  +++PG+ ++K+YG IECDPL+L GLD++ +HM+IPYVPMLVPPK+
Sbjct: 356 PPDVQPAFRHKFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKK 415

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYDKGGYLFLPSY+MRTHGSR+QQDA++ V VK+MQKV+EALDTLG+TKWRVN+++L 
Sbjct: 416 WKGYDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLA 475

Query: 209 VVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVE++WA+GG++AGLV+R ++PIPE   S+D  E            KIN+ERHSQRCD E
Sbjct: 476 VVESIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTE 535

Query: 32  LKLSVARNMK 3
           LKLSVAR M+
Sbjct: 536 LKLSVARKME 545


>ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
           gi|508784241|gb|EOY31497.1| DNA/RNA polymerases
           superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score =  272 bits (695), Expect = 5e-71
 Identities = 125/190 (65%), Positives = 160/190 (84%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDV+PAFRH FK  +++PG+ ++K+YG IECDPL+L GLD++ +HM+IPYVPMLVPPK+
Sbjct: 234 PPDVQPAFRHKFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKK 293

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYDKGGYLFLPSY+MRTHGSR+QQDA++ V VK+MQKV+EALDTLG+TKWRVN+++L 
Sbjct: 294 WKGYDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLA 353

Query: 209 VVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVE++WA+GG++AGLV+R ++PIPE   S+D  E            KIN+ERHSQRCD E
Sbjct: 354 VVESIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTE 413

Query: 32  LKLSVARNMK 3
           LKLSVAR M+
Sbjct: 414 LKLSVARKME 423


>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
           gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
           superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score =  272 bits (695), Expect = 5e-71
 Identities = 125/190 (65%), Positives = 160/190 (84%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDV+PAFRH FK  +++PG+ ++K+YG IECDPL+L GLD++ +HM+IPYVPMLVPPK+
Sbjct: 356 PPDVQPAFRHKFKTISKDPGKKMMKRYGVIECDPLILSGLDRSAKHMLIPYVPMLVPPKK 415

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYDKGGYLFLPSY+MRTHGSR+QQDA++ V VK+MQKV+EALDTLG+TKWRVN+++L 
Sbjct: 416 WKGYDKGGYLFLPSYVMRTHGSRKQQDALKGVHVKKMQKVFEALDTLGSTKWRVNKKVLA 475

Query: 209 VVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVE++WA+GG++AGLV+R ++PIPE   S+D  E            KIN+ERHSQRCD E
Sbjct: 476 VVESIWASGGNIAGLVDRNDIPIPEKPSSEDSTESQEWKWSVRKANKINRERHSQRCDTE 535

Query: 32  LKLSVARNMK 3
           LKLSVAR M+
Sbjct: 536 LKLSVARKME 545


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Cucumis sativus]
          Length = 975

 Score =  268 bits (684), Expect = 1e-69
 Identities = 127/189 (67%), Positives = 152/189 (80%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPD+RPAF H FK  A+ PGQ+ VKKYG +ECDP+VL GLD+T +HM+IPY+PMLVPPK+
Sbjct: 354 PPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKK 413

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYDKGG+ FLPSY+MRTHGS RQQDA++ +  KQMQKV+EALD LG+TKWRVNR +L+
Sbjct: 414 WKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLS 473

Query: 209 VVENLWAAGGDVAGLVNRENVPIPELLSDDEKEIXXXXXXXXXXXKINQERHSQRCDVEL 30
           VVE+LWA GG+ AGLV+R++VPIPE    D  E+           KINQE HSQRCDVEL
Sbjct: 474 VVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVEL 533

Query: 29  KLSVARNMK 3
           KLSVAR MK
Sbjct: 534 KLSVARKMK 542


>ref|XP_004144791.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Cucumis sativus]
          Length = 975

 Score =  268 bits (684), Expect = 1e-69
 Identities = 127/189 (67%), Positives = 152/189 (80%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPD+RPAF H FK  A+ PGQ+ VKKYG +ECDP+VL GLD+T +HM+IPY+PMLVPPK+
Sbjct: 354 PPDIRPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHMLIPYIPMLVPPKK 413

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGYDKGG+ FLPSY+MRTHGS RQQDA++ +  KQMQKV+EALD LG+TKWRVNR +L+
Sbjct: 414 WKGYDKGGHFFLPSYVMRTHGSSRQQDAMKNISGKQMQKVFEALDMLGSTKWRVNRSVLS 473

Query: 209 VVENLWAAGGDVAGLVNRENVPIPELLSDDEKEIXXXXXXXXXXXKINQERHSQRCDVEL 30
           VVE+LWA GG+ AGLV+R++VPIPE    D  E+           KINQE HSQRCDVEL
Sbjct: 474 VVESLWAQGGNTAGLVDRKDVPIPEKPLGDLTEMQEWRWSMKKAKKINQELHSQRCDVEL 533

Query: 29  KLSVARNMK 3
           KLSVAR MK
Sbjct: 534 KLSVARKMK 542


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Citrus sinensis]
          Length = 1009

 Score =  266 bits (681), Expect = 2e-69
 Identities = 124/190 (65%), Positives = 156/190 (82%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPDVRPAFRH FK   + PGQ   K+YG +ECDPLVL GLD++ +HM+IPYVPMLVPPK+
Sbjct: 387 PPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLAGLDRSAKHMLIPYVPMLVPPKK 446

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGY+KGGYLFLPSY+MRTHGSR+QQ+A+++V    M+KV+EALDTLG+TKWRVN+++L+
Sbjct: 447 WKGYNKGGYLFLPSYVMRTHGSRKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLS 506

Query: 209 VVENLWAAGGDVAGLVNRENVPIPEL-LSDDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           V+E++W +GG++AGLV+R +VPIPE  LS+D  E+           KINQERHSQRCD E
Sbjct: 507 VLESIWVSGGNIAGLVDRNDVPIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQRCDTE 566

Query: 32  LKLSVARNMK 3
           LKLSVAR MK
Sbjct: 567 LKLSVARRMK 576


>ref|XP_006600527.1| PREDICTED: DNA-directed RNA polymerase 3B, chloroplastic-like
           isoform X7 [Glycine max]
          Length = 773

 Score =  266 bits (680), Expect = 3e-69
 Identities = 126/190 (66%), Positives = 155/190 (81%), Gaps = 1/190 (0%)
 Frame = -1

Query: 569 PPDVRPAFRHIFKIAAREPGQSIVKKYGAIECDPLVLHGLDKTVRHMIIPYVPMLVPPKR 390
           PPD+RPAFRH FK  ++ P Q I+K YG IECDPLVL G+DK+V+HM++PY+PMLVPPK+
Sbjct: 328 PPDIRPAFRHKFKAISKNPEQKILKNYGVIECDPLVLAGMDKSVKHMLMPYMPMLVPPKK 387

Query: 389 WKGYDKGGYLFLPSYLMRTHGSRRQQDAVRAVPVKQMQKVYEALDTLGNTKWRVNRRILN 210
           WKGY+KGG+LFLPSY+MRTHGS++QQD ++ V  KQMQKV+EALDTLGNTKWRVNRR+LN
Sbjct: 388 WKGYEKGGHLFLPSYIMRTHGSKKQQDVMKNVERKQMQKVFEALDTLGNTKWRVNRRLLN 447

Query: 209 VVENLWAAGGDVAGLVNRENVPIPELLS-DDEKEIXXXXXXXXXXXKINQERHSQRCDVE 33
           VVE+LWA GG++AGL++R++VPIPE     D K+I           KIN ERHS RCD E
Sbjct: 448 VVESLWAGGGNIAGLIDRKDVPIPERPPLGDLKQIQEWKWSVRKAEKINLERHSLRCDTE 507

Query: 32  LKLSVARNMK 3
           LKLSVA+ MK
Sbjct: 508 LKLSVAQKMK 517