BLASTX nr result
ID: Mentha25_contig00012328
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00012328
(573 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus... 154 1e-35
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub... 129 7e-28
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub... 125 1e-26
gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlise... 110 2e-22
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 102 5e-20
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 102 5e-20
dbj|BAG66034.1| RNA polymerase I largest subunit [Petunia integr... 102 9e-20
dbj|BAG66032.1| RNA polymerase I largest subunit [Petunia integr... 102 9e-20
dbj|BAG66026.1| RNA polymerase I largest subunit [Petunia axilla... 102 9e-20
dbj|BAG66028.1| RNA polymerase I largest subunit [Petunia axilla... 101 2e-19
dbj|BAG66036.1| RNA polymerase I largest subunit [Calibrachoa hy... 100 2e-19
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu... 93 6e-17
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro... 92 1e-16
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro... 92 1e-16
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ... 92 1e-16
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun... 89 6e-16
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 87 2e-15
ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform ... 87 3e-15
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub... 87 3e-15
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 85 2e-14
>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
Length = 1719
Score = 154 bits (390), Expect = 1e-35
Identities = 88/196 (44%), Positives = 128/196 (65%), Gaps = 7/196 (3%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRLSITRRQVARIYKLKMKLKETEFV 393
LTCPFS++RSK +VV+LV+ VKK+SVADL+E+MEV+LS+ + AR+YKLKM LK+TEFV
Sbjct: 1250 LTCPFSQWRSKREVVSLVSHVKKVSVADLIENMEVQLSVNHKTAARVYKLKMTLKDTEFV 1309
Query: 392 SSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNF-MXXXXXXSEDAEEDNSGAGTRX 216
S +++ +TL+ FL E+E IE+H+++LS++SGIKNF S +A+ED SG GT
Sbjct: 1310 SLENMHETLKTTFLGELEDAIENHVLYLSRLSGIKNFASNPKPKSSNEADEDESGLGTEN 1369
Query: 215 XXXXXXXXXXXXXXXXXXDT------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEE 54
+ Q+ TD+M+Y + SD ED+ +D +KG SD E
Sbjct: 1370 AGVNDDDDDDDDDKGDDLGSDVQKRKQQATDDMDYEDGSDGGAAEDD-DSDLEKGKSDVE 1428
Query: 53 DHEDMDTSKDEGAEHS 6
+ E+ +T KDE +EH+
Sbjct: 1429 NLEEDETGKDEESEHT 1444
>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
lycopersicum]
Length = 1677
Score = 129 bits (323), Expect = 7e-28
Identities = 80/199 (40%), Positives = 115/199 (57%), Gaps = 12/199 (6%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKLKET 402
+TCPF ++SK D +L+ KVKKI+VAD++ESMEV+L SI QV+++YKL +KLK+
Sbjct: 1212 MTCPFLGWKSKNDAQSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKH 1271
Query: 401 EFVSSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNFMXXXXXXSEDAEEDNSGAGT 222
+FVSS+D + TL+ VFL+E+E IESHL LSKI+GI+NF D E+N+ +
Sbjct: 1272 DFVSSEDCEYTLKFVFLRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTR 1331
Query: 221 RXXXXXXXXXXXXXXXXXXXDT------QKKTDEMNYGNESDVDHCEDELSA---DTKKG 69
R + Q+ TDEM+Y ++ D E E +A D K
Sbjct: 1332 REEEMLDDDDDDEDERTEDLSSDAQKRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKSE 1391
Query: 68 ASDEEDHEDMDTSKDEGAE 12
+DE D+ D + + D G E
Sbjct: 1392 QTDEIDNGDEEENGDRGNE 1410
>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
tuberosum]
Length = 1675
Score = 125 bits (313), Expect = 1e-26
Identities = 79/195 (40%), Positives = 112/195 (57%), Gaps = 8/195 (4%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKLKET 402
LTCPF ++SK D +L+ KVKKI+VAD++ESMEV+L SI QV+++YKL +KLK+
Sbjct: 1212 LTCPFLGWQSKNDAQSLLAKVKKITVADMIESMEVKLLPLSIYNHQVSQLYKLTVKLKKH 1271
Query: 401 EFVSSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNFMXXXXXXSEDAEEDNSGAGT 222
+FVSS+D + TL+ VFL+E+E IESHL LSKI+GI+NF D E+N+ +
Sbjct: 1272 DFVSSEDCEYTLKFVFLRELEDAIESHLALLSKINGIQNFKTSSESVDSDETEENASSTR 1331
Query: 221 RXXXXXXXXXXXXXXXXXXXDTQKK----TDEMNYGNESDVDHCEDELS-ADTKKGASDE 57
D QK+ TDEM+Y ++ + D E D K +DE
Sbjct: 1332 HEEEMLDDEDEDERTEDLSSDAQKRKQQTTDEMDYDDDENEDEAETTAEIEDEKSEQTDE 1391
Query: 56 EDHEDMDTSKDEGAE 12
D+ D + + G E
Sbjct: 1392 IDNGDEEEIGNRGNE 1406
>gb|EPS74252.1| hypothetical protein M569_00497, partial [Genlisea aurea]
Length = 1626
Score = 110 bits (276), Expect = 2e-22
Identities = 65/184 (35%), Positives = 106/184 (57%), Gaps = 7/184 (3%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRLSITRRQVARIYKLKMKLKETEFV 393
LTCPF + +SK + +++++ +KKI++ADL+ESM+V +S +V RIYKL+M+LK+TEFV
Sbjct: 1160 LTCPFLQRQSKPNALSVISNLKKITIADLIESMDVSISF-HPKVGRIYKLRMRLKDTEFV 1218
Query: 392 SSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNF-MXXXXXXSEDAEEDNSGAGTRX 216
S +D KTL+ FLKE+E +E+H++FL K++ I +F + EED + G +
Sbjct: 1219 SLEDTYKTLKTSFLKELEDALENHVVFLKKVAVINDFASHSRFEALSEGEEDKASDGAQE 1278
Query: 215 XXXXXXXXXXXXXXXXXXDT------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEE 54
D+ Q+ D+M+Y + SD + E+E D D++
Sbjct: 1279 AEEEGDDDGGDSDAGEDLDSDVQKRRQQARDDMDYEDASDSEQREEEEDLDKANAEEDDD 1338
Query: 53 DHED 42
D E+
Sbjct: 1339 DDEN 1342
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 102 bits (255), Expect = 5e-20
Identities = 74/220 (33%), Positives = 108/220 (49%), Gaps = 32/220 (14%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKLKET 402
+TCP RSK D L K+KK++VAD+ ESMEV + ++ Q IYKLKMKL E
Sbjct: 1203 MTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEP 1262
Query: 401 EF------VSSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNFM-----XXXXXXSE 255
+S +D ++TLE VF++E+E I++HL+ LSKISGIKNF+ E
Sbjct: 1263 ALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDE 1322
Query: 254 DAEEDN--SGAGTRXXXXXXXXXXXXXXXXXXXDTQKKTDEMNYGNE------------- 120
DA D G G Q+ +DEM+YG+
Sbjct: 1323 DASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGL 1382
Query: 119 -SDVDHCED--ELSADTKKGASDEEDHEDMDTSKDEGAEH 9
++D ED E+S + + G SD +D + SK + +++
Sbjct: 1383 TEEIDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKN 1422
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 102 bits (255), Expect = 5e-20
Identities = 74/220 (33%), Positives = 108/220 (49%), Gaps = 32/220 (14%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKLKET 402
+TCP RSK D L K+KK++VAD+ ESMEV + ++ Q IYKLKMKL E
Sbjct: 1274 MTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYKLKMKLYEP 1333
Query: 401 EF------VSSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNFM-----XXXXXXSE 255
+S +D ++TLE VF++E+E I++HL+ LSKISGIKNF+ E
Sbjct: 1334 ALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRSMASKETDE 1393
Query: 254 DAEEDN--SGAGTRXXXXXXXXXXXXXXXXXXXDTQKKTDEMNYGNE------------- 120
DA D G G Q+ +DEM+YG+
Sbjct: 1394 DASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGL 1453
Query: 119 -SDVDHCED--ELSADTKKGASDEEDHEDMDTSKDEGAEH 9
++D ED E+S + + G SD +D + SK + +++
Sbjct: 1454 TEEIDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKN 1493
>dbj|BAG66034.1| RNA polymerase I largest subunit [Petunia integrifolia]
gi|194578654|dbj|BAG66035.1| RNA polymerase I largest
subunit [Petunia integrifolia]
Length = 259
Score = 102 bits (253), Expect = 9e-20
Identities = 66/177 (37%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Frame = -2
Query: 536 DVVALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKLKETEFVSSKDIKKTL 366
D +L+ +VKKI+VAD++ESMEV L SI ++++YKL +KLK EFVS +D TL
Sbjct: 3 DAQSLLAEVKKITVADMIESMEVNLLPLSIYNHAISQVYKLTVKLKRHEFVSPEDCHYTL 62
Query: 365 EGVFLKEMEVQIESHLIFLSKISGIKNFMXXXXXXSEDAEEDNSGAGTRXXXXXXXXXXX 186
+ VFL+E+E IESHL LSKI+GIK+F + E+N+ TR
Sbjct: 63 KYVFLRELEDAIESHLALLSKINGIKDFKTSSESVASSETEENA-LSTRHEEEMLDDDDE 121
Query: 185 XXXXXXXXDT-------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMD 36
Q+ TDEM+YG+ S+ + E +A+ + G +D+ D D
Sbjct: 122 AEDERTEDLNSDAQKRKQQTTDEMDYGDGSEDEASESATTAEVEDGKTDQMDEMSRD 178
>dbj|BAG66032.1| RNA polymerase I largest subunit [Petunia integrifolia subsp.
inflata] gi|194578650|dbj|BAG66033.1| RNA polymerase I
largest subunit [Petunia integrifolia subsp. inflata]
Length = 259
Score = 102 bits (253), Expect = 9e-20
Identities = 66/177 (37%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Frame = -2
Query: 536 DVVALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKLKETEFVSSKDIKKTL 366
D +L+ +VKKI+VAD++ESMEV L SI ++++YKL +KLK EFVS +D TL
Sbjct: 3 DAQSLLAEVKKITVADMIESMEVNLLPLSIYNHAISQVYKLTVKLKRHEFVSPEDCHYTL 62
Query: 365 EGVFLKEMEVQIESHLIFLSKISGIKNFMXXXXXXSEDAEEDNSGAGTRXXXXXXXXXXX 186
+ VFL+E+E IESHL LSKI+GIK+F + E+N+ TR
Sbjct: 63 KYVFLRELEDAIESHLALLSKINGIKDFKTSSESVASSETEENA-LSTRHEEEMLDDDDE 121
Query: 185 XXXXXXXXDT-------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMD 36
Q+ TDEM+YG+ S+ + E +A+ + G +D+ D D
Sbjct: 122 AEDERTEDLNSDAQKRKQQTTDEMDYGDGSEDEASESATTAEVEDGKTDQMDEMSRD 178
>dbj|BAG66026.1| RNA polymerase I largest subunit [Petunia axillaris subsp.
axillaris] gi|194578638|dbj|BAG66027.1| RNA polymerase I
largest subunit [Petunia axillaris subsp. axillaris]
gi|194578644|dbj|BAG66030.1| RNA polymerase I largest
subunit [Petunia axillaris subsp. parodii]
gi|194578646|dbj|BAG66031.1| RNA polymerase I largest
subunit [Petunia axillaris subsp. parodii]
Length = 260
Score = 102 bits (253), Expect = 9e-20
Identities = 66/177 (37%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Frame = -2
Query: 536 DVVALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKLKETEFVSSKDIKKTL 366
D +L+ +VKKI+VAD++ESMEV L SI ++++YKL +KLK EFVS +D TL
Sbjct: 3 DAQSLLAEVKKITVADMIESMEVNLLPLSIYNHAISQVYKLTVKLKRHEFVSPEDCHYTL 62
Query: 365 EGVFLKEMEVQIESHLIFLSKISGIKNFMXXXXXXSEDAEEDNSGAGTRXXXXXXXXXXX 186
+ VFL+E+E IESHL LSKI+GIK+F + E+N+ TR
Sbjct: 63 KYVFLRELEDAIESHLALLSKINGIKDFKTSSESVASSETEENA-LSTRHEEEMLDDDDE 121
Query: 185 XXXXXXXXDT-------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMD 36
Q+ TDEM+YG+ S+ + E +A+ + G +D+ D D
Sbjct: 122 AEDERTEDLNSDAQKRKQQTTDEMDYGDGSEDEASESATAAEVEDGKTDQMDEMSRD 178
>dbj|BAG66028.1| RNA polymerase I largest subunit [Petunia axillaris subsp.
subandina] gi|194578642|dbj|BAG66029.1| RNA polymerase I
largest subunit [Petunia axillaris subsp. subandina]
Length = 260
Score = 101 bits (251), Expect = 2e-19
Identities = 65/177 (36%), Positives = 96/177 (54%), Gaps = 10/177 (5%)
Frame = -2
Query: 536 DVVALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKLKETEFVSSKDIKKTL 366
D +L+ +VKKI++AD++ESMEV L SI ++++YKL +KLK EFVS +D TL
Sbjct: 3 DAQSLLAEVKKITIADMIESMEVNLLPLSIYNHAISQVYKLTVKLKRHEFVSPEDCHYTL 62
Query: 365 EGVFLKEMEVQIESHLIFLSKISGIKNFMXXXXXXSEDAEEDNSGAGTRXXXXXXXXXXX 186
+ VFL+E+E IESHL LSKI+GIK+F + E+N+ TR
Sbjct: 63 KYVFLRELEDAIESHLALLSKINGIKDFKTSSESVASSETEENA-LSTRHEEEMLDDDDE 121
Query: 185 XXXXXXXXDT-------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHEDMD 36
Q+ TDEM+YG+ S+ + E +A+ + G +D+ D D
Sbjct: 122 AEDERTEDLNSDAQKRKQQTTDEMDYGDGSEDEASESATAAEVEDGKTDQIDEMSRD 178
>dbj|BAG66036.1| RNA polymerase I largest subunit [Calibrachoa hybrid cultivar]
Length = 254
Score = 100 bits (250), Expect = 2e-19
Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 10/171 (5%)
Frame = -2
Query: 527 ALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKLKETEFVSSKDIKKTLEGV 357
+L+ KVKKI+VAD++ESMEV L SI ++++YKL +KLK EFVS +D + TL+ V
Sbjct: 6 SLLVKVKKITVADMIESMEVNLLPLSIYNHAISQVYKLTVKLKRHEFVSPEDCEYTLKYV 65
Query: 356 FLKEMEVQIESHLIFLSKISGIKNFMXXXXXXSEDAEEDNSGAGTRXXXXXXXXXXXXXX 177
FL+E+E IESHL LSKI+GIK+F + E+N+ TR
Sbjct: 66 FLRELEDAIESHLALLSKINGIKDFKTSSESVASSETEENA-LSTRHEEEMLDDDDEAED 124
Query: 176 XXXXXDT-------QKKTDEMNYGNESDVDHCEDELSADTKKGASDEEDHE 45
+ Q+ TDEM+YG+ S+ + E +A+ + G + D E
Sbjct: 125 ERTEDLSSDAQKRKQQTTDEMDYGDGSEDEASESATTAEVEDGKTASRDEE 175
>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
gi|550335519|gb|ERP58815.1| hypothetical protein
POPTR_0006s05420g [Populus trichocarpa]
Length = 1132
Score = 92.8 bits (229), Expect = 6e-17
Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 18/201 (8%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKL--- 411
+TCP E R+K D L K+KK++VAD++ESMEV + ++ + RIYKLKMKL
Sbjct: 637 MTCPLHEGRTKEDAERLSDKLKKVTVADIVESMEVSVMPFAVQNDDICRIYKLKMKLYTP 696
Query: 410 ---KETEFVSSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNFMXXXXXXSE-DAEE 243
+ +S ++ ++TLE +F++E+E I+++L+ LSKISGIKNF+ + +AEE
Sbjct: 697 AHYPQHADISVENWEETLEVLFVRELEDAIQNYLVLLSKISGIKNFLKESHSGTPIEAEE 756
Query: 242 DNSGAGTR------XXXXXXXXXXXXXXXXXXXDTQKKTDEMNY--GNESDVDHCEDELS 87
D SG +R Q+ TDEM+Y G+E ++ E +LS
Sbjct: 757 DVSGNISREGENDDDSDDEEGEEADDLGLDVQKRKQQVTDEMDYDDGSEGVLNEDEGDLS 816
Query: 86 ADTKKGASDEEDHEDMDTSKD 24
S E D E D +
Sbjct: 817 GSQAPSGS-ESDTEPADKESE 836
>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
isoform 4 [Theobroma cacao]
Length = 1397
Score = 92.0 bits (227), Expect = 1e-16
Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRLS---ITRRQVARIYKLKMKLK-- 408
+TCP + ++K D + L K+KKI+VAD+LESMEV ++ + + IYKLKM L
Sbjct: 923 MTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKP 982
Query: 407 ----ETEFVSSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNFM-XXXXXXSEDAEE 243
E ++ KD + L+ VFL+E+E I++HL+ LSKISGIK FM S + +E
Sbjct: 983 DKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDE 1042
Query: 242 DNSGAGTRXXXXXXXXXXXXXXXXXXXDTQKKTDEMNYGNESDVDHCEDELSADT---KK 72
D S +R + K D+ + +++D + ++L D K+
Sbjct: 1043 DVSEGRSR---------------------ETKNDDDDDDDDADDEERAEDLGLDAQKQKQ 1081
Query: 71 GASDEEDHE-DMDTSKDEGA 15
+DE D+E D + ++EGA
Sbjct: 1082 QTTDEMDYEDDSEVEQNEGA 1101
>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
isoform 3 [Theobroma cacao]
Length = 1400
Score = 92.0 bits (227), Expect = 1e-16
Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRLS---ITRRQVARIYKLKMKLK-- 408
+TCP + ++K D + L K+KKI+VAD+LESMEV ++ + + IYKLKM L
Sbjct: 926 MTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKP 985
Query: 407 ----ETEFVSSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNFM-XXXXXXSEDAEE 243
E ++ KD + L+ VFL+E+E I++HL+ LSKISGIK FM S + +E
Sbjct: 986 DKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDE 1045
Query: 242 DNSGAGTRXXXXXXXXXXXXXXXXXXXDTQKKTDEMNYGNESDVDHCEDELSADT---KK 72
D S +R + K D+ + +++D + ++L D K+
Sbjct: 1046 DVSEGRSR---------------------ETKNDDDDDDDDADDEERAEDLGLDAQKQKQ 1084
Query: 71 GASDEEDHE-DMDTSKDEGA 15
+DE D+E D + ++EGA
Sbjct: 1085 QTTDEMDYEDDSEVEQNEGA 1104
>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
putative isoform 2 [Theobroma cacao]
Length = 1689
Score = 92.0 bits (227), Expect = 1e-16
Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRLS---ITRRQVARIYKLKMKLK-- 408
+TCP + ++K D + L K+KKI+VAD+LESMEV ++ + + IYKLKM L
Sbjct: 1215 MTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKP 1274
Query: 407 ----ETEFVSSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNFM-XXXXXXSEDAEE 243
E ++ KD + L+ VFL+E+E I++HL+ LSKISGIK FM S + +E
Sbjct: 1275 DKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDE 1334
Query: 242 DNSGAGTRXXXXXXXXXXXXXXXXXXXDTQKKTDEMNYGNESDVDHCEDELSADT---KK 72
D S +R + K D+ + +++D + ++L D K+
Sbjct: 1335 DVSEGRSR---------------------ETKNDDDDDDDDADDEERAEDLGLDAQKQKQ 1373
Query: 71 GASDEEDHE-DMDTSKDEGA 15
+DE D+E D + ++EGA
Sbjct: 1374 QTTDEMDYEDDSEVEQNEGA 1393
>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
gi|462398594|gb|EMJ04262.1| hypothetical protein
PRUPE_ppa000153mg [Prunus persica]
Length = 1612
Score = 89.4 bits (220), Expect = 6e-16
Identities = 70/212 (33%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRLS---ITRRQVARIYKLKMKLKET 402
+TCP + RSK + L K+KKI+VAD++ESM+V I Q RIYKL+M L
Sbjct: 1125 MTCPLQKGRSKEEAQELADKLKKITVADIIESMKVTFVPFFIQDGQTCRIYKLEMTLHVP 1184
Query: 401 EFV------SSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNF-------------- 282
E + SS+D ++ LE VF++E+E I++H++ LSKISGIKNF
Sbjct: 1185 EHLRTIIEYSSEDWEEILEIVFVRELEDAIQNHILLLSKISGIKNFTPDSQPKASNETDE 1244
Query: 281 -MXXXXXXSEDAEEDNSGAGTRXXXXXXXXXXXXXXXXXXXDTQKKTDEMNYGNESDVDH 105
+ E+ ++DN GA + TDEM+Y D
Sbjct: 1245 NLPEKRSQREEEDDDNGGA----DDGEHGEGVEDFGLDAHKRKLQATDEMDY-----EDG 1295
Query: 104 CEDEL-SADTKKGASDEEDHEDMDTSKDEGAE 12
C+DE+ AD G E D E+ + + E
Sbjct: 1296 CDDEVREADLSDGDESEIDEEENEVEIGKDGE 1327
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 87.4 bits (215), Expect = 2e-15
Identities = 64/190 (33%), Positives = 98/190 (51%), Gaps = 13/190 (6%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKLKET 402
+TCP E R+ D L K++K++VAD++ESMEV + +I V RIYKLKMKL
Sbjct: 1204 MTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKMKLYRP 1263
Query: 401 EF------VSSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNFMXXXXXXSE-DAEE 243
+S +D ++TLE VFL+E+E I++H+ LS+ISGIK+F+ + +A+E
Sbjct: 1264 AHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRASGEADE 1323
Query: 242 DNSGAGTRXXXXXXXXXXXXXXXXXXXDTQKKTDEMNYGNESDVDHCEDELSADTKK--- 72
D +G +E + N+ D D+L D +K
Sbjct: 1324 DVAG------------------------DMSHREERDDDNDDDDGERADDLGLDAQKRKL 1359
Query: 71 GASDEEDHED 42
A+DE D++D
Sbjct: 1360 QATDEMDYDD 1369
>ref|XP_007028853.1| Nuclear RNA polymerase A1, putative isoform 1 [Theobroma cacao]
gi|508717458|gb|EOY09355.1| Nuclear RNA polymerase A1,
putative isoform 1 [Theobroma cacao]
Length = 1665
Score = 87.0 bits (214), Expect = 3e-15
Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 9/193 (4%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRLS---ITRRQVARIYKLKMKLK-- 408
+TCP + ++K D + L K+KKI+VAD+LESMEV ++ + + IYKLKM L
Sbjct: 1218 MTCPLHKGKTKEDALCLANKMKKITVADILESMEVSVAPFAVDNGDICSIYKLKMMLGKP 1277
Query: 407 ----ETEFVSSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNFMXXXXXXSEDAEED 240
E ++ KD + L+ VFL+E+E I++HL+ LSKISGIK FM + + ++
Sbjct: 1278 DKYFENSDITVKDCEHILKVVFLRELEDAIQNHLVLLSKISGIKKFMPDSQRNASNEMDE 1337
Query: 239 NSGAGTRXXXXXXXXXXXXXXXXXXXDTQKKTDEMNYGNESDVDHCEDELSADTKKGASD 60
+ G ++ E ++ D D +DE A+ GAS
Sbjct: 1338 DVSEG-------------------------RSRETKNDDDDDDDDADDEERAE-DLGASL 1371
Query: 59 EEDHEDMDTSKDE 21
++D S+DE
Sbjct: 1372 AALESEIDMSEDE 1384
>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
sativus]
Length = 1650
Score = 87.0 bits (214), Expect = 3e-15
Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKLKET 402
+TCP E S L K+KKI+VAD++ESM V + S +R++ IYKL++
Sbjct: 1182 MTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFYPL 1241
Query: 401 E------FVSSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNFMXXXXXXSEDAEED 240
E +S +D++ TLE VFL+E+E IE ++ LSKI+GIKNF+ D++
Sbjct: 1242 ENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKNFV-------PDSQSK 1294
Query: 239 NSGAGTRXXXXXXXXXXXXXXXXXXXDTQKKTDEMNYGNESDVDHCEDELSADTKK---G 69
S G ++ D+ + GN+ DV ++L +D KK
Sbjct: 1295 GSSEGDE---------------VSSSRQKENDDDDDEGNDLDV---AEDLGSDMKKQKLQ 1336
Query: 68 ASDEEDHEDMDTSKDEGAEHS 6
A+DE D+ED D+ D A+ S
Sbjct: 1337 ANDEMDYED-DSEDDLNAKES 1356
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
RPA1-like [Cucumis sativus]
Length = 1652
Score = 84.7 bits (208), Expect = 2e-14
Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Frame = -2
Query: 572 LTCPFSEFRSKCDVVALVTKVKKISVADLLESMEVRL---SITRRQVARIYKLKMKLKET 402
+TCP E S L K+KKI+VAD++ESM V + S +R++ IYKL++
Sbjct: 1185 MTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRIDFYPL 1244
Query: 401 E------FVSSKDIKKTLEGVFLKEMEVQIESHLIFLSKISGIKNFMXXXXXXSEDAEED 240
E +S +D++ TLE VFL+E+E IE ++ LSKI+GIK F+ D++
Sbjct: 1245 ENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKXFV-------PDSQSK 1297
Query: 239 NSGAGTRXXXXXXXXXXXXXXXXXXXDTQKKTDEMNYGNESDVDHCEDELSADTKK---G 69
S G Q++ D+ + GN+ DV ++L +D +K
Sbjct: 1298 GSSEGDE----------------VSSSRQEEMDDDDEGNDLDV---AEDLGSDXEKQKLQ 1338
Query: 68 ASDEEDHEDMDTSKDEGAEHS 6
A+DE D+ED D+ D A+ S
Sbjct: 1339 ANDEMDYED-DSEDDLNAKES 1358