BLASTX nr result

ID: Mentha25_contig00012373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00012373
         (382 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU44530.1| hypothetical protein MIMGU_mgv1a000959mg [Mimulus...   130   3e-28
ref|XP_006363793.1| PREDICTED: putative nuclear matrix constitue...    76   6e-12
ref|XP_004231953.1| PREDICTED: putative nuclear matrix constitue...    74   2e-11
dbj|BAI67718.1| nuclear matrix constituent protein 2 [Daucus car...    58   2e-06
dbj|BAI67716.1| nuclear matrix constituent protein 2 [Apium grav...    55   8e-06

>gb|EYU44530.1| hypothetical protein MIMGU_mgv1a000959mg [Mimulus guttatus]
          Length = 932

 Score =  130 bits (326), Expect = 3e-28
 Identities = 62/110 (56%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1    KRCADTVLEQRHSNKKRKKERDMIDHGSEDMMPSSPQKYSNTSKTDF-VEPSDRTQVGTE 177
            KRCADT+LEQR SNKKR++E+D+  HGSE+  PSS QKYSN SK +  V   ++T  G E
Sbjct: 821  KRCADTLLEQRQSNKKRRREKDVTTHGSENSTPSSTQKYSNASKIEHTVTQFNQTPDGGE 880

Query: 178  TTVYIDKVVTVEEITTFDIGSITRNSEETSIQHNGERVQTNGDVQQEING 327
            TTVYIDK++T++E+TT D+  IT ++EE   QH  E+++ NGDV+ EING
Sbjct: 881  TTVYIDKIITIQEVTTVDVERITGDNEEAEFQHKDEKLENNGDVELEING 930


>ref|XP_006363793.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Solanum tuberosum]
          Length = 937

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
 Frame = +1

Query: 1    KRCADTVLEQRHSNKKRKKERDMI----DHGSEDMMPSSPQKYSNTSKTDFVE--PSDRT 162
            KRCADT+L++  SNK+R+++   I    ++G+   + SSP    +    + +E  P+   
Sbjct: 813  KRCADTLLDRTPSNKRRREDGHFISQLTEYGASGTLSSSP----DAPDVEHLEVLPNHTP 868

Query: 163  QVGTETTVYIDKVVTVEEITTFDIGSITRNSEETSIQHNGERVQTNGDVQQEING 327
                ETTVYIDK+VTV E+T  D+  +T  S ET    +G +V  NG +Q + NG
Sbjct: 869  IAAEETTVYIDKIVTVHEVTEIDVRKVTEGSLETLSGESGRKVGNNGSLQSDKNG 923


>ref|XP_004231953.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Solanum lycopersicum]
          Length = 936

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
 Frame = +1

Query: 1    KRCADTVLEQRHSNKKRKKERDMIDHGSED--MMPSSPQKYSNTSKTDFVEPSDRTQVGT 174
            KRCADT+L++  SNK+R+++ D I   +E+    P  P   +   +   V P+       
Sbjct: 812  KRCADTLLDRTPSNKRRREDGDFISQLTENGASCPLPPTPDAPDVENLEVLPNQTHIAAE 871

Query: 175  ETTVYIDKVVTVEEITTFDIGSITRNSEETSIQHNGERVQTNGDVQQEING 327
            ETTVYIDK+VTV E+T  D+  +T  S  T    +G +V  NG ++ + NG
Sbjct: 872  ETTVYIDKIVTVHEVTEIDVRKVTEGSPGTLSGDSGRKVGNNGSLESDQNG 922


>dbj|BAI67718.1| nuclear matrix constituent protein 2 [Daucus carota]
          Length = 927

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
 Frame = +1

Query: 1    KRCADTVLEQRHSNKKRKKERDMIDHGSEDMMPSSPQKYSNTSKTDFVEPSDRTQV---G 171
            KRCA ++LEQ+ SNKK +       H  E + PS+     N    +    S   Q     
Sbjct: 803  KRCASSLLEQKVSNKKMR-------HSEEIITPSTIPARLNAPDDEHAVISANQQTPVHA 855

Query: 172  TETTVYIDKVVTVEEITTFD---IGSITRNSEETSIQHNGERVQTNGDVQQE 318
             ETTVYIDK++T+ E+T+F+   +    +N EE   Q   E+++ + +++ E
Sbjct: 856  KETTVYIDKIITIREVTSFNDAIVDGNNQNLEEALSQRAEEKLEDDNNIESE 907


>dbj|BAI67716.1| nuclear matrix constituent protein 2 [Apium graveolens]
          Length = 925

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/87 (31%), Positives = 49/87 (56%)
 Frame = +1

Query: 1    KRCADTVLEQRHSNKKRKKERDMIDHGSEDMMPSSPQKYSNTSKTDFVEPSDRTQVGTET 180
            KRCA ++LEQ+ SNKK +   ++++  +      +P+        +      +     ET
Sbjct: 802  KRCASSLLEQKASNKKMRHSEEIVNPSTISARLDAPEDEHAVKSVNQAPVHAK-----ET 856

Query: 181  TVYIDKVVTVEEITTFDIGSITRNSEE 261
            TVYIDK++T+ E+T+F+ G +  NS++
Sbjct: 857  TVYIDKIITIREVTSFNDGRVNGNSQD 883


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