BLASTX nr result

ID: Mentha25_contig00014905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00014905
         (1088 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_042284.1| hypothetical protein SYNVgp5 [Sonchus yellow ne...   126   1e-26

>ref|NP_042284.1| hypothetical protein SYNVgp5 [Sonchus yellow net virus]
           gi|133693|sp|P21299.1|PHOSP_SYNV RecName:
           Full=Phosphoprotein; Short=Protein P; AltName:
           Full=Protein M1 gi|335142|gb|AAA47897.1| M1 protein
           [Sonchus yellow net virus] gi|484034|gb|AAA50383.1|
           putative [Sonchus yellow net virus]
          Length = 286

 Score =  126 bits (317), Expect = 1e-26
 Identities = 68/230 (29%), Positives = 121/230 (52%), Gaps = 10/230 (4%)
 Frame = -2

Query: 967 SMKGFINVSFGSTKQQIDTNKLWKIMGHILDLNPKKIEMFFSSTRQAHDRKSMVSSEDNI 788
           S+KG  +  F   +++I T ++W++M  I+ L P ++ M +S  R A D+   ++ E+  
Sbjct: 8   SIKGHASAIFNRQEKEISTGRVWEVMKKIMSLKPTRVIMSYSLLRSALDKSRQLTQEE-Y 66

Query: 787 KMMQCMIKGCIETTKSQYTCCRSTTLWLGSCYQYGFTFGISSSDTGHITMVIPLPGNVMG 608
            +MQ ++ GC++T +          + LG C ++   FGI+++D GH+++V+ LP    G
Sbjct: 67  NIMQLILDGCVKTLEPVAASGICIDVNLGKCTKHTIPFGITNNDVGHVSVVMTLPFLEEG 126

Query: 607 CYQIKACFNGKLGR-KTSRELYSFNMDLEVYIGKLSKDEYTTCIRDGYPVYPLKKEHPEL 431
           CY I ACF+G+L + ++    Y+ ++ LE+Y+  LS+DE    I  G  VYP K  HP  
Sbjct: 127 CYNIGACFDGRLSKSRSDASHYAVDVSLEIYLKSLSRDEAEEQISKGTSVYPFKINHPTY 186

Query: 430 FPEDSDSDSGWTTD---------QSGGXXXXXXXXXXXKARTVSTRKNKK 308
           F +++D+  G +           + GG             + V  RK++K
Sbjct: 187 FEDETDTSDGESLSGRASSDDGPEDGGHGHGDKNNEKNSGKVVRKRKSRK 236


Top