BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00012277
         (623 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus...   238   e-101
ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   225   8e-94
emb|CBI36559.3| unnamed protein product [Vitis vinifera]              225   8e-94
gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]       223   1e-93
sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymeras...   229   3e-93
ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   223   9e-93
sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymeras...   230   3e-92
emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum]            230   3e-92
ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isof...   220   8e-92
ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isof...   220   8e-92
ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   225   1e-91
ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prun...   219   1e-91
ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   223   4e-91
ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   223   1e-90
ref|XP_007138270.1| hypothetical protein PHAVU_009G194600g [Phas...   225   2e-90
ref|XP_002325119.1| DNA-directed RNA polymerase family protein [...   220   2e-90
ref|XP_007138271.1| hypothetical protein PHAVU_009G194600g [Phas...   225   2e-90
ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thal...   216   2e-90
ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thal...   216   2e-90
dbj|BAE98468.1| chloroplast single subunit DNA-dependent RNA pol...   216   2e-90

>gb|EYU37150.1| hypothetical protein MIMGU_mgv1a000925mg [Mimulus guttatus]
          Length = 941

 Score =  238 bits (606), Expect(2) = e-101
 Identities = 109/118 (92%), Positives = 114/118 (96%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIH+ANLYGGGV
Sbjct: 513 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHVANLYGGGV 572

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLSYD RV+FVENNI+EI DSADNSLNGNRWWLKAEDPFQCLAACINL EALKS SP
Sbjct: 573 EKLSYDDRVAFVENNISEIFDSADNSLNGNRWWLKAEDPFQCLAACINLVEALKSPSP 630



 Score =  156 bits (394), Expect(2) = e-101
 Identities = 79/85 (92%), Positives = 83/85 (97%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDSFEAAAVNLVAGD+PSDVYSEIAERVH IMKRDSEKDPETD +AL+AK+LI
Sbjct: 649 QHYAALGRDSFEAAAVNLVAGDKPSDVYSEIAERVHNIMKRDSEKDPETDRHALIAKVLI 708

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
           GQVDRKLVKQTVMTSVYGVTYVGAR
Sbjct: 709 GQVDRKLVKQTVMTSVYGVTYVGAR 733


>ref|XP_002274521.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Vitis
           vinifera]
          Length = 979

 Score =  225 bits (574), Expect(2) = 8e-94
 Identities = 101/118 (85%), Positives = 111/118 (94%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKI LANLY GGV
Sbjct: 551 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGV 610

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLSYD R++FV+N++ ++ DSADN LNGNRWWL AEDPFQCLAACINLSEAL+SSSP
Sbjct: 611 EKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSP 668



 Score =  145 bits (365), Expect(2) = 8e-94
 Identities = 72/85 (84%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGR+S EA+AVNLVAG++P+DVYSEIA RVH IMKRDS KDP TDP ALLAK+LI
Sbjct: 687 QHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLI 746

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
           GQVDRKLVKQTVMTSVYGVTY+GAR
Sbjct: 747 GQVDRKLVKQTVMTSVYGVTYIGAR 771


>emb|CBI36559.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  225 bits (574), Expect(2) = 8e-94
 Identities = 101/118 (85%), Positives = 111/118 (94%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKI LANLY GGV
Sbjct: 380 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIQLANLYAGGV 439

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLSYD R++FV+N++ ++ DSADN LNGNRWWL AEDPFQCLAACINLSEAL+SSSP
Sbjct: 440 EKLSYDGRLAFVDNHLDDVFDSADNPLNGNRWWLTAEDPFQCLAACINLSEALRSSSP 497



 Score =  145 bits (365), Expect(2) = 8e-94
 Identities = 72/85 (84%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGR+S EA+AVNLVAG++P+DVYSEIA RVH IMKRDS KDP TDP ALLAK+LI
Sbjct: 516 QHYAALGRNSLEASAVNLVAGEKPADVYSEIAARVHEIMKRDSNKDPATDPKALLAKVLI 575

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
           GQVDRKLVKQTVMTSVYGVTY+GAR
Sbjct: 576 GQVDRKLVKQTVMTSVYGVTYIGAR 600


>gb|EPS64933.1| hypothetical protein M569_09836 [Genlisea aurea]
          Length = 952

 Score =  223 bits (567), Expect(2) = 1e-93
 Identities = 100/118 (84%), Positives = 111/118 (94%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHN+DFRGRAYPMHPHLNHLSSDLCRGILEF++GRPLGKSGL WLK+HLANL+GGGV
Sbjct: 524 FYYPHNVDFRGRAYPMHPHLNHLSSDLCRGILEFSEGRPLGKSGLYWLKLHLANLFGGGV 583

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           +KL YD R+SFVENNI E+ DSADN L+GNRWWLKAEDPFQ LAACIN+SEAL+SSSP
Sbjct: 584 QKLPYDERLSFVENNITEVFDSADNPLSGNRWWLKAEDPFQFLAACINISEALRSSSP 641



 Score =  147 bits (371), Expect(2) = 1e-93
 Identities = 76/85 (89%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDSFEAAAVNLVAG +P+DVYSEIAERV  IMK DSEKDP  DPNA+LAKLLI
Sbjct: 660 QHYAALGRDSFEAAAVNLVAGHKPTDVYSEIAERVLDIMKSDSEKDPADDPNAVLAKLLI 719

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
           GQVDRKLVKQTVMTSVYGVTYVGAR
Sbjct: 720 GQVDRKLVKQTVMTSVYGVTYVGAR 744


>sp|P69242.1|RPOT3_NICSY RecName: Full=DNA-directed RNA polymerase 3, chloroplastic;
           AltName: Full=NsRpoT-C; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 3;
           Flags: Precursor gi|59800203|sp|P69243.1|RPO3A_TOBAC
           RecName: Full=DNA-directed RNA polymerase 3A,
           chloroplastic; AltName: Full=NictaRpoT3-syl; AltName:
           Full=T7 bacteriophage-type single subunit RNA polymerase
           3A; Flags: Precursor gi|21425641|emb|CAC82576.3|
           phage-type RNA polymerase [Nicotiana sylvestris]
           gi|21425679|emb|CAC95027.2| plastid RNA polymerase
           [Nicotiana tabacum] gi|24475541|dbj|BAC22693.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris] gi|24475543|dbj|BAC22694.1| T7
           bacteriophage-type single subunit RNA polymerase
           [Nicotiana sylvestris]
          Length = 977

 Score =  229 bits (585), Expect(2) = 3e-93
 Identities = 105/118 (88%), Positives = 113/118 (95%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GG+
Sbjct: 549 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGI 608

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKL YDAR++FVEN+I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSP
Sbjct: 609 EKLCYDARLAFVENHIDDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSP 666



 Score =  139 bits (349), Expect(2) = 3e-93
 Identities = 72/85 (84%), Positives = 77/85 (90%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDS EAAAVNLVAGD+P+DVY+EIA RV  I++ DS KDP TDPNALLAKLLI
Sbjct: 685 QHYAALGRDSMEAAAVNLVAGDKPADVYTEIALRVDHIIRGDSIKDPATDPNALLAKLLI 744

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            QVDRKLVKQTVMTSVYGVTYVGAR
Sbjct: 745 DQVDRKLVKQTVMTSVYGVTYVGAR 769


>ref|XP_004287148.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 973

 Score =  223 bits (567), Expect(2) = 9e-93
 Identities = 101/118 (85%), Positives = 108/118 (91%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIHLANLY GGV
Sbjct: 545 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYSGGV 604

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLSYD R+SFV+N+I +I DSA N +NGNRWWL AEDP QCLAACINLSEAL S SP
Sbjct: 605 EKLSYDGRISFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSP 662



 Score =  144 bits (363), Expect(2) = 9e-93
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRD+ EAAAVNLVAG++P+DVYSEIA RVH IMKRDS KDP T+PNALLAK+L+
Sbjct: 681 QHYAALGRDTLEAAAVNLVAGEKPADVYSEIAVRVHDIMKRDSNKDPTTNPNALLAKVLV 740

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            Q+DRKLVKQTVMTSVYGVTYVGAR
Sbjct: 741 NQIDRKLVKQTVMTSVYGVTYVGAR 765


>sp|Q8L6J1.2|RPO3B_TOBAC RecName: Full=DNA-directed RNA polymerase 3B, chloroplastic;
           AltName: Full=NictaRpoT3-tom; AltName: Full=T7
           bacteriophage-type single subunit RNA polymerase 3B;
           Flags: Precursor gi|21425667|emb|CAC95021.2| chloroplast
           RNA polymerase [Nicotiana tabacum]
          Length = 977

 Score =  230 bits (586), Expect(2) = 3e-92
 Identities = 106/118 (89%), Positives = 113/118 (95%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GGV
Sbjct: 549 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGV 608

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKL YDAR++FVEN+I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSP
Sbjct: 609 EKLCYDARLAFVENHIHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSP 666



 Score =  135 bits (339), Expect(2) = 3e-92
 Identities = 70/85 (82%), Positives = 76/85 (89%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV  I++ DS KDP  DPNALLAKLLI
Sbjct: 685 QHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLI 744

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            QVDRKLVKQTVMTSVYGVTYVGAR
Sbjct: 745 DQVDRKLVKQTVMTSVYGVTYVGAR 769


>emb|CAC95026.1| plastid RNA polymerase [Nicotiana tabacum]
          Length = 557

 Score =  230 bits (586), Expect(2) = 3e-92
 Identities = 106/118 (89%), Positives = 113/118 (95%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLKIHLA+LY GGV
Sbjct: 132 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKIHLASLYAGGV 191

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKL YDAR++FVEN+I +ILDSA+N LNGNRWWL AEDPFQCLAACINLSEALKSSSP
Sbjct: 192 EKLCYDARLAFVENHIHDILDSANNPLNGNRWWLNAEDPFQCLAACINLSEALKSSSP 249



 Score =  135 bits (339), Expect(2) = 3e-92
 Identities = 70/85 (82%), Positives = 76/85 (89%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV  I++ DS KDP  DPNALLAKLLI
Sbjct: 268 QHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSIKDPAIDPNALLAKLLI 327

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            QVDRKLVKQTVMTSVYGVTYVGAR
Sbjct: 328 DQVDRKLVKQTVMTSVYGVTYVGAR 352


>ref|XP_007013877.1| DNA/RNA polymerases superfamily protein isoform 1 [Theobroma cacao]
           gi|508784240|gb|EOY31496.1| DNA/RNA polymerases
           superfamily protein isoform 1 [Theobroma cacao]
          Length = 978

 Score =  220 bits (560), Expect(2) = 8e-92
 Identities = 97/118 (82%), Positives = 111/118 (94%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLG+SGL WLKIHLANL+ GGV
Sbjct: 550 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGV 609

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLS+D R++FV+N++ +I DSA+N +NGNRWWL AEDPFQCLAACINLSE+LKSSSP
Sbjct: 610 EKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSP 667



 Score =  144 bits (362), Expect(2) = 8e-92
 Identities = 73/85 (85%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDS EAAAVNLVAG++P+DVYSEIA RVH IMKRDS+KDP T+PNA LAKLLI
Sbjct: 686 QHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLI 745

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            QVDRKLVKQTVMTSVYGVT+VGAR
Sbjct: 746 DQVDRKLVKQTVMTSVYGVTFVGAR 770


>ref|XP_007013878.1| DNA/RNA polymerases superfamily protein isoform 2 [Theobroma cacao]
           gi|508784241|gb|EOY31497.1| DNA/RNA polymerases
           superfamily protein isoform 2 [Theobroma cacao]
          Length = 857

 Score =  220 bits (560), Expect(2) = 8e-92
 Identities = 97/118 (82%), Positives = 111/118 (94%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLG+SGL WLKIHLANL+ GGV
Sbjct: 428 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGRSGLHWLKIHLANLFAGGV 487

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLS+D R++FV+N++ +I DSA+N +NGNRWWL AEDPFQCLAACINLSE+LKSSSP
Sbjct: 488 EKLSHDGRLAFVDNHLDDIFDSAENPINGNRWWLTAEDPFQCLAACINLSESLKSSSP 545



 Score =  144 bits (362), Expect(2) = 8e-92
 Identities = 73/85 (85%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDS EAAAVNLVAG++P+DVYSEIA RVH IMKRDS+KDP T+PNA LAKLLI
Sbjct: 564 QHYAALGRDSLEAAAVNLVAGEKPADVYSEIAVRVHNIMKRDSDKDPATNPNASLAKLLI 623

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            QVDRKLVKQTVMTSVYGVT+VGAR
Sbjct: 624 DQVDRKLVKQTVMTSVYGVTFVGAR 648


>ref|XP_006343727.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Solanum tuberosum]
          Length = 1015

 Score =  225 bits (573), Expect(2) = 1e-91
 Identities = 102/118 (86%), Positives = 110/118 (93%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLK+HLA+LY GG+
Sbjct: 587 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGI 646

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKL YDAR++FVEN+I +ILDSA N LNGNRWWL AEDP QCLAACINLSEALKS SP
Sbjct: 647 EKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEALKSPSP 704



 Score =  138 bits (347), Expect(2) = 1e-91
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV  I++ DS KDP TDPNALLAKLLI
Sbjct: 723 QHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLI 782

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            QVDRKLVKQTVMTSVYGVTYVGAR
Sbjct: 783 DQVDRKLVKQTVMTSVYGVTYVGAR 807


>ref|XP_007203225.1| hypothetical protein PRUPE_ppa000868mg [Prunus persica]
           gi|462398756|gb|EMJ04424.1| hypothetical protein
           PRUPE_ppa000868mg [Prunus persica]
          Length = 976

 Score =  219 bits (558), Expect(2) = 1e-91
 Identities = 99/118 (83%), Positives = 108/118 (91%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRG+LEFA+GRPLGKSGLRWLKIHLANLY GGV
Sbjct: 548 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGV 607

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLSY+ R++FV+N+I +I DSA N +NGNRWWL AEDP QCLAACINLSEAL S SP
Sbjct: 608 EKLSYEGRLAFVDNHIDDIFDSATNPVNGNRWWLTAEDPLQCLAACINLSEALNSPSP 665



 Score =  144 bits (362), Expect(2) = 1e-91
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDS EAAAVNLV GD+P+DVYSEIA RVH IMKRDS KDP T PNALLA++L+
Sbjct: 684 QHYAALGRDSLEAAAVNLVDGDKPADVYSEIAARVHEIMKRDSNKDPTTSPNALLARILV 743

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            Q+DRKLVKQTVMTSVYGVTYVGAR
Sbjct: 744 NQIDRKLVKQTVMTSVYGVTYVGAR 768


>ref|XP_004242994.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Solanum lycopersicum]
          Length = 1007

 Score =  223 bits (569), Expect(2) = 4e-91
 Identities = 101/118 (85%), Positives = 110/118 (93%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFA+GRPLGKSGLRWLK+HLA+LY GG+
Sbjct: 579 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFAEGRPLGKSGLRWLKVHLASLYAGGI 638

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKL YDAR++FVEN+I +ILDSA N LNGNRWWL AEDP QCLAACINLSEA+KS SP
Sbjct: 639 EKLCYDARIAFVENHIDDILDSAHNPLNGNRWWLNAEDPLQCLAACINLSEAVKSLSP 696



 Score =  138 bits (347), Expect(2) = 4e-91
 Identities = 71/85 (83%), Positives = 77/85 (90%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDS EAAAVNLVAG++P+DVY+EIA RV  I++ DS KDP TDPNALLAKLLI
Sbjct: 715 QHYAALGRDSMEAAAVNLVAGEKPADVYTEIALRVDHIIRGDSTKDPATDPNALLAKLLI 774

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            QVDRKLVKQTVMTSVYGVTYVGAR
Sbjct: 775 DQVDRKLVKQTVMTSVYGVTYVGAR 799


>ref|XP_006474044.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Citrus sinensis]
          Length = 1009

 Score =  223 bits (569), Expect(2) = 1e-90
 Identities = 100/118 (84%), Positives = 112/118 (94%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSD+CRG+LEFA+GRPLGKSGLRWLKIHLANL+ GGV
Sbjct: 581 FYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGLRWLKIHLANLFSGGV 640

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLS+D R++FVEN++ EI DSA+N +NG+RWWL AEDPFQCLAACINLSEALKSSSP
Sbjct: 641 EKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSSP 698



 Score =  136 bits (343), Expect(2) = 1e-90
 Identities = 69/85 (81%), Positives = 76/85 (89%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGR++ EAAAVNLVAG++P+DVYSEIA RVH IMKRDS KDP   P ALLAK+LI
Sbjct: 717 QHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKILI 776

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            QVDRKLVKQTVMTSVYGVT+VGAR
Sbjct: 777 DQVDRKLVKQTVMTSVYGVTFVGAR 801


>ref|XP_007138270.1| hypothetical protein PHAVU_009G194600g [Phaseolus vulgaris]
           gi|561011357|gb|ESW10264.1| hypothetical protein
           PHAVU_009G194600g [Phaseolus vulgaris]
          Length = 972

 Score =  225 bits (573), Expect(2) = 2e-90
 Identities = 99/118 (83%), Positives = 110/118 (93%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHL SDLCRG+LEFA+G+PLGKSGLRWLKIH+ANLY GG+
Sbjct: 544 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGKPLGKSGLRWLKIHVANLYAGGI 603

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLSYD R+ F+EN+I +I+DSADN +NGNRWWL AEDPFQCL ACINLSEALKSSSP
Sbjct: 604 EKLSYDGRLGFIENHINDIIDSADNPINGNRWWLTAEDPFQCLTACINLSEALKSSSP 661



 Score =  134 bits (337), Expect(2) = 2e-90
 Identities = 66/85 (77%), Positives = 77/85 (90%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGR+  EAAAVNLVA ++P+DVY+EIA RVH IM+RDS KDP+T PNALLAK+LI
Sbjct: 680 QHYAALGRNELEAAAVNLVAKEKPADVYTEIAVRVHDIMRRDSNKDPDTFPNALLAKVLI 739

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            Q+DRKLVKQTVMTSVYGVT++GAR
Sbjct: 740 DQIDRKLVKQTVMTSVYGVTFIGAR 764


>ref|XP_002325119.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|222866553|gb|EEF03684.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 882

 Score =  220 bits (561), Expect(2) = 2e-90
 Identities = 99/118 (83%), Positives = 109/118 (92%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHL HLSSDLCRG+LEF +GRPLGKSGLRWLKIHLANLY GGV
Sbjct: 454 FYYPHNLDFRGRAYPMHPHLTHLSSDLCRGVLEFEEGRPLGKSGLRWLKIHLANLYSGGV 513

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLS+D R++FVEN+++EI DSA N +NG RWWLKAEDPFQCLAACINLSEAL S+SP
Sbjct: 514 EKLSHDGRLAFVENHLSEIFDSAKNPVNGKRWWLKAEDPFQCLAACINLSEALNSASP 571



 Score =  139 bits (349), Expect(2) = 2e-90
 Identities = 69/85 (81%), Positives = 78/85 (91%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRD+ EAAAVNLVA ++PSDVYSEIA RVH I++RDS KDP T+P+ALLAK+L+
Sbjct: 590 QHYAALGRDTLEAAAVNLVAAEKPSDVYSEIAVRVHEIIRRDSNKDPATNPHALLAKILV 649

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            QVDRKLVKQTVMTSVYGVTYVGAR
Sbjct: 650 DQVDRKLVKQTVMTSVYGVTYVGAR 674


>ref|XP_007138271.1| hypothetical protein PHAVU_009G194600g [Phaseolus vulgaris]
           gi|561011358|gb|ESW10265.1| hypothetical protein
           PHAVU_009G194600g [Phaseolus vulgaris]
          Length = 843

 Score =  225 bits (573), Expect(2) = 2e-90
 Identities = 99/118 (83%), Positives = 110/118 (93%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHL SDLCRG+LEFA+G+PLGKSGLRWLKIH+ANLY GG+
Sbjct: 544 FYYPHNLDFRGRAYPMHPHLNHLGSDLCRGLLEFAEGKPLGKSGLRWLKIHVANLYAGGI 603

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLSYD R+ F+EN+I +I+DSADN +NGNRWWL AEDPFQCL ACINLSEALKSSSP
Sbjct: 604 EKLSYDGRLGFIENHINDIIDSADNPINGNRWWLTAEDPFQCLTACINLSEALKSSSP 661



 Score =  134 bits (337), Expect(2) = 2e-90
 Identities = 66/85 (77%), Positives = 77/85 (90%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGR+  EAAAVNLVA ++P+DVY+EIA RVH IM+RDS KDP+T PNALLAK+LI
Sbjct: 680 QHYAALGRNELEAAAVNLVAKEKPADVYTEIAVRVHDIMRRDSNKDPDTFPNALLAKVLI 739

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            Q+DRKLVKQTVMTSVYGVT++GAR
Sbjct: 740 DQIDRKLVKQTVMTSVYGVTFIGAR 764


>ref|NP_179989.1| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
           gi|3914826|sp|O24600.1|RPOT3_ARATH RecName:
           Full=DNA-directed RNA polymerase 3, chloroplastic;
           Flags: Precursor gi|2330560|emb|CAA69972.1| chloroplast
           single-subunit DNA-dependent RNA polymerase [Arabidopsis
           thaliana] gi|2330564|emb|CAA69717.1| chloroplast
           single-subunit DNA-dependent RNA polymerase [Arabidopsis
           thaliana] gi|4115372|gb|AAD03373.1| chloroplast single
           subunit DNA-dependent RNA polymerase [Arabidopsis
           thaliana] gi|110739160|dbj|BAF01496.1| chloroplast
           single subunit DNA-dependent RNA polymerase [Arabidopsis
           thaliana] gi|330252437|gb|AEC07531.1| DNA-directed RNA
           polymerase 3 [Arabidopsis thaliana]
          Length = 993

 Score =  216 bits (549), Expect(2) = 2e-90
 Identities = 96/118 (81%), Positives = 110/118 (93%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFA+GRPLGKSGL WLKIHLANLY GGV
Sbjct: 565 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGV 624

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLS+DAR++FVEN++ +I+DSA+N ++G RWWLKAEDPFQCLAAC+ L++ALKS SP
Sbjct: 625 EKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSP 682



 Score =  143 bits (360), Expect(2) = 2e-90
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDSFEAAAVNLVAG++P+DVYSEI+ RVH IMK+DS KDPE++P A LAK+LI
Sbjct: 701 QHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAKILI 760

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            QVDRKLVKQTVMTSVYGVTYVGAR
Sbjct: 761 TQVDRKLVKQTVMTSVYGVTYVGAR 785


>ref|NP_973525.2| DNA-directed RNA polymerase 3 [Arabidopsis thaliana]
           gi|330252436|gb|AEC07530.1| DNA-directed RNA polymerase
           3 [Arabidopsis thaliana]
          Length = 895

 Score =  216 bits (549), Expect(2) = 2e-90
 Identities = 96/118 (81%), Positives = 110/118 (93%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFA+GRPLGKSGL WLKIHLANLY GGV
Sbjct: 565 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGV 624

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLS+DAR++FVEN++ +I+DSA+N ++G RWWLKAEDPFQCLAAC+ L++ALKS SP
Sbjct: 625 EKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSP 682



 Score =  143 bits (360), Expect(2) = 2e-90
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDSFEAAAVNLVAG++P+DVYSEI+ RVH IMK+DS KDPE++P A LAK+LI
Sbjct: 701 QHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAKILI 760

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            QVDRKLVKQTVMTSVYGVTYVGAR
Sbjct: 761 TQVDRKLVKQTVMTSVYGVTYVGAR 785


>dbj|BAE98468.1| chloroplast single subunit DNA-dependent RNA polymerase
           [Arabidopsis thaliana]
          Length = 786

 Score =  216 bits (549), Expect(2) = 2e-90
 Identities = 96/118 (81%), Positives = 110/118 (93%)
 Frame = -1

Query: 623 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGILEFADGRPLGKSGLRWLKIHLANLYGGGV 444
           FYYPHNLDFRGRAYPMHPHLNHLSSDLCRG LEFA+GRPLGKSGL WLKIHLANLY GGV
Sbjct: 565 FYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSGLHWLKIHLANLYAGGV 624

Query: 443 EKLSYDARVSFVENNIAEILDSADNSLNGNRWWLKAEDPFQCLAACINLSEALKSSSP 270
           EKLS+DAR++FVEN++ +I+DSA+N ++G RWWLKAEDPFQCLAAC+ L++ALKS SP
Sbjct: 625 EKLSHDARLAFVENHLDDIMDSAENPIHGKRWWLKAEDPFQCLAACVILTQALKSPSP 682



 Score =  143 bits (360), Expect(2) = 2e-90
 Identities = 71/85 (83%), Positives = 79/85 (92%)
 Frame = -2

Query: 256 QHYAALGRDSFEAAAVNLVAGDQPSDVYSEIAERVHIIMKRDSEKDPETDPNALLAKLLI 77
           QHYAALGRDSFEAAAVNLVAG++P+DVYSEI+ RVH IMK+DS KDPE++P A LAK+LI
Sbjct: 701 QHYAALGRDSFEAAAVNLVAGEKPADVYSEISRRVHEIMKKDSSKDPESNPTAALAKILI 760

Query: 76  GQVDRKLVKQTVMTSVYGVTYVGAR 2
            QVDRKLVKQTVMTSVYGVTYVGAR
Sbjct: 761 TQVDRKLVKQTVMTSVYGVTYVGAR 785