BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00013497
         (446 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU42502.1| hypothetical protein MIMGU_mgv1a001452mg [Mimulus...   276   3e-72
emb|CBI15105.3| unnamed protein product [Vitis vinifera]              275   5e-72
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi...   275   5e-72
ref|XP_004508810.1| PREDICTED: pentatricopeptide repeat-containi...   273   1e-71
ref|XP_007210369.1| hypothetical protein PRUPE_ppa001337mg [Prun...   270   1e-70
ref|XP_007155373.1| hypothetical protein PHAVU_003G195800g [Phas...   269   3e-70
ref|XP_006600662.1| PREDICTED: pentatricopeptide repeat-containi...   267   1e-69
ref|XP_006579551.1| PREDICTED: pentatricopeptide repeat-containi...   267   1e-69
ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containi...   267   1e-69
ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containi...   267   1e-69
gb|EXB29767.1| hypothetical protein L484_008930 [Morus notabilis]     266   2e-69
ref|XP_006344988.1| PREDICTED: pentatricopeptide repeat-containi...   265   5e-69
ref|XP_004236160.1| PREDICTED: pentatricopeptide repeat-containi...   265   5e-69
ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containi...   263   2e-68
ref|XP_002511477.1| pentatricopeptide repeat-containing protein,...   262   4e-68
ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Popu...   261   9e-68
ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3...   260   2e-67
ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2...   260   2e-67
ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1...   260   2e-67
ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containi...   257   1e-66

>gb|EYU42502.1| hypothetical protein MIMGU_mgv1a001452mg [Mimulus guttatus]
          Length = 816

 Score =  276 bits (705), Expect = 3e-72
 Identities = 133/145 (91%), Positives = 141/145 (97%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           VFRQMQ AGC+PNAGTYSILL+LFGK+GRYDEVR+LFLEMKVSNTEPDADTYNILIEVFG
Sbjct: 298 VFRQMQGAGCIPNAGTYSILLSLFGKNGRYDEVRELFLEMKVSNTEPDADTYNILIEVFG 357

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           EGGYFKEVVTLFHDM+EE VEPNMETYEGLIY+CGKGGLHEDAKRIL HM+EKGLVPS K
Sbjct: 358 EGGYFKEVVTLFHDMVEENVEPNMETYEGLIYSCGKGGLHEDAKRILLHMSEKGLVPSCK 417

Query: 370 AYTGVIEAYGQAALYEEALVAFNTM 444
           AYTGVIE+YGQAALYEEALVAFNTM
Sbjct: 418 AYTGVIESYGQAALYEEALVAFNTM 442



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   YS+++ + G+ G  D+  ++F EM   +      +Y  +I
Sbjct: 124 SLRLFKYMQRQIWCKPNEHIYSLIIGILGREGLLDKSAEIFDEMAAHSVARTVLSYTAII 183

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLV 357
             +G  G ++  + L      E ++P++ TY  L+ AC   GL ++A+ +   MNE G++
Sbjct: 184 NAYGRNGQYEVAMELL-----ERMKPDLVTYNTLLSACSNRGLGDEAEMVFRTMNESGVL 238

Query: 358 PSAKAYTGVIEAYGQAALYEE 420
           P    Y+ +++ +G+    E+
Sbjct: 239 PDITTYSYLVDTFGKLEKLEK 259



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/145 (27%), Positives = 68/145 (46%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +F +M          +Y+ ++N +G++G+Y+   +L   MK     PD  TYN L+    
Sbjct: 163 IFDEMAAHSVARTVLSYTAIINAYGRNGQYEVAMELLERMK-----PDLVTYNTLLSACS 217

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
             G   E   +F  M E  V P++ TY  L+   GK    E    +L  M  +G +P   
Sbjct: 218 NRGLGDEAEMVFRTMNESGVLPDITTYSYLVDTFGKLEKLEKVSELLGEMEAEGNLPEIM 277

Query: 370 AYTGVIEAYGQAALYEEALVAFNTM 444
           +Y  +++AY  +   +E++V F  M
Sbjct: 278 SYNVLLDAYAHSGKIKESMVVFRQM 302



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 39/148 (26%), Positives = 69/148 (46%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL  F  M   G +P   TY+ L++ F K G Y E   +   M       + D+ N +IE
Sbjct: 435 ALVAFNTMNEVGSMPTIETYNSLIHSFAKGGLYKESEAILSRMSELGVPRNRDSLNGVIE 494

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            + +GG F+E +  + +M +   +P+  T E ++      GL ++++     + E G+ P
Sbjct: 495 AYRQGGQFEEAIKAYVNMEKVRCDPDEYTLEAVLSVYCFVGLVDESEEQFRQIKELGIQP 554

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S   Y  ++  Y +A  ++ A    N M
Sbjct: 555 SVMCYCMMLAVYAKADRWDMANELLNEM 582



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 37/134 (27%), Positives = 63/134 (47%)
 Frame = +1

Query: 43  PNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFGEGGYFKEVVTL 222
           P+  TY+ LL+     G  DE   +F  M  S   PD  TY+ L++ FG+    ++V  L
Sbjct: 204 PDLVTYNTLLSACSNRGLGDEAEMVFRTMNESGVLPDITTYSYLVDTFGKLEKLEKVSEL 263

Query: 223 FHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAKAYTGVIEAYGQ 402
             +M  E   P + +Y  L+ A    G  +++  +   M   G +P+A  Y+ ++  +G+
Sbjct: 264 LGEMEAEGNLPEIMSYNVLLDAYAHSGKIKESMVVFRQMQGAGCIPNAGTYSILLSLFGK 323

Query: 403 AALYEEALVAFNTM 444
              Y+E    F  M
Sbjct: 324 NGRYDEVRELFLEM 337



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 38/138 (27%), Positives = 62/138 (44%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G VP+   Y+ ++  +G+   Y+E    F  M    + P  +TYN LI  F 
Sbjct: 403 ILLHMSEKGLVPSCKAYTGVIESYGQAALYEEALVAFNTMNEVGSMPTIETYNSLIHSFA 462

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           +GG +KE   +   M E  V  N ++  G+I A  +GG  E+A +   +M +    P   
Sbjct: 463 KGGLYKESEAILSRMSELGVPRNRDSLNGVIEAYRQGGQFEEAIKAYVNMEKVRCDPDEY 522

Query: 370 AYTGVIEAYGQAALYEEA 423
               V+  Y    L +E+
Sbjct: 523 TLEAVLSVYCFVGLVDES 540


>emb|CBI15105.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  275 bits (703), Expect = 5e-72
 Identities = 132/148 (89%), Positives = 142/148 (95%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+GVFRQMQ AGCVPNA TYSILLNL+G+HGRYD+VRDLFLEMKVSNTEP+A TYNILI 
Sbjct: 99  AMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILIN 158

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE VEPNMETYEGLI+ACGKGGLHEDAK+IL HMNEKG+VP
Sbjct: 159 VFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVP 218

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+KAYTGVIEAYGQAALYEEALVAFNTM
Sbjct: 219 SSKAYTGVIEAYGQAALYEEALVAFNTM 246



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/141 (29%), Positives = 72/141 (51%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL  F  M   G  P   TY+ L+ +F K G Y E   + L+M  S    + DT+N +IE
Sbjct: 239 ALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIE 298

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            F +GG F+E +  + +M +   +P+ +T E ++      GL E+++     +   G++P
Sbjct: 299 AFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILP 358

Query: 361 SAKAYTGVIEAYGQAALYEEA 423
           S   Y  ++  Y +A  +++A
Sbjct: 359 SVMCYCMMLAVYAKADRWDDA 379



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/138 (28%), Positives = 68/138 (49%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G VP++  Y+ ++  +G+   Y+E    F  M    ++P  +TYN LI++F 
Sbjct: 207 ILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFA 266

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           +GG +KE   +   M +  V  N +T+ G+I A  +GG  E+A +    M +    P  +
Sbjct: 267 KGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQ 326

Query: 370 AYTGVIEAYGQAALYEEA 423
               V+  Y  A L EE+
Sbjct: 327 TLEAVLSVYCFAGLVEES 344



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 39/141 (27%), Positives = 66/141 (46%)
 Frame = +1

Query: 22  MQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFGEGGY 201
           M+  G   +  TY+ LL+   + G  DE   +F  M      PD  TY+ L+E FG+   
Sbjct: 1   MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60

Query: 202 FKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAKAYTG 381
            ++V  L  +M      P++ +Y  L+ A  + G  ++A  +   M   G VP+A  Y+ 
Sbjct: 61  LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSI 120

Query: 382 VIEAYGQAALYEEALVAFNTM 444
           ++  YG+   Y++    F  M
Sbjct: 121 LLNLYGRHGRYDDVRDLFLEM 141


>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic [Vitis vinifera]
          Length = 869

 Score =  275 bits (703), Expect = 5e-72
 Identities = 132/148 (89%), Positives = 142/148 (95%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+GVFRQMQ AGCVPNA TYSILLNL+G+HGRYD+VRDLFLEMKVSNTEP+A TYNILI 
Sbjct: 341 AMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILIN 400

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE VEPNMETYEGLI+ACGKGGLHEDAK+IL HMNEKG+VP
Sbjct: 401 VFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVP 460

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+KAYTGVIEAYGQAALYEEALVAFNTM
Sbjct: 461 SSKAYTGVIEAYGQAALYEEALVAFNTM 488



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 41/141 (29%), Positives = 72/141 (51%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL  F  M   G  P   TY+ L+ +F K G Y E   + L+M  S    + DT+N +IE
Sbjct: 481 ALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIE 540

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            F +GG F+E +  + +M +   +P+ +T E ++      GL E+++     +   G++P
Sbjct: 541 AFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILP 600

Query: 361 SAKAYTGVIEAYGQAALYEEA 423
           S   Y  ++  Y +A  +++A
Sbjct: 601 SVMCYCMMLAVYAKADRWDDA 621



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y+I++ + G+ G  ++ +++F EM      P   ++  LI
Sbjct: 129 SLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALI 188

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G +K  + L   M +E V P++ TY  +I +C +GGL  E+   +   M  +G+
Sbjct: 189 NAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGI 248

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
                 Y  ++ A  +  L +EA + F TM
Sbjct: 249 QADIVTYNTLLSACARRGLGDEAEMVFRTM 278



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 43/147 (29%), Positives = 71/147 (48%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F QM+  G   +  TY+ LL+   + G  DE   +F  M      PD  TY+ L+E 
Sbjct: 237 LGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVET 296

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+    ++V  L  +M      P++ +Y  L+ A  + G  ++A  +   M   G VP+
Sbjct: 297 FGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPN 356

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 357 AATYSILLNLYGRHGRYDDVRDLFLEM 383



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/138 (28%), Positives = 68/138 (49%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G VP++  Y+ ++  +G+   Y+E    F  M    ++P  +TYN LI++F 
Sbjct: 449 ILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFA 508

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           +GG +KE   +   M +  V  N +T+ G+I A  +GG  E+A +    M +    P  +
Sbjct: 509 KGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQ 568

Query: 370 AYTGVIEAYGQAALYEEA 423
               V+  Y  A L EE+
Sbjct: 569 TLEAVLSVYCFAGLVEES 586



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGR-YDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +  +M+     P+  TY+ ++N   + G  ++E+  LF +M+    + D  TYN L+
Sbjct: 200 SLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIVTYNTLL 259

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLV 357
                 G   E   +F  M E  + P++ TY  L+   GK    E    +L  M   G  
Sbjct: 260 SACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSF 319

Query: 358 PSAKAYTGVIEAYGQAALYEEALVAFNTM 444
           P   +Y  ++EA+ Q+   +EA+  F  M
Sbjct: 320 PDITSYNVLLEAHAQSGSIKEAMGVFRQM 348


>ref|XP_004508810.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cicer arietinum]
          Length = 861

 Score =  273 bits (699), Expect = 1e-71
 Identities = 130/148 (87%), Positives = 143/148 (96%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+GVFRQMQ AGCVPNA TYSILLNL+GKHGRYD+VRDLFLEMKVSNT+PDA TYNILI+
Sbjct: 333 AIGVFRQMQGAGCVPNAATYSILLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQ 392

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM++E VEPNMETYEGLI+ACGKGGL+EDAK+IL HMNE+G+VP
Sbjct: 393 VFGEGGYFKEVVTLFHDMVDENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNERGVVP 452

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+KAYTGVIEAYGQAALYEEALVAFNTM
Sbjct: 453 SSKAYTGVIEAYGQAALYEEALVAFNTM 480



 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 47/145 (32%), Positives = 75/145 (51%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           VFR M   G VP+  TYS L++ FGK  + ++V +L  EM+     PD  +YN+L+E + 
Sbjct: 266 VFRTMNEGGVVPDINTYSYLVHTFGKLNKLEKVSELLREMESGGNLPDVSSYNVLLEAYA 325

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           E G  K+ + +F  M      PN  TY  L+   GK G ++D + +   M      P A 
Sbjct: 326 ESGSIKDAIGVFRQMQGAGCVPNAATYSILLNLYGKHGRYDDVRDLFLEMKVSNTDPDAG 385

Query: 370 AYTGVIEAYGQAALYEEALVAFNTM 444
            Y  +I+ +G+   ++E +  F+ M
Sbjct: 386 TYNILIQVFGEGGYFKEVVTLFHDM 410



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y+I++ L G+ G  D+ R++F EM           Y  +I
Sbjct: 121 SLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSQGVPRSVFAYTAVI 180

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G F+  V L   M +E V P++ TY  +I AC +GGL  E    +   M  +G+
Sbjct: 181 NAYGRNGQFQTSVELLDRMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 240

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 241 QPDVITYNTLLSACAHRGLGDEAEMVFRTM 270



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 43/147 (29%), Positives = 71/147 (48%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL+     G  DE   +F  M      PD +TY+ L+  
Sbjct: 229 LGLFAEMRHEGIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSYLVHT 288

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+    ++V  L  +M      P++ +Y  L+ A  + G  +DA  +   M   G VP+
Sbjct: 289 FGKLNKLEKVSELLREMESGGNLPDVSSYNVLLEAYAESGSIKDAIGVFRQMQGAGCVPN 348

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 349 AATYSILLNLYGKHGRYDDVRDLFLEM 375



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/138 (25%), Positives = 63/138 (45%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G VP++  Y+ ++  +G+   Y+E    F  M    + P  +TYN L+  F 
Sbjct: 441 ILLHMNERGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSNPTVETYNSLVRSFA 500

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
            GG +KEV  +   M E  +  ++ ++ G+I A  + G +E+A +    M +        
Sbjct: 501 RGGLYKEVEAILFRMGESGLPRDVHSFNGVIEALRQAGQYEEAVKAHVEMEKANCDYDES 560

Query: 370 AYTGVIEAYGQAALYEEA 423
               V+  Y  A L +E+
Sbjct: 561 TLEAVLSIYCAAGLVDES 578


>ref|XP_007210369.1| hypothetical protein PRUPE_ppa001337mg [Prunus persica]
           gi|462406104|gb|EMJ11568.1| hypothetical protein
           PRUPE_ppa001337mg [Prunus persica]
          Length = 850

 Score =  270 bits (691), Expect = 1e-70
 Identities = 126/148 (85%), Positives = 141/148 (95%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           ++GVFRQMQ AGC+PNA TYSILLNL+G+HGRYD+VR+LFLEMK+SNTEPD  TYNILI+
Sbjct: 321 SMGVFRQMQAAGCMPNAATYSILLNLYGRHGRYDDVRELFLEMKISNTEPDPATYNILIQ 380

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE +EPNMETYEGLIYACGKGGLHEDAK IL HM+EKG+VP
Sbjct: 381 VFGEGGYFKEVVTLFHDMVEENIEPNMETYEGLIYACGKGGLHEDAKNILLHMSEKGIVP 440

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+KAYTGVIEAYGQAALY+EALVAFNTM
Sbjct: 441 SSKAYTGVIEAYGQAALYDEALVAFNTM 468



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y+I+++L G+ G  D+  ++F +M          +Y  LI
Sbjct: 109 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCSEVFDDMPSQGVVRSVFSYTALI 168

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G ++  +     M ++ V P++ TY  ++ AC +GGL  E    +   M  +G+
Sbjct: 169 NAYGRNGQYETSLQFLDRMKKDKVSPSILTYNTVLNACARGGLEWEGLLGLFAEMRHEGI 228

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 229 QPDLVTYNTLLSACAGRGLGDEAEMVFRTM 258



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 41/147 (27%), Positives = 69/147 (46%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL+     G  DE   +F  M      PD  TY  L+E 
Sbjct: 217 LGLFAEMRHEGIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYRYLVET 276

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+    ++V  L  +M      P++ +Y  L+ A  + G   ++  +   M   G +P+
Sbjct: 277 FGKLDKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQLGSIRESMGVFRQMQAAGCMPN 336

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 337 AATYSILLNLYGRHGRYDDVRELFLEM 363



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 40/148 (27%), Positives = 64/148 (43%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A  +   M   G VP++  Y+ ++  +G+   YDE    F  M    ++P  ++YN LI 
Sbjct: 426 AKNILLHMSEKGIVPSSKAYTGVIEAYGQAALYDEALVAFNTMNEVGSKPSVESYNSLIY 485

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            F  GG ++E   +   M E     N+ T+ G+I A  +GG  E+A +    M ++    
Sbjct: 486 AFARGGLYRETEAVLSIMGEVGAARNVHTFNGMIEAFRQGGQFEEAIKAYVEMEKRRCDH 545

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
                  V+  Y  A L  E    F  M
Sbjct: 546 DEWTLEAVLSVYCVAGLVNECEEHFQEM 573



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/148 (24%), Positives = 65/148 (43%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL  F  M   G  P+  +Y+ L+  F + G Y E   +   M       +  T+N +IE
Sbjct: 461 ALVAFNTMNEVGSKPSVESYNSLIYAFARGGLYRETEAVLSIMGEVGAARNVHTFNGMIE 520

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            F +GG F+E +  + +M +   + +  T E ++      GL  + +     M   G++P
Sbjct: 521 AFRQGGQFEEAIKAYVEMEKRRCDHDEWTLEAVLSVYCVAGLVNECEEHFQEMKASGILP 580

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S   Y  ++  Y +   +++A    N M
Sbjct: 581 SVMCYCMMLAVYARNDRWDDANELLNEM 608


>ref|XP_007155373.1| hypothetical protein PHAVU_003G195800g [Phaseolus vulgaris]
           gi|561028727|gb|ESW27367.1| hypothetical protein
           PHAVU_003G195800g [Phaseolus vulgaris]
          Length = 857

 Score =  269 bits (687), Expect = 3e-70
 Identities = 126/148 (85%), Positives = 141/148 (95%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+GVFRQMQ AGCVPNA TYSILLNL+GKHGRYD+VR+LFLEMKVSNT+PD  TYNILI+
Sbjct: 331 AMGVFRQMQAAGCVPNADTYSILLNLYGKHGRYDDVRELFLEMKVSNTDPDVGTYNILIQ 390

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE +EPNMETYEGLI+ACGKGGL+EDAK+IL HM EKG+VP
Sbjct: 391 VFGEGGYFKEVVTLFHDMVEENIEPNMETYEGLIFACGKGGLYEDAKKILMHMKEKGIVP 450

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           ++KAYTGVIEA+GQAALYEEALVAFNTM
Sbjct: 451 TSKAYTGVIEAFGQAALYEEALVAFNTM 478



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN    +I++ L G+    D+ R++F EM  +        Y  +I
Sbjct: 119 SLRLFKYMQRQLWCKPNEHICTIMITLLGRESLLDKCREVFDEMPSNGVARTVYAYTAII 178

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G F+  + L   M +E V P++ TY  +I AC +GGL  E    +   M  +G+
Sbjct: 179 NAYGRNGQFQASLELLDAMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 238

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 239 QPDVITYNTLLCACAHRGLGDEAEMVFRTM 268



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 44/147 (29%), Positives = 72/147 (48%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL      G  DE   +F  M  S   PD +TY+ L++ 
Sbjct: 227 LGLFAEMRHEGIQPDVITYNTLLCACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQT 286

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+    ++V  L  +M      P++ +Y  L+ A  + G  +DA  +   M   G VP+
Sbjct: 287 FGKLNRLEKVSDLLREMESGGNLPDITSYNVLLEAHAELGSIKDAMGVFRQMQAAGCVPN 346

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 347 ADTYSILLNLYGKHGRYDDVRELFLEM 373



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 34/138 (24%), Positives = 63/138 (45%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M+  G VP +  Y+ ++  FG+   Y+E    F  MK   +    +TYN  +  + 
Sbjct: 439 ILMHMKEKGIVPTSKAYTGVIEAFGQAALYEEALVAFNTMKEVGSNATLETYNSFVHAYA 498

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
            GG +KE   +   M E  ++ ++ ++ G I A  + G +E+A +    M +    P+  
Sbjct: 499 RGGLYKEAEAILSRMNESGLKRDVNSFNGEIEAFRQAGQYEEAVKAHVEMEKANCEPNEL 558

Query: 370 AYTGVIEAYGQAALYEEA 423
               V+  Y  A L +E+
Sbjct: 559 TLEAVLSVYCTAGLVDES 576



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/134 (25%), Positives = 61/134 (45%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL  F  M+  G      TY+  ++ + + G Y E   +   M  S  + D +++N  IE
Sbjct: 471 ALVAFNTMKEVGSNATLETYNSFVHAYARGGLYKEAEAILSRMNESGLKRDVNSFNGEIE 530

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            F + G ++E V    +M +   EPN  T E ++      GL ++++     +   GL+P
Sbjct: 531 AFRQAGQYEEAVKAHVEMEKANCEPNELTLEAVLSVYCTAGLVDESEEQFQEIKASGLLP 590

Query: 361 SAKAYTGVIEAYGQ 402
           S   Y  ++  Y +
Sbjct: 591 SVMCYCMMLALYAK 604


>ref|XP_006600662.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like isoform X2 [Glycine max]
          Length = 860

 Score =  267 bits (683), Expect = 1e-69
 Identities = 126/148 (85%), Positives = 140/148 (94%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+ VFRQMQ AGCV NA TYS+LLNL+GKHGRYD+VRD+FLEMKVSNT+PDA TYNILI+
Sbjct: 331 AMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQ 390

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE VEPNMETYEGLI+ACGKGGL+EDAK+IL HMNEKG+VP
Sbjct: 391 VFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVP 450

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+KAYTGVIEA+GQAALYEEALV FNTM
Sbjct: 451 SSKAYTGVIEAFGQAALYEEALVVFNTM 478



 Score =  103 bits (257), Expect = 2e-20
 Identities = 52/145 (35%), Positives = 86/145 (59%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +F +M+V+   P+AGTY+IL+ +FG+ G + EV  LF +M   N EP+ +TY  LI   G
Sbjct: 369 IFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACG 428

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           +GG +++   +   M E+ + P+ + Y G+I A G+  L+E+A  + + MNE G  P+ +
Sbjct: 429 KGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVE 488

Query: 370 AYTGVIEAYGQAALYEEALVAFNTM 444
            Y   I A+ +  LY+EA    + M
Sbjct: 489 TYNSFIHAFARGGLYKEAEAILSRM 513



 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 49/145 (33%), Positives = 74/145 (51%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           VFR M  +G VP+  TYS L+  FGK  R ++V +L  EM+     PD  +YN+L+E + 
Sbjct: 264 VFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYA 323

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           E G  KE + +F  M       N  TY  L+   GK G ++D + I   M      P A 
Sbjct: 324 ELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAG 383

Query: 370 AYTGVIEAYGQAALYEEALVAFNTM 444
            Y  +I+ +G+   ++E +  F+ M
Sbjct: 384 TYNILIQVFGEGGYFKEVVTLFHDM 408



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y+I++ L G+ G  D+ R++F EM  +        Y  +I
Sbjct: 119 SLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVI 178

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G F   + L + M +E V P++ TY  +I AC +GGL  E    +   M  +G+
Sbjct: 179 NAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 238

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 239 QPDVITYNTLLGACAHRGLGDEAEMVFRTM 268



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 42/147 (28%), Positives = 71/147 (48%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL      G  DE   +F  M  S   PD +TY+ L++ 
Sbjct: 227 LGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQT 286

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+    ++V  L  +M      P++ +Y  L+ A  + G  ++A  +   M   G V +
Sbjct: 287 FGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVAN 346

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 347 AATYSVLLNLYGKHGRYDDVRDIFLEM 373



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 37/138 (26%), Positives = 66/138 (47%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G VP++  Y+ ++  FG+   Y+E   +F  M    + P  +TYN  I  F 
Sbjct: 439 ILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFA 498

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
            GG +KE   +   M E  ++ ++ ++ G+I A  +GG +E+A +    M +    P+  
Sbjct: 499 RGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNEL 558

Query: 370 AYTGVIEAYGQAALYEEA 423
               V+  Y  A L +E+
Sbjct: 559 TLEVVLSVYCSAGLVDES 576



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/134 (26%), Positives = 64/134 (47%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL VF  M   G  P   TY+  ++ F + G Y E   +   M  S  + D  ++N +I+
Sbjct: 471 ALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIK 530

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            F +GG ++E V  + +M +   EPN  T E ++      GL ++++     +   G++P
Sbjct: 531 AFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILP 590

Query: 361 SAKAYTGVIEAYGQ 402
           S   Y  ++  Y +
Sbjct: 591 SVMCYCLMLALYAK 604


>ref|XP_006579551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like isoform X2 [Glycine max]
          Length = 858

 Score =  267 bits (683), Expect = 1e-69
 Identities = 127/148 (85%), Positives = 140/148 (94%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+GVFRQMQ AGCV NA TYS+LLNL+GKHGRYD+VRDLFLEMKVSNT+PDA TYNILI+
Sbjct: 329 AMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQ 388

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM EE VEPNM+TYEGLI+ACGKGGL+EDAK+IL HMNEKG+VP
Sbjct: 389 VFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVP 448

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+KAYTGVIEA+GQAALYEEALV FNTM
Sbjct: 449 SSKAYTGVIEAFGQAALYEEALVMFNTM 476



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   ++I++ L G+ G  D+ R++F EM  +       +Y  +I
Sbjct: 117 SLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAII 176

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G F   + L + M +E V P++ TY  +I AC +GGL  E    +   M  +G+
Sbjct: 177 NAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 236

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 237 QPDVITYNTLLGACAHRGLGDEAEMVFRTM 266



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/137 (27%), Positives = 66/137 (48%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G VP++  Y+ ++  FG+   Y+E   +F  M    + P  +TYN LI  F 
Sbjct: 437 ILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFA 496

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
            GG +KE   +   M E  ++ ++ ++ G+I A  +GG +E+A +    M +    P+  
Sbjct: 497 RGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNEL 556

Query: 370 AYTGVIEAYGQAALYEE 420
               V+  Y  A L +E
Sbjct: 557 TLEAVLSIYCSAGLVDE 573



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/134 (27%), Positives = 64/134 (47%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL +F  M   G  P   TY+ L++ F + G Y E   +   M  S  + D  ++N +IE
Sbjct: 469 ALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIE 528

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            F +GG ++E V  + +M +   EPN  T E ++      GL ++ +     +   G++P
Sbjct: 529 AFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILP 588

Query: 361 SAKAYTGVIEAYGQ 402
           S   Y  ++  Y +
Sbjct: 589 SVMCYCMMLALYAK 602



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 42/147 (28%), Positives = 71/147 (48%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL      G  DE   +F  M  S   PD +TY+ L++ 
Sbjct: 225 LGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQT 284

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+    ++V  L  +M      P++ +Y  L+ A  + G  ++A  +   M   G V +
Sbjct: 285 FGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVAN 344

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 345 AATYSVLLNLYGKHGRYDDVRDLFLEM 371



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
 Frame = +1

Query: 43  PNAGTYSILLNLFGKHGR-YDEVRDLFLEMKVSNTEPDADTYNILIEVFGEGGYFKEVVT 219
           P+  TY+ ++N   + G  ++ +  LF EM+    +PD  TYN L+      G   E   
Sbjct: 202 PSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEM 261

Query: 220 LFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAKAYTGVIEAYG 399
           +F  M E  + P++ TY  L+   GK    E    +L  M   G +P   +Y  ++EAY 
Sbjct: 262 VFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYA 321

Query: 400 QAALYEEALVAFNTM 444
           +    +EA+  F  M
Sbjct: 322 ELGSIKEAMGVFRQM 336


>ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like isoform X1 [Glycine max]
          Length = 859

 Score =  267 bits (683), Expect = 1e-69
 Identities = 126/148 (85%), Positives = 140/148 (94%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+ VFRQMQ AGCV NA TYS+LLNL+GKHGRYD+VRD+FLEMKVSNT+PDA TYNILI+
Sbjct: 331 AMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQ 390

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE VEPNMETYEGLI+ACGKGGL+EDAK+IL HMNEKG+VP
Sbjct: 391 VFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVP 450

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+KAYTGVIEA+GQAALYEEALV FNTM
Sbjct: 451 SSKAYTGVIEAFGQAALYEEALVVFNTM 478



 Score =  103 bits (257), Expect = 2e-20
 Identities = 52/145 (35%), Positives = 86/145 (59%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +F +M+V+   P+AGTY+IL+ +FG+ G + EV  LF +M   N EP+ +TY  LI   G
Sbjct: 369 IFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACG 428

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           +GG +++   +   M E+ + P+ + Y G+I A G+  L+E+A  + + MNE G  P+ +
Sbjct: 429 KGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVE 488

Query: 370 AYTGVIEAYGQAALYEEALVAFNTM 444
            Y   I A+ +  LY+EA    + M
Sbjct: 489 TYNSFIHAFARGGLYKEAEAILSRM 513



 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 49/145 (33%), Positives = 74/145 (51%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           VFR M  +G VP+  TYS L+  FGK  R ++V +L  EM+     PD  +YN+L+E + 
Sbjct: 264 VFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYA 323

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           E G  KE + +F  M       N  TY  L+   GK G ++D + I   M      P A 
Sbjct: 324 ELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAG 383

Query: 370 AYTGVIEAYGQAALYEEALVAFNTM 444
            Y  +I+ +G+   ++E +  F+ M
Sbjct: 384 TYNILIQVFGEGGYFKEVVTLFHDM 408



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y+I++ L G+ G  D+ R++F EM  +        Y  +I
Sbjct: 119 SLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVI 178

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G F   + L + M +E V P++ TY  +I AC +GGL  E    +   M  +G+
Sbjct: 179 NAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 238

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 239 QPDVITYNTLLGACAHRGLGDEAEMVFRTM 268



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 42/147 (28%), Positives = 71/147 (48%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL      G  DE   +F  M  S   PD +TY+ L++ 
Sbjct: 227 LGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQT 286

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+    ++V  L  +M      P++ +Y  L+ A  + G  ++A  +   M   G V +
Sbjct: 287 FGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVAN 346

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 347 AATYSVLLNLYGKHGRYDDVRDIFLEM 373



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 37/138 (26%), Positives = 66/138 (47%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G VP++  Y+ ++  FG+   Y+E   +F  M    + P  +TYN  I  F 
Sbjct: 439 ILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFA 498

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
            GG +KE   +   M E  ++ ++ ++ G+I A  +GG +E+A +    M +    P+  
Sbjct: 499 RGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNEL 558

Query: 370 AYTGVIEAYGQAALYEEA 423
               V+  Y  A L +E+
Sbjct: 559 TLEVVLSVYCSAGLVDES 576



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/134 (26%), Positives = 64/134 (47%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL VF  M   G  P   TY+  ++ F + G Y E   +   M  S  + D  ++N +I+
Sbjct: 471 ALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIK 530

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            F +GG ++E V  + +M +   EPN  T E ++      GL ++++     +   G++P
Sbjct: 531 AFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILP 590

Query: 361 SAKAYTGVIEAYGQ 402
           S   Y  ++  Y +
Sbjct: 591 SVMCYCLMLALYAK 604


>ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like isoform X1 [Glycine max]
          Length = 857

 Score =  267 bits (683), Expect = 1e-69
 Identities = 127/148 (85%), Positives = 140/148 (94%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+GVFRQMQ AGCV NA TYS+LLNL+GKHGRYD+VRDLFLEMKVSNT+PDA TYNILI+
Sbjct: 329 AMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQ 388

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM EE VEPNM+TYEGLI+ACGKGGL+EDAK+IL HMNEKG+VP
Sbjct: 389 VFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVP 448

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+KAYTGVIEA+GQAALYEEALV FNTM
Sbjct: 449 SSKAYTGVIEAFGQAALYEEALVMFNTM 476



 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   ++I++ L G+ G  D+ R++F EM  +       +Y  +I
Sbjct: 117 SLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAII 176

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G F   + L + M +E V P++ TY  +I AC +GGL  E    +   M  +G+
Sbjct: 177 NAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 236

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 237 QPDVITYNTLLGACAHRGLGDEAEMVFRTM 266



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 38/137 (27%), Positives = 66/137 (48%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G VP++  Y+ ++  FG+   Y+E   +F  M    + P  +TYN LI  F 
Sbjct: 437 ILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFA 496

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
            GG +KE   +   M E  ++ ++ ++ G+I A  +GG +E+A +    M +    P+  
Sbjct: 497 RGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNEL 556

Query: 370 AYTGVIEAYGQAALYEE 420
               V+  Y  A L +E
Sbjct: 557 TLEAVLSIYCSAGLVDE 573



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/134 (27%), Positives = 64/134 (47%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL +F  M   G  P   TY+ L++ F + G Y E   +   M  S  + D  ++N +IE
Sbjct: 469 ALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIE 528

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            F +GG ++E V  + +M +   EPN  T E ++      GL ++ +     +   G++P
Sbjct: 529 AFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILP 588

Query: 361 SAKAYTGVIEAYGQ 402
           S   Y  ++  Y +
Sbjct: 589 SVMCYCMMLALYAK 602



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 42/147 (28%), Positives = 71/147 (48%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL      G  DE   +F  M  S   PD +TY+ L++ 
Sbjct: 225 LGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQT 284

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+    ++V  L  +M      P++ +Y  L+ A  + G  ++A  +   M   G V +
Sbjct: 285 FGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVAN 344

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 345 AATYSVLLNLYGKHGRYDDVRDLFLEM 371



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
 Frame = +1

Query: 43  PNAGTYSILLNLFGKHGR-YDEVRDLFLEMKVSNTEPDADTYNILIEVFGEGGYFKEVVT 219
           P+  TY+ ++N   + G  ++ +  LF EM+    +PD  TYN L+      G   E   
Sbjct: 202 PSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEM 261

Query: 220 LFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAKAYTGVIEAYG 399
           +F  M E  + P++ TY  L+   GK    E    +L  M   G +P   +Y  ++EAY 
Sbjct: 262 VFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAYA 321

Query: 400 QAALYEEALVAFNTM 444
           +    +EA+  F  M
Sbjct: 322 ELGSIKEAMGVFRQM 336


>gb|EXB29767.1| hypothetical protein L484_008930 [Morus notabilis]
          Length = 905

 Score =  266 bits (681), Expect = 2e-69
 Identities = 128/148 (86%), Positives = 139/148 (93%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+GVFRQMQ AGC+PNA TYSILLNL+GK GRY++VR+LFLEMKVSNTEPDA TYNILI+
Sbjct: 353 AVGVFRQMQTAGCLPNANTYSILLNLYGKQGRYEDVRELFLEMKVSNTEPDAATYNILIQ 412

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE VEPNMETYEGLI ACGKGGLH DAK IL+HMNEKG+VP
Sbjct: 413 VFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIIACGKGGLHGDAKIILNHMNEKGIVP 472

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+K YTGVIEAYGQAALYEEALVAFNTM
Sbjct: 473 SSKVYTGVIEAYGQAALYEEALVAFNTM 500



 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 50/145 (34%), Positives = 74/145 (51%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           VFR M   G VP+  TYS L+  FGK G+ ++V +L  EM+     PD  +YN+L+E + 
Sbjct: 286 VFRTMNEGGIVPDITTYSCLVETFGKLGKLEKVSELLKEMESRGNLPDITSYNVLLEAYA 345

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           E G   E V +F  M      PN  TY  L+   GK G +ED + +   M      P A 
Sbjct: 346 ESGSISEAVGVFRQMQTAGCLPNANTYSILLNLYGKQGRYEDVRELFLEMKVSNTEPDAA 405

Query: 370 AYTGVIEAYGQAALYEEALVAFNTM 444
            Y  +I+ +G+   ++E +  F+ M
Sbjct: 406 TYNILIQVFGEGGYFKEVVTLFHDM 430



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 46/150 (30%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y+I+++L G+ G  D+  ++F EM          +Y  LI
Sbjct: 141 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKSAEIFDEMPSQGVVRSVFSYTALI 200

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G ++  + L   M ++ V PN+ TY  +I AC +GGL  E    +   M  +G+
Sbjct: 201 NAYGRNGQYETSLQLLDRMKKDKVSPNILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 260

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 261 QPDLVTYNTLLGACANRGLGDEAEMVFRTM 290



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 44/147 (29%), Positives = 70/147 (47%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL      G  DE   +F  M      PD  TY+ L+E 
Sbjct: 249 LGLFAEMRHEGIQPDLVTYNTLLGACANRGLGDEAEMVFRTMNEGGIVPDITTYSCLVET 308

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+ G  ++V  L  +M      P++ +Y  L+ A  + G   +A  +   M   G +P+
Sbjct: 309 FGKLGKLEKVSELLKEMESRGNLPDITSYNVLLEAYAESGSISEAVGVFRQMQTAGCLPN 368

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   YE+    F  M
Sbjct: 369 ANTYSILLNLYGKQGRYEDVRELFLEM 395



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 38/142 (26%), Positives = 64/142 (45%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL  F  M   G  P+  TY+ L++ F + G Y E   +   M  S    + D +N LIE
Sbjct: 493 ALVAFNTMNEVGSRPSVETYNSLIHAFSRGGLYKEAEAILQRMGNSAVARNVDLFNSLIE 552

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            F +GG  +E V  + +M +   +P+  T E L+      GL ++ +     +   G++P
Sbjct: 553 AFRQGGQIEEAVKAYIEMGKSRCDPDERTLEALLSVYCFAGLVDECEEHFKEIKASGILP 612

Query: 361 SAKAYTGVIEAYGQAALYEEAL 426
           S   Y  ++  Y +    +  L
Sbjct: 613 SVMCYCTMLAVYARCDRIDRTL 634



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/137 (27%), Positives = 61/137 (44%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G VP++  Y+ ++  +G+   Y+E    F  M    + P  +TYN LI  F 
Sbjct: 461 ILNHMNEKGIVPSSKVYTGVIEAYGQAALYEEALVAFNTMNEVGSRPSVETYNSLIHAFS 520

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
            GG +KE   +   M    V  N++ +  LI A  +GG  E+A +    M +    P  +
Sbjct: 521 RGGLYKEAEAILQRMGNSAVARNVDLFNSLIEAFRQGGQIEEAVKAYIEMGKSRCDPDER 580

Query: 370 AYTGVIEAYGQAALYEE 420
               ++  Y  A L +E
Sbjct: 581 TLEALLSVYCFAGLVDE 597


>ref|XP_006344988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Solanum tuberosum]
          Length = 860

 Score =  265 bits (677), Expect = 5e-69
 Identities = 128/148 (86%), Positives = 138/148 (93%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+ VFRQMQ AGCV NA TYSILLNL+GK+GRYD+VR+LFLEMK SNTEPDADTYNILI+
Sbjct: 331 AMDVFRQMQAAGCVANAETYSILLNLYGKNGRYDQVRELFLEMKTSNTEPDADTYNILIQ 390

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE VEPNMETYEGLIYACGKGGLHEDAKRIL HMN +GLVP
Sbjct: 391 VFGEGGYFKEVVTLFHDMVEEKVEPNMETYEGLIYACGKGGLHEDAKRILLHMNGQGLVP 450

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+K YT VIEAYGQAALYEEA+VAFNTM
Sbjct: 451 SSKVYTAVIEAYGQAALYEEAVVAFNTM 478



 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 45/145 (31%), Positives = 75/145 (51%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +F  M      PN  TY  L+   GK G +++ + + L M      P +  Y  +IE +G
Sbjct: 404 LFHDMVEEKVEPNMETYEGLIYACGKGGLHEDAKRILLHMNGQGLVPSSKVYTAVIEAYG 463

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           +   ++E V  F+ M E    P +ET+  LI+   KGGL+++++ I   M E G+  +  
Sbjct: 464 QAALYEEAVVAFNTMNEVGSRPMVETFNSLIHTFAKGGLYKESEAIWFRMGEVGVPRNRD 523

Query: 370 AYTGVIEAYGQAALYEEALVAFNTM 444
           ++ G+IE Y Q   +EEA+ A+  M
Sbjct: 524 SFNGLIEGYRQGGQFEEAIKAYVEM 548



 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A  +F +M          +Y+ ++N +G++G+Y+    L  +MK  N  P   TYN +I 
Sbjct: 155 AFEIFDEMSTHSVARTVFSYTAIINAYGRNGQYETSLQLLEKMKQENIVPSILTYNTVIN 214

Query: 181 VFGEGGY-FKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLV 357
               GGY ++ ++ LF +M  E ++P++ TY  L+ AC    L ++A+ +   MNE G++
Sbjct: 215 SCARGGYEWEGLLGLFAEMRHEGIQPDLVTYNTLLSACSSRELEDEAEMVFRTMNEAGVL 274

Query: 358 PSAKAYTGVIEAYGQAALYEE 420
           P    Y+ ++E +G+    E+
Sbjct: 275 PDVTTYSYLVETFGKLGKLEK 295



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y++++ + G+ G  D+  ++F EM   +      +Y  +I
Sbjct: 119 SLRLFKYMQRQIWCKPNEHIYTLMIGILGREGLLDKAFEIFDEMSTHSVARTVFSYTAII 178

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G ++  + L   M +E + P++ TY  +I +C +GG   E    +   M  +G+
Sbjct: 179 NAYGRNGQYETSLQLLEKMKQENIVPSILTYNTVINSCARGGYEWEGLLGLFAEMRHEGI 238

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 239 QPDLVTYNTLLSACSSRELEDEAEMVFRTM 268



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 42/147 (28%), Positives = 70/147 (47%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL+        DE   +F  M  +   PD  TY+ L+E 
Sbjct: 227 LGLFAEMRHEGIQPDLVTYNTLLSACSSRELEDEAEMVFRTMNEAGVLPDVTTYSYLVET 286

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+ G  ++V  L  +M      P + +Y  L+ A    G  ++A  +   M   G V +
Sbjct: 287 FGKLGKLEKVSELLMEMEAGGTSPEVTSYNVLLEAYAHLGSMKEAMDVFRQMQAAGCVAN 346

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A+ Y+ ++  YG+   Y++    F  M
Sbjct: 347 AETYSILLNLYGKNGRYDQVRELFLEM 373



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/138 (27%), Positives = 65/138 (47%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G VP++  Y+ ++  +G+   Y+E    F  M    + P  +T+N LI  F 
Sbjct: 439 ILLHMNGQGLVPSSKVYTAVIEAYGQAALYEEAVVAFNTMNEVGSRPMVETFNSLIHTFA 498

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           +GG +KE   ++  M E  V  N +++ GLI    +GG  E+A +    M +    P  +
Sbjct: 499 KGGLYKESEAIWFRMGEVGVPRNRDSFNGLIEGYRQGGQFEEAIKAYVEMEKARCDPDER 558

Query: 370 AYTGVIEAYGQAALYEEA 423
               V+  Y  A L +E+
Sbjct: 559 TLEAVLSVYCFAGLVDES 576



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/146 (23%), Positives = 67/146 (45%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+  F  M   G  P   T++ L++ F K G Y E   ++  M       + D++N LIE
Sbjct: 471 AVVAFNTMNEVGSRPMVETFNSLIHTFAKGGLYKESEAIWFRMGEVGVPRNRDSFNGLIE 530

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            + +GG F+E +  + +M +   +P+  T E ++      GL ++++     +   G+ P
Sbjct: 531 GYRQGGQFEEAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDESEEQFQEIKSLGIQP 590

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFN 438
           S      ++  Y ++  ++ A    N
Sbjct: 591 SIICCCMMLAIYAKSERWDMARELLN 616


>ref|XP_004236160.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Solanum lycopersicum]
          Length = 860

 Score =  265 bits (677), Expect = 5e-69
 Identities = 128/148 (86%), Positives = 138/148 (93%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+ VFRQMQ AGCV NA TYSILLNL+GK+GRYD+VR+LFLEMK SNTEPDADTYNILI+
Sbjct: 331 AMDVFRQMQAAGCVANAETYSILLNLYGKNGRYDQVRELFLEMKTSNTEPDADTYNILIQ 390

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE VEPNMETYEGLIYACGKGGLHEDAKRIL HMN +GLVP
Sbjct: 391 VFGEGGYFKEVVTLFHDMVEEKVEPNMETYEGLIYACGKGGLHEDAKRILLHMNGQGLVP 450

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+K YT VIEAYGQAALYEEA+VAFNTM
Sbjct: 451 SSKVYTAVIEAYGQAALYEEAVVAFNTM 478



 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 45/145 (31%), Positives = 75/145 (51%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +F  M      PN  TY  L+   GK G +++ + + L M      P +  Y  +IE +G
Sbjct: 404 LFHDMVEEKVEPNMETYEGLIYACGKGGLHEDAKRILLHMNGQGLVPSSKVYTAVIEAYG 463

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           +   ++E V  F+ M E    P +ET+  LI+   KGGL+++++ I   M E G+  +  
Sbjct: 464 QAALYEEAVVAFNTMNEVGSRPVVETFNSLIHTFAKGGLYKESEAIWFRMGEVGVPRNRD 523

Query: 370 AYTGVIEAYGQAALYEEALVAFNTM 444
           ++ G+IE Y Q   +EEA+ A+  M
Sbjct: 524 SFNGMIEGYRQGGQFEEAIKAYVEM 548



 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A  +F +M          +Y+ ++N +G++G+Y+    L  +MK  N  P   TYN +I 
Sbjct: 155 AFEIFDEMSTHNVARTVFSYTAIINSYGRNGQYETSLQLLEKMKQENIVPSILTYNTVIN 214

Query: 181 VFGEGGY-FKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLV 357
               GGY ++ ++ LF +M  E ++P++ TY  L+ AC    L ++A+ +   MNE G++
Sbjct: 215 SCARGGYEWEGLLGLFAEMRHEGIQPDLVTYNTLLSACSSRELEDEAEMVFRTMNEAGVL 274

Query: 358 PSAKAYTGVIEAYGQAALYEE 420
           P    Y+ ++E +G+    E+
Sbjct: 275 PDVTTYSYLVETFGKLGKLEK 295



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y++++ + G+ G  D+  ++F EM   N      +Y  +I
Sbjct: 119 SLRLFKYMQRQIWCKPNEHIYTLMIGILGREGLLDKAFEIFDEMSTHNVARTVFSYTAII 178

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G ++  + L   M +E + P++ TY  +I +C +GG   E    +   M  +G+
Sbjct: 179 NSYGRNGQYETSLQLLEKMKQENIVPSILTYNTVINSCARGGYEWEGLLGLFAEMRHEGI 238

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 239 QPDLVTYNTLLSACSSRELEDEAEMVFRTM 268



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 42/147 (28%), Positives = 70/147 (47%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL+        DE   +F  M  +   PD  TY+ L+E 
Sbjct: 227 LGLFAEMRHEGIQPDLVTYNTLLSACSSRELEDEAEMVFRTMNEAGVLPDVTTYSYLVET 286

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+ G  ++V  L  +M      P + +Y  L+ A    G  ++A  +   M   G V +
Sbjct: 287 FGKLGKLEKVSELLMEMEAGGTSPEVTSYNVLLEAYAHLGSMKEAMDVFRQMQAAGCVAN 346

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A+ Y+ ++  YG+   Y++    F  M
Sbjct: 347 AETYSILLNLYGKNGRYDQVRELFLEM 373



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 37/138 (26%), Positives = 65/138 (47%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G VP++  Y+ ++  +G+   Y+E    F  M    + P  +T+N LI  F 
Sbjct: 439 ILLHMNGQGLVPSSKVYTAVIEAYGQAALYEEAVVAFNTMNEVGSRPVVETFNSLIHTFA 498

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           +GG +KE   ++  M E  V  N +++ G+I    +GG  E+A +    M +    P  +
Sbjct: 499 KGGLYKESEAIWFRMGEVGVPRNRDSFNGMIEGYRQGGQFEEAIKAYVEMEKARCDPDER 558

Query: 370 AYTGVIEAYGQAALYEEA 423
               V+  Y  A L +E+
Sbjct: 559 TLEAVLSVYCFAGLVDES 576



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/146 (22%), Positives = 67/146 (45%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+  F  M   G  P   T++ L++ F K G Y E   ++  M       + D++N +IE
Sbjct: 471 AVVAFNTMNEVGSRPVVETFNSLIHTFAKGGLYKESEAIWFRMGEVGVPRNRDSFNGMIE 530

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            + +GG F+E +  + +M +   +P+  T E ++      GL ++++     +   G+ P
Sbjct: 531 GYRQGGQFEEAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDESEEQFQEIKSLGIQP 590

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFN 438
           S      ++  Y ++  ++ A    N
Sbjct: 591 SIICCCMMLAIYAKSERWDMARELLN 616


>ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 862

 Score =  263 bits (672), Expect = 2e-68
 Identities = 125/148 (84%), Positives = 138/148 (93%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+GVFRQMQ AGC+ NA TYSILLNL+G+ GRYD+VR+LFLEMKVSN EPDA TYNILI+
Sbjct: 333 AMGVFRQMQEAGCMANAATYSILLNLYGRLGRYDDVRELFLEMKVSNAEPDAATYNILIQ 392

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYF+EVVTLFHDM+EE +EPNMETYEGLIYACGKGGLHEDAK IL HMNEKG+VP
Sbjct: 393 VFGEGGYFREVVTLFHDMVEENIEPNMETYEGLIYACGKGGLHEDAKNILLHMNEKGIVP 452

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+KAYTG IEAYGQAALY+EALVAFNTM
Sbjct: 453 SSKAYTGAIEAYGQAALYDEALVAFNTM 480



 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 49/137 (35%), Positives = 81/137 (59%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +F +M+V+   P+A TY+IL+ +FG+ G + EV  LF +M   N EP+ +TY  LI   G
Sbjct: 371 LFLEMKVSNAEPDAATYNILIQVFGEGGYFREVVTLFHDMVEENIEPNMETYEGLIYACG 430

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           +GG  ++   +   M E+ + P+ + Y G I A G+  L+++A    + MNE G  PS +
Sbjct: 431 KGGLHEDAKNILLHMNEKGIVPSSKAYTGAIEAYGQAALYDEALVAFNTMNEVGSSPSVE 490

Query: 370 AYTGVIEAYGQAALYEE 420
           ++  +I AY +  LY+E
Sbjct: 491 SFNSLIHAYARGGLYKE 507



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C P+   Y+I+++L G+ G  D+  ++F EM          +Y  LI
Sbjct: 121 SLRLFKYMQRQIWCKPSEHIYTIMISLLGREGLLDKCAEIFDEMPTQGVIRSVFSYTALI 180

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G F+  + L   M ++ V PN+ TY  ++ AC +GGL  E    +   M  +G+
Sbjct: 181 NAYGRNGQFEMSLQLLDRMKKDKVSPNILTYNTVLNACARGGLDWEGLLGLFAEMRHEGV 240

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 241 QPDLVTYNTLLSACAGRGLGDEAEMVFRTM 270



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 42/147 (28%), Positives = 70/147 (47%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL+     G  DE   +F  M      PD  TY+ L+E 
Sbjct: 229 LGLFAEMRHEGVQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYSYLVET 288

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+    ++V  L   M      P++ +Y  L+ A  + G  ++A  +   M E G + +
Sbjct: 289 FGKLNNLEKVSELLKGMESGGNLPDITSYNVLLEAYAQLGSIKEAMGVFRQMQEAGCMAN 348

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 349 AATYSILLNLYGRLGRYDDVRELFLEM 375



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 37/140 (26%), Positives = 61/140 (43%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A  +   M   G VP++  Y+  +  +G+   YDE    F  M    + P  +++N LI 
Sbjct: 438 AKNILLHMNEKGIVPSSKAYTGAIEAYGQAALYDEALVAFNTMNEVGSSPSVESFNSLIH 497

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            +  GG +KE   +   M E  +  N  ++ G+I A  +GG  E+A +    M ++   P
Sbjct: 498 AYARGGLYKETEQVLSIMGEFGIAINASSFNGMIEAFRQGGQFEEAIKTYVEMEKRRCDP 557

Query: 361 SAKAYTGVIEAYGQAALYEE 420
                  V+  Y  A L  E
Sbjct: 558 DECTLEAVLSVYSVAGLVNE 577



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 34/148 (22%), Positives = 68/148 (45%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL  F  M   G  P+  +++ L++ + + G Y E   +   M       +A ++N +IE
Sbjct: 473 ALVAFNTMNEVGSSPSVESFNSLIHAYARGGLYKETEQVLSIMGEFGIAINASSFNGMIE 532

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            F +GG F+E +  + +M +   +P+  T E ++      GL  + +     +   G++P
Sbjct: 533 AFRQGGQFEEAIKTYVEMEKRRCDPDECTLEAVLSVYSVAGLVNECEEHFEEIKASGILP 592

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S   Y  ++  Y +   +++A    N M
Sbjct: 593 SVMCYCMMLAVYAKTDRWDDANKLLNEM 620


>ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550592|gb|EEF52079.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 754

 Score =  262 bits (669), Expect = 4e-68
 Identities = 126/148 (85%), Positives = 136/148 (91%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+GVFRQMQ A CVPNA TYS+LLNL+G HGRYD+VR+LFLEMKVSNTEPD  TYN+LIE
Sbjct: 337 AMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIE 396

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE VEPNM TYEGLIYACGKGGLHEDAK+IL HM+EKG+VP
Sbjct: 397 VFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVP 456

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S KAYTGVIEAYGQAA YEEALV FNTM
Sbjct: 457 STKAYTGVIEAYGQAASYEEALVMFNTM 484



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 38/148 (25%), Positives = 75/148 (50%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL +F  M   G  P   TY+ L+N+F + G Y E   +  +M  S    D D++N +IE
Sbjct: 477 ALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIE 536

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            + +GG F+E +  + ++ +   +P+  T+E ++      GL ++++     +   G++P
Sbjct: 537 GYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILP 596

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S   Y  +I  Y ++  +++A    + M
Sbjct: 597 SVMCYCMMIAVYARSNRWDDAYEVLDEM 624



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y+I+++L G+ G  ++  ++F EM          +Y  LI
Sbjct: 125 SLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALI 184

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G ++  + L   M +E V P++ TY  +I +C +GGL+ E    +   M  +G+
Sbjct: 185 NSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGI 244

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 245 QPDIITYNTLLNACANRGLGDEAEMVFRTM 274



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 36/138 (26%), Positives = 66/138 (47%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G VP+   Y+ ++  +G+   Y+E   +F  M    ++P  +TYN LI +F 
Sbjct: 445 ILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFA 504

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
            GG +KE   +   M E  V  + +++ G+I    +GG  E+A +    + +    P  +
Sbjct: 505 RGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDER 564

Query: 370 AYTGVIEAYGQAALYEEA 423
            +  V+  Y  A L +E+
Sbjct: 565 TFEAVLSVYCTAGLVDES 582



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 43/147 (29%), Positives = 65/147 (44%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           L +F +M+  G  P+  TY+ LLN     G  DE   +F  M      PD  TY  L+E 
Sbjct: 233 LSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVET 292

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+    ++V  L  +M      P++ +Y  L+ A    G    A  +   M E   VP+
Sbjct: 293 FGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPN 352

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG    Y++    F  M
Sbjct: 353 AVTYSMLLNLYGGHGRYDDVRELFLEM 379



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHG-RYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +  +M+     P+  TY+ ++N   + G  ++ +  LF EM+    +PD  TYN L+
Sbjct: 196 SLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLL 255

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLV 357
                 G   E   +F  M E  + P++ TY  L+   GK    E    +L  M   G +
Sbjct: 256 NACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNL 315

Query: 358 PSAKAYTGVIEAYGQAALYEEALVAFNTM 444
           P   +Y  ++EAY        A+  F  M
Sbjct: 316 PDISSYNVLLEAYASKGDIRHAMGVFRQM 344


>ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Populus trichocarpa]
           gi|550322283|gb|EEF06266.2| hypothetical protein
           POPTR_0015s08030g [Populus trichocarpa]
          Length = 866

 Score =  261 bits (666), Expect = 9e-68
 Identities = 125/148 (84%), Positives = 136/148 (91%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A GVFR MQ AGCVPNA TYSILL L+GKHGRYDEVR+LFLEMKVSNTEPDA TYN LI+
Sbjct: 338 ATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLID 397

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM EE VEPNMETYEGLI+ACGKGGLH+DAK+IL HM+EKG++P
Sbjct: 398 VFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIP 457

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+KAYTGVIEAYGQAA+YEEALV  NTM
Sbjct: 458 SSKAYTGVIEAYGQAAMYEEALVTLNTM 485



 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y+I+++L G+ G  ++  D+F EM          +Y  LI
Sbjct: 126 SLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALI 185

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G ++  + L   M +E V P++ TY  +I +C +GGL  E    +   M  +G+
Sbjct: 186 NSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGI 245

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 246 QPDIVTYNTLLCACSNRGLGDEAEMVFRTM 275



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 46/147 (31%), Positives = 69/147 (46%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL      G  DE   +F  M      PD  TY  L++ 
Sbjct: 234 LGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDT 293

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+     +V  L  +M      P + +Y  L+ A  + G  EDA  +   M E G VP+
Sbjct: 294 FGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPN 353

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A+ Y+ ++  YG+   Y+E    F  M
Sbjct: 354 AETYSILLGLYGKHGRYDEVRELFLEM 380



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/142 (26%), Positives = 67/142 (47%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           +   M   G +P++  Y+ ++  +G+   Y+E       M    ++P  +TYN LI +F 
Sbjct: 446 ILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFA 505

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
            GG +KE   +   M +  V    +++ G+I    +GG  E+A +    M +  LVP  +
Sbjct: 506 RGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDER 565

Query: 370 AYTGVIEAYGQAALYEEALVAF 435
               V+  Y  A L +E++  F
Sbjct: 566 TLEAVLSVYCIAGLVDESVEQF 587



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/148 (24%), Positives = 69/148 (46%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL     M   G  P   TY+ L+ +F + G Y E   + L+M       + D++N +IE
Sbjct: 478 ALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIE 537

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            F +GG F+E +  + +M +  + P+  T E ++      GL +++      +   G++P
Sbjct: 538 GFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILP 597

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           +   Y  ++  Y ++  + EA    + M
Sbjct: 598 NVMCYCMMLAVYAKSDRWNEAYELLDEM 625


>ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3 [Theobroma cacao]
           gi|508773301|gb|EOY20557.1| Plastid transcriptionally
           active 2 isoform 3 [Theobroma cacao]
          Length = 811

 Score =  260 bits (664), Expect = 2e-67
 Identities = 122/148 (82%), Positives = 140/148 (94%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+GVF+QMQVAGC PNA TYSILLNL+G++GRYD+VR+LFLEMK SNTEPDA TYNILI+
Sbjct: 331 AMGVFKQMQVAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQ 390

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE +EPN++TY+GLI+ACGKGGLHEDAK+IL HMNEK +VP
Sbjct: 391 VFGEGGYFKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGLHEDAKKILLHMNEKCIVP 450

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S++AYTGVIEAYGQAALYEE LVAFNTM
Sbjct: 451 SSRAYTGVIEAYGQAALYEEVLVAFNTM 478



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y+I+++L G+ G  ++ R++F EM           Y  LI
Sbjct: 119 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAYTALI 178

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G +   + L   M ++ V P++ TY  +I AC +GGL  E    +   M  +G+
Sbjct: 179 NAYGRNGAYNISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 238

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L  EA + F TM
Sbjct: 239 QPDIVTYNTLLSACANRGLGNEAEMVFRTM 268



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 43/147 (29%), Positives = 71/147 (48%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL+     G  +E   +F  M      PD  TY+ L+E 
Sbjct: 227 LGLFAEMRHEGIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVES 286

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+ G  ++V  L  +M      P++ +Y  L+ A  K G  ++A  +   M   G  P+
Sbjct: 287 FGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQMQVAGCAPN 346

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 347 ATTYSILLNLYGRNGRYDDVRELFLEM 373



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/128 (29%), Positives = 62/128 (48%)
 Frame = +1

Query: 40  VPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFGEGGYFKEVVT 219
           VP++  Y+ ++  +G+   Y+EV   F  M    + P  +TYN L++ F  GG +KE   
Sbjct: 449 VPSSRAYTGVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGLYKEANA 508

Query: 220 LFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAKAYTGVIEAYG 399
           +   M E  V  N +++  LI A  +GG  EDA +    M +    P  +    V+  Y 
Sbjct: 509 ILSRMNETGVAKNRDSFNALIEAFRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYC 568

Query: 400 QAALYEEA 423
            A L +E+
Sbjct: 569 FAGLVDES 576



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/147 (24%), Positives = 67/147 (45%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           L  F  M      P   TY+ LL  F + G Y E   +   M  +    + D++N LIE 
Sbjct: 472 LVAFNTMNEVESNPTIETYNSLLQTFARGGLYKEANAILSRMNETGVAKNRDSFNALIEA 531

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           F +GG F++ +  + +M +   +P+  T E ++      GL +++      +   G++PS
Sbjct: 532 FRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDESNEQFQEIKALGVLPS 591

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
              Y  ++  Y +   +++A   F+ M
Sbjct: 592 VMCYCMMLAVYAKCDRWDDAYQLFDEM 618


>ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2 [Theobroma cacao]
           gi|508773300|gb|EOY20556.1| Plastid transcriptionally
           active 2 isoform 2 [Theobroma cacao]
          Length = 770

 Score =  260 bits (664), Expect = 2e-67
 Identities = 122/148 (82%), Positives = 140/148 (94%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+GVF+QMQVAGC PNA TYSILLNL+G++GRYD+VR+LFLEMK SNTEPDA TYNILI+
Sbjct: 331 AMGVFKQMQVAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQ 390

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE +EPN++TY+GLI+ACGKGGLHEDAK+IL HMNEK +VP
Sbjct: 391 VFGEGGYFKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGLHEDAKKILLHMNEKCIVP 450

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S++AYTGVIEAYGQAALYEE LVAFNTM
Sbjct: 451 SSRAYTGVIEAYGQAALYEEVLVAFNTM 478



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y+I+++L G+ G  ++ R++F EM           Y  LI
Sbjct: 119 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAYTALI 178

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G +   + L   M ++ V P++ TY  +I AC +GGL  E    +   M  +G+
Sbjct: 179 NAYGRNGAYNISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 238

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L  EA + F TM
Sbjct: 239 QPDIVTYNTLLSACANRGLGNEAEMVFRTM 268



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 43/147 (29%), Positives = 71/147 (48%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL+     G  +E   +F  M      PD  TY+ L+E 
Sbjct: 227 LGLFAEMRHEGIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVES 286

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+ G  ++V  L  +M      P++ +Y  L+ A  K G  ++A  +   M   G  P+
Sbjct: 287 FGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQMQVAGCAPN 346

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 347 ATTYSILLNLYGRNGRYDDVRELFLEM 373



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/128 (29%), Positives = 62/128 (48%)
 Frame = +1

Query: 40  VPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFGEGGYFKEVVT 219
           VP++  Y+ ++  +G+   Y+EV   F  M    + P  +TYN L++ F  GG +KE   
Sbjct: 449 VPSSRAYTGVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGLYKEANA 508

Query: 220 LFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAKAYTGVIEAYG 399
           +   M E  V  N +++  LI A  +GG  EDA +    M +    P  +    V+  Y 
Sbjct: 509 ILSRMNETGVAKNRDSFNALIEAFRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYC 568

Query: 400 QAALYEEA 423
            A L +E+
Sbjct: 569 FAGLVDES 576



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/147 (24%), Positives = 67/147 (45%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           L  F  M      P   TY+ LL  F + G Y E   +   M  +    + D++N LIE 
Sbjct: 472 LVAFNTMNEVESNPTIETYNSLLQTFARGGLYKEANAILSRMNETGVAKNRDSFNALIEA 531

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           F +GG F++ +  + +M +   +P+  T E ++      GL +++      +   G++PS
Sbjct: 532 FRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDESNEQFQEIKALGVLPS 591

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
              Y  ++  Y +   +++A   F+ M
Sbjct: 592 VMCYCMMLAVYAKCDRWDDAYQLFDEM 618


>ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1 [Theobroma cacao]
           gi|508773299|gb|EOY20555.1| Plastid transcriptionally
           active 2 isoform 1 [Theobroma cacao]
          Length = 859

 Score =  260 bits (664), Expect = 2e-67
 Identities = 122/148 (82%), Positives = 140/148 (94%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+GVF+QMQVAGC PNA TYSILLNL+G++GRYD+VR+LFLEMK SNTEPDA TYNILI+
Sbjct: 331 AMGVFKQMQVAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQ 390

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHDM+EE +EPN++TY+GLI+ACGKGGLHEDAK+IL HMNEK +VP
Sbjct: 391 VFGEGGYFKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGLHEDAKKILLHMNEKCIVP 450

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S++AYTGVIEAYGQAALYEE LVAFNTM
Sbjct: 451 SSRAYTGVIEAYGQAALYEEVLVAFNTM 478



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y+I+++L G+ G  ++ R++F EM           Y  LI
Sbjct: 119 SLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAYTALI 178

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G +   + L   M ++ V P++ TY  +I AC +GGL  E    +   M  +G+
Sbjct: 179 NAYGRNGAYNISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 238

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L  EA + F TM
Sbjct: 239 QPDIVTYNTLLSACANRGLGNEAEMVFRTM 268



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 43/147 (29%), Positives = 71/147 (48%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL+     G  +E   +F  M      PD  TY+ L+E 
Sbjct: 227 LGLFAEMRHEGIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNEGGILPDLTTYSYLVES 286

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+ G  ++V  L  +M      P++ +Y  L+ A  K G  ++A  +   M   G  P+
Sbjct: 287 FGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQMQVAGCAPN 346

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 347 ATTYSILLNLYGRNGRYDDVRELFLEM 373



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 38/128 (29%), Positives = 62/128 (48%)
 Frame = +1

Query: 40  VPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFGEGGYFKEVVT 219
           VP++  Y+ ++  +G+   Y+EV   F  M    + P  +TYN L++ F  GG +KE   
Sbjct: 449 VPSSRAYTGVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGLYKEANA 508

Query: 220 LFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAKAYTGVIEAYG 399
           +   M E  V  N +++  LI A  +GG  EDA +    M +    P  +    V+  Y 
Sbjct: 509 ILSRMNETGVAKNRDSFNALIEAFRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYC 568

Query: 400 QAALYEEA 423
            A L +E+
Sbjct: 569 FAGLVDES 576



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/147 (24%), Positives = 67/147 (45%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           L  F  M      P   TY+ LL  F + G Y E   +   M  +    + D++N LIE 
Sbjct: 472 LVAFNTMNEVESNPTIETYNSLLQTFARGGLYKEANAILSRMNETGVAKNRDSFNALIEA 531

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           F +GG F++ +  + +M +   +P+  T E ++      GL +++      +   G++PS
Sbjct: 532 FRQGGQFEDAIKAYVEMEKARCDPDERTLEAVLSVYCFAGLVDESNEQFQEIKALGVLPS 591

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
              Y  ++  Y +   +++A   F+ M
Sbjct: 592 VMCYCMMLAVYAKCDRWDDAYQLFDEM 618


>ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
           chloroplastic-like [Cucumis sativus]
          Length = 864

 Score =  257 bits (657), Expect = 1e-66
 Identities = 118/148 (79%), Positives = 138/148 (93%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           A+ VF+QMQ AGCVPNA TYSILLNL+GKHGRYD+VR+LFL+MK S+ EPDA TYNILI 
Sbjct: 343 AMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIR 402

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
           VFGEGGYFKEVVTLFHD+++E ++PNMETYEGL++ACGKGGLHEDAK+IL HMN KG+VP
Sbjct: 403 VFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVP 462

Query: 361 SAKAYTGVIEAYGQAALYEEALVAFNTM 444
           S+KAY+G+IEAYGQAALY+EALVAFNTM
Sbjct: 463 SSKAYSGLIEAYGQAALYDEALVAFNTM 490



 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 47/145 (32%), Positives = 72/145 (49%)
 Frame = +1

Query: 10  VFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFG 189
           VF+ M   G VP   TYS ++  FGK G+ ++V  L  EM+     PD  +YN+LIE   
Sbjct: 276 VFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHA 335

Query: 190 EGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAK 369
           + G  KE + +F  M      PN  TY  L+   GK G ++D + +   M E    P A 
Sbjct: 336 KLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDAT 395

Query: 370 AYTGVIEAYGQAALYEEALVAFNTM 444
            Y  +I  +G+   ++E +  F+ +
Sbjct: 396 TYNILIRVFGEGGYFKEVVTLFHDL 420



 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 45/147 (30%), Positives = 73/147 (49%)
 Frame = +1

Query: 4   LGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEV 183
           LG+F +M+  G  P+  TY+ LL+     G  DE   +F  M      P+  TY+ ++E 
Sbjct: 239 LGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVET 298

Query: 184 FGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPS 363
           FG+ G  ++V  L  +M  E   P++ +Y  LI A  K G  ++A  +   M   G VP+
Sbjct: 299 FGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPN 358

Query: 364 AKAYTGVIEAYGQAALYEEALVAFNTM 444
           A  Y+ ++  YG+   Y++    F  M
Sbjct: 359 ASTYSILLNLYGKHGRYDDVRELFLQM 385



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
 Frame = +1

Query: 1   ALGVFRQMQ-VAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILI 177
           +L +F+ MQ    C PN   Y+I+++L G+ G  ++  ++F EM          +Y  LI
Sbjct: 131 SLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALI 190

Query: 178 EVFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLH-EDAKRILHHMNEKGL 354
             +G  G ++  + L   M  E V PN+ TY  +I AC +G L  E    +   M  +G+
Sbjct: 191 NAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGV 250

Query: 355 VPSAKAYTGVIEAYGQAALYEEALVAFNTM 444
            P    Y  ++ A     L +EA + F TM
Sbjct: 251 QPDLVTYNTLLSACAARGLGDEAEMVFKTM 280



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 40/138 (28%), Positives = 63/138 (45%)
 Frame = +1

Query: 22  MQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIEVFGEGGY 201
           M   G VP++  YS L+  +G+   YDE    F  M    ++   DTYN LI  F  GG 
Sbjct: 455 MNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGL 514

Query: 202 FKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVPSAKAYTG 381
           +KE   +   M E  +  N +++ G+I    + G +E+A +    M +       +   G
Sbjct: 515 YKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEG 574

Query: 382 VIEAYGQAALYEEALVAF 435
           V+  Y  A L +E+   F
Sbjct: 575 VLGVYCFAGLVDESKEQF 592



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/141 (23%), Positives = 67/141 (47%)
 Frame = +1

Query: 1   ALGVFRQMQVAGCVPNAGTYSILLNLFGKHGRYDEVRDLFLEMKVSNTEPDADTYNILIE 180
           AL  F  M   G      TY+ L++ F + G Y E   +   M+      +A +++ +IE
Sbjct: 483 ALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIE 542

Query: 181 VFGEGGYFKEVVTLFHDMIEETVEPNMETYEGLIYACGKGGLHEDAKRILHHMNEKGLVP 360
            + + G ++E +  F +M +   E + +T EG++      GL +++K     +   G++P
Sbjct: 543 GYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILP 602

Query: 361 SAKAYTGVIEAYGQAALYEEA 423
           S   Y  ++  Y +   +++A
Sbjct: 603 SVLCYCMMLAVYAKNGRWDDA 623