BLASTX nr result
ID: Mentha25_contig00012103
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha25_contig00012103 (1770 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Mimulus... 637 e-180 gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea] 587 e-165 ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein... 566 e-159 ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein... 563 e-158 ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein... 546 e-152 ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein... 544 e-152 ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta... 542 e-151 ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phas... 541 e-151 ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma ... 540 e-150 ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein... 532 e-148 gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote... 531 e-148 ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prun... 520 e-145 ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein... 516 e-143 ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein... 516 e-143 ref|XP_002305685.1| plus-3 domain-containing family protein [Pop... 511 e-142 ref|XP_002316628.2| plus-3 domain-containing family protein [Pop... 509 e-141 ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr... 504 e-140 ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein... 503 e-139 ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein... 499 e-138 ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp.... 493 e-136 >gb|EYU27933.1| hypothetical protein MIMGU_mgv1a003121mg [Mimulus guttatus] Length = 606 Score = 637 bits (1642), Expect = e-180 Identities = 356/576 (61%), Positives = 397/576 (68%), Gaps = 6/576 (1%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADLEKLLLEAAGRT Y++RKPS Sbjct: 1 MADLEKLLLEAAGRTTTSGRNRHSSPPSRRRRKGSYSDDGSDSKNEESDGDRGYTNRKPS 60 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDREKLSKLTE 418 SQVPLKKRLD A LYKDEDDREKLSKLTE Sbjct: 61 GSQVPLKKRLD-ATDRDEDRSSQEGDEDEYDHDRDSDNDSVGSDLYKDEDDREKLSKLTE 119 Query: 419 LEREMILEARATKRSDRDLTEKLKKRKGQDRKG-SPPKAPTRSMRSKAERAGALDELVKR 595 LEREMILEARATKRSDRDLTEKLKKRKGQDRKG SPPK TR+MRSKA+RAGALDELVKR Sbjct: 120 LEREMILEARATKRSDRDLTEKLKKRKGQDRKGSSPPKTHTRNMRSKAQRAGALDELVKR 179 Query: 596 RRESAKGGSGKRYSPVKRRSFAAA-----TLNSPXXXXXXXXXXXXXXXXXXXLADSDDD 760 RR++AKGGSG RYSPVKRRSFAAA L+SP L DSDDD Sbjct: 180 RRDAAKGGSGGRYSPVKRRSFAAAAATTTALSSPSRSDSGSHSDDGDSTGDGGLGDSDDD 239 Query: 761 KISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVRVGIGKSRSGPIYRLCVV 940 K+S SKVPTFEDI+EITIRRSKL+KWFMEP+FDELIVGCFVRVGIGKSRSG IYRLCVV Sbjct: 240 KVS--SKVPTFEDIKEITIRRSKLSKWFMEPFFDELIVGCFVRVGIGKSRSGSIYRLCVV 297 Query: 941 RNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISDSPPLKEEFDQWMREVER 1120 RNVDATDPDR+YK DNKTT K+LNVVWG++SSAARWQMAM+SDS P +EEFDQW++EVER Sbjct: 298 RNVDATDPDRKYKLDNKTTSKWLNVVWGSESSAARWQMAMVSDSAPQREEFDQWVKEVER 357 Query: 1121 SGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKSATWRPLNVAAEKDRLRRSLE 1300 +GGH+P+KQEV++K+DAIQ+ NT+VY AATVKQM++EKK RSLE Sbjct: 358 NGGHMPTKQEVMEKRDAIQRTNTFVYSAATVKQMLQEKK-----------------RSLE 400 Query: 1301 VAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEMNRRNRVENFKNASELRPVNA 1480 VAKEN+D+AEVERIK RL+ELE+SR+ LEK+SKA+KLAEMNR+NRVENFKNASE++PV Sbjct: 401 VAKENEDDAEVERIKARLQELESSRQALEKNSKAVKLAEMNRKNRVENFKNASEMKPVTI 460 Query: 1481 GLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGGAVFXXX 1660 GLKAGEAGYDPFSRRWTRSRNYYV E + NGGG Sbjct: 461 GLKAGEAGYDPFSRRWTRSRNYYV-----------GNSGGGVEAEVAVETNGGGGA-ALP 508 Query: 1661 XXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 KLVDT APVDQGTES +LHN Sbjct: 509 GLAATEAALVAAAGAGKLVDTMAPVDQGTESNLLHN 544 >gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea] Length = 643 Score = 587 bits (1514), Expect = e-165 Identities = 321/572 (56%), Positives = 380/572 (66%), Gaps = 2/572 (0%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADLEKLLLEAAGRT YS RKPS Sbjct: 1 MADLEKLLLEAAGRTTTSERNRPPSRRRRKHSNSDGGSDSRNDDSDGDHH---YSQRKPS 57 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDREKLSKLTE 418 +SQVPLKKR DP LYKDE+DREKLSKLTE Sbjct: 58 SSQVPLKKRFDPTDRDDRSSQDGDEINSNHERDSDNDTIGSD--LYKDEEDREKLSKLTE 115 Query: 419 LEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSM-RSKAERAGALDELVKR 595 LEREMILE RATK SDRDLTEKLKKRKG D+K SP KA TRS RSKAERAGALDELVKR Sbjct: 116 LEREMILEGRATKISDRDLTEKLKKRKGHDKKLSPAKAHTRSSTRSKAERAGALDELVKR 175 Query: 596 RRESAKGGSGK-RYSPVKRRSFAAATLNSPXXXXXXXXXXXXXXXXXXXLADSDDDKISA 772 RR++ KGG+ + RYSPVKRRSF AATL+SP + DSD+DK + Sbjct: 176 RRDAVKGGTTRSRYSPVKRRSFTAATLSSPSHSDSRSQSGEGESTGDGGIGDSDEDKTQS 235 Query: 773 ESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVRVGIGKSRSGPIYRLCVVRNVD 952 +S VPTF+DI+EIT++RSKL KWFMEP+FDELI+GCFV+VGIGKSRSG +YRLCVVRNVD Sbjct: 236 QSNVPTFDDIKEITVQRSKLLKWFMEPFFDELIIGCFVKVGIGKSRSGNVYRLCVVRNVD 295 Query: 953 ATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISDSPPLKEEFDQWMREVERSGGH 1132 ++DP R Y F+N+ THKYL++VWG++SSAARWQM MIS+ P +EEFD W +EVER+GG+ Sbjct: 296 SSDPSRAYDFENRKTHKYLSLVWGSESSAARWQMKMISNEAPKREEFDLWFKEVERTGGN 355 Query: 1133 LPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKSATWRPLNVAAEKDRLRRSLEVAKE 1312 +P++QEV +K++A+Q+ N +VY AATVKQMV+EKKSAT +P+NVA EKDRLRR++EVA+E Sbjct: 356 MPTRQEVSEKREALQRINRFVYSAATVKQMVQEKKSATHKPINVALEKDRLRRAMEVARE 415 Query: 1313 NKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEMNRRNRVENFKNASELRPVNAGLKA 1492 N D E++ I+ +L ELE+SR+V EKDSKA KLAEMN +NR NFKNASE++PVN LKA Sbjct: 416 NDDHDEMKEIQRKLSELESSRKVPEKDSKAAKLAEMNSKNRKANFKNASEMKPVNTSLKA 475 Query: 1493 GEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXETLIVKNGGGAVFXXXXXXX 1672 GE GYDPFSRRWTRSRNYYV T Sbjct: 476 GEVGYDPFSRRWTRSRNYYVSNAATGIGEANGSANVASVAATAAALEAAAGA-------- 527 Query: 1673 XXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 KLVDT APVDQGTES +LH+ Sbjct: 528 -----------GKLVDTNAPVDQGTESNLLHD 548 >ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1 [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 2 [Solanum lycopersicum] Length = 645 Score = 567 bits (1460), Expect = e-159 Identities = 315/539 (58%), Positives = 368/539 (68%), Gaps = 22/539 (4%) Frame = +2 Query: 218 YSSRKPSASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRE 397 YS RK S SQVPLKKRLDP LYKD+DDR+ Sbjct: 54 YSGRKLSGSQVPLKKRLDP-QERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQ 112 Query: 398 KLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSMRSK------- 556 KL+++TELEREMIL RA K+SDR L +K+ K + Q RK S P + +R MRS Sbjct: 113 KLAQMTELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRA 172 Query: 557 AERAGALDELVKRR-------------RESAKGGSGKR-YSPVKRRSFAAATL-NSPXXX 691 A+R AL+E+ +R R++A+ GSG R YSP+KRRSF AA+L +SP Sbjct: 173 ADRDDALNEIRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRG 232 Query: 692 XXXXXXXXXXXXXXXXLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 871 + DSDDDK S ES++PTFEDI+EI+IRRSKLAKWFMEP+FDELI Sbjct: 233 ESDSHSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELI 292 Query: 872 VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 1051 VGCFVRVGIG+SRSGPIYRLCVVRNVDA+DP+RQYK +NKTT K+LNVVWGN++SAARWQ Sbjct: 293 VGCFVRVGIGRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQ 352 Query: 1052 MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 1231 MAMISDSPPL++EFDQW+REVERSGG +PSKQ+VL+KK+AIQK NT+VY A TVKQM+++ Sbjct: 353 MAMISDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQ 412 Query: 1232 KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 1411 KKSATWRPLNVAAEKDRLRR +EVAK DEAEVERIK RL+ELE SR+V EKD KA +L Sbjct: 413 KKSATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRL 472 Query: 1412 AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXX 1591 AEMNR+NRVENFKNASELRPVN LKAGEAGYDPFSRRWTRS NY+ Sbjct: 473 AEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYFAKGASNGEAAAAAA 532 Query: 1592 XXXXXXXETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 +GG A KLVDT APVDQGTES LH+ Sbjct: 533 LAAEDNNGAGGTADGGMAA--------TAAALQAAAGAGKLVDTNAPVDQGTESNTLHD 583 >ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum tuberosum] Length = 652 Score = 563 bits (1451), Expect = e-158 Identities = 311/539 (57%), Positives = 367/539 (68%), Gaps = 22/539 (4%) Frame = +2 Query: 218 YSSRKPSASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDRE 397 YS RK S SQVPLKKRLDP LYKD+DDR+ Sbjct: 54 YSGRKLSGSQVPLKKRLDP-QERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQ 112 Query: 398 KLSKLTELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSMRSK------- 556 KL+++TELEREMIL RA K+SDR L +K+ K + Q RK S P + +R MRS Sbjct: 113 KLAQMTELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRA 172 Query: 557 AERAGALDELVKRR-------------RESAKGGSGKR-YSPVKRRSFAAATL-NSPXXX 691 A+R AL+E+ +R R++A+ GSG R YSP+KRRSF AATL +SP Sbjct: 173 ADRDDALNEIRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRG 232 Query: 692 XXXXXXXXXXXXXXXXLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 871 + DSDDDK S ES++PTFEDI+EI+IRRSKLAKWFMEP+FDELI Sbjct: 233 ESDSHSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELI 292 Query: 872 VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 1051 VGCFVRVGIG+SRSGPIYRLCVVRNVD++DP+RQYK +NKTT K+LNVVWGN++SAARWQ Sbjct: 293 VGCFVRVGIGRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQ 352 Query: 1052 MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 1231 MAM+SDSPPL++EFDQW+REVERSGG +PSKQ+VL+KK+AIQK NT+VY A TVKQM+++ Sbjct: 353 MAMVSDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQ 412 Query: 1232 KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 1411 KKSATWRPLNVAAEKDRLRR +EVAK DEAEVERIK RL+EL+ SR+V EKD KA +L Sbjct: 413 KKSATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQEKDDKARRL 472 Query: 1412 AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXX 1591 AEMNR+NRVENFKNASELRPVN LKAG+AGYDPFSRRWTRS NY+ Sbjct: 473 AEMNRKNRVENFKNASELRPVNQLLKAGQAGYDPFSRRWTRSTNYFA-KGANEEAEGASN 531 Query: 1592 XXXXXXXETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 N G + KLVDT APVDQGTES LH+ Sbjct: 532 GEVAAAAALAAEDNNGASGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHD 590 >ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1 [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X2 [Glycine max] Length = 656 Score = 546 bits (1407), Expect = e-152 Identities = 314/598 (52%), Positives = 378/598 (63%), Gaps = 28/598 (4%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADLE LLLEAAGRT Y+SRKPS Sbjct: 1 MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDREKLSKL 412 SQVPLKKRLDP LYKDEDDR KLS++ Sbjct: 61 GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSEM 120 Query: 413 TELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG-- 571 TEL+REMIL RATK+ D++L K+ K+ KG+ RK SPP + +R MR+ A A Sbjct: 121 TELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR-MRASARSADRS 179 Query: 572 ----ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXXX 703 AL+EL +R RE+++ + +SP KR+ F + +L+S Sbjct: 180 AKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSESES 239 Query: 704 XXXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVG 877 + DSDDD+ A S+ P+F+D++EITIRRSKLAKWFMEP+F+ELIVG Sbjct: 240 RSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEELIVG 299 Query: 878 CFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMA 1057 CFVRVGIG+S++GPIYRLC+V+NVDA++PDRQYK +NKTT+KYLNVVWGN+SSAARWQMA Sbjct: 300 CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359 Query: 1058 MISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKK 1237 M+SDS PL+EEF QW++EV+RSGG +PSKQ+VL+KK AIQK T+VY AATVKQM++EKK Sbjct: 360 MVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419 Query: 1238 SATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAE 1417 SA+ RPLNVAAEKDRLRR LE+A+ DEAEVERIKTRL ELEASR+ +KD+KA+KLAE Sbjct: 420 SASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALKLAE 479 Query: 1418 MNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXX 1597 MNR+NR ENFKNASE++PVN GLKAGEAGYDPFSRRWTRSRNYY Sbjct: 480 MNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNSVN 539 Query: 1598 XXXXXETLIVKNGGGA-VFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 NG GA V KLVDT APVDQGTES MLHN Sbjct: 540 GNVAGAG---SNGTGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHN 594 >ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine max] Length = 656 Score = 544 bits (1401), Expect = e-152 Identities = 314/598 (52%), Positives = 379/598 (63%), Gaps = 28/598 (4%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADLE LLLEAAGRT Y+SRKPS Sbjct: 1 MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDREKLSKL 412 SQVPLKKRLDP LYKDEDDR KLS++ Sbjct: 61 GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120 Query: 413 TELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG-- 571 TEL+REMIL RATK+ D++L K+ K+ KG+ RK SPP + +R MR+ A A Sbjct: 121 TELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASARSADRS 179 Query: 572 ----ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXXX 703 AL+EL +R RE+++ + +SP KR++F + +L+S Sbjct: 180 AKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSESES 239 Query: 704 XXXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVG 877 +ADSDDD+ A S+ P+F+DI+EITIRRSKLAKWFMEP+F+ELIVG Sbjct: 240 RSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVG 299 Query: 878 CFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMA 1057 CFVRVGIG+S++GPIYRLC+V+NVDA++PDRQYK +NKTT+KYLNVVWGN+SSAARWQMA Sbjct: 300 CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359 Query: 1058 MISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKK 1237 M+SDS P++EEF QW++EV+ SGG +PSKQ+VL+KK AIQK T+VY AATVKQM++EKK Sbjct: 360 MVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419 Query: 1238 SATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAE 1417 SA+ RPLNVAAEKDRLRR LE+A+ DEAEVERIKTRL+ELEASR+ +KD+KA+KLAE Sbjct: 420 SASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAE 479 Query: 1418 MNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXX 1597 MNR+NR ENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYY Sbjct: 480 MNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNIVN 539 Query: 1598 XXXXXETLIVKNGGGA-VFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 N GA V KLVDT APVDQGTES MLHN Sbjct: 540 GNVAGAG---SNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHN 594 >ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis] gi|223541691|gb|EEF43239.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis] Length = 660 Score = 542 bits (1396), Expect = e-151 Identities = 307/599 (51%), Positives = 375/599 (62%), Gaps = 29/599 (4%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADLE LLLEAAGRT YSSRKPS Sbjct: 1 MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LYKDEDDREKLSK 409 SQVPLKKRLDP LYK+EDDR KL++ Sbjct: 61 GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120 Query: 410 LTELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG- 571 ++ELEREMIL RA K+ D++LTE+++ ++ +R K +PP +R +R+ A A Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180 Query: 572 ------ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXX 694 AL+EL RR R++++ GSG R +SP+KR+ F +A+L+S Sbjct: 181 AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSSES 240 Query: 695 XXXXXXXXXXXXXXX-LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 871 +ADSDDD S+ PTF+DIREITIRRSKLAKWFMEP+F+ELI Sbjct: 241 ESRSHSEDEGSTGDGGMADSDDDG-EPGSQGPTFDDIREITIRRSKLAKWFMEPWFEELI 299 Query: 872 VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 1051 VGCFVRVGIG+S+SGPIYRLC+VRNVDA DPDR YK +NKTT+KYLNV+WGN+SSAARWQ Sbjct: 300 VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 359 Query: 1052 MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 1231 MAMISDS P ++E+ QW+REVERSGG +P+KQ++L+KK+AI+K NT+VY AATVKQM++E Sbjct: 360 MAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQE 419 Query: 1232 KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 1411 KKSA+ RPLNVAAEKDRLRR LEVA+ +D+AEVERI+ R++ELEASR+ KD+KAI+L Sbjct: 420 KKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIRL 479 Query: 1412 AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXX 1591 AEMNR+NR ENF+NASEL+PVN LKAGEAGYDPFSRRWTRSRNYYV Sbjct: 480 AEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAATN 539 Query: 1592 XXXXXXXETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 V KLVDT APVDQGTES LHN Sbjct: 540 NEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHN 598 >ref|XP_007159299.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris] gi|561032714|gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris] Length = 654 Score = 541 bits (1394), Expect = e-151 Identities = 309/598 (51%), Positives = 375/598 (62%), Gaps = 28/598 (4%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADLE LLLEAAGRT Y+SRKPS Sbjct: 1 MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LYKDEDDREKLSK 409 SQVPLKKRLDP+ LYKDEDDR KLS+ Sbjct: 61 GSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRRKLSE 120 Query: 410 LTELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG- 571 +TEL+REMIL RATK+ D++L K+ K+ KG+ RK SPP + +R MR+ A A Sbjct: 121 MTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSR-MRASARSADR 179 Query: 572 -----ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXX 700 AL+EL +R RE+++ + +SP KR+ F + +L+S Sbjct: 180 SAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHSESE 239 Query: 701 XXXXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIV 874 + DSDDD+ S+ P+F+DI+EITIRRSKLAKWFMEP+F+ELIV Sbjct: 240 SRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIV 299 Query: 875 GCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQM 1054 GCFVRVGIG+S++GPIYRLC+V+NVDA++PDRQYK +NKTT+KYLNVVWGN+SSAARWQM Sbjct: 300 GCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQM 359 Query: 1055 AMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEK 1234 AM+SDS PL+EEF QW++EV+RSGG +P+KQ+VL+KK AIQK T+VY AATVKQM++EK Sbjct: 360 AMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQEK 419 Query: 1235 KSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLA 1414 KSA+ RPLNVAAEKDRLRR LE+A+ DEAEV+RIK RL+ELEASR +KD+KA+KLA Sbjct: 420 KSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKALKLA 479 Query: 1415 EMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXX 1594 EMNR+NR ENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYY Sbjct: 480 EMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGEKAAAGNNSVNGI 539 Query: 1595 XXXXXXETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 + G V KLVDT APVDQGTES MLHN Sbjct: 540 VAGPG-----TNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNMLHN 592 >ref|XP_007025691.1| PAF1 complex component isoform 1 [Theobroma cacao] gi|590624750|ref|XP_007025692.1| PAF1 complex component isoform 1 [Theobroma cacao] gi|508781057|gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao] gi|508781058|gb|EOY28314.1| PAF1 complex component isoform 1 [Theobroma cacao] Length = 660 Score = 540 bits (1390), Expect = e-150 Identities = 309/603 (51%), Positives = 376/603 (62%), Gaps = 33/603 (5%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADLE LLLEAAGRT Y+SRKPS Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LYKDEDDREKLSK 409 SQVPLKKRLDPA LYK+EDDR KL++ Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120 Query: 410 LTELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG- 571 +TELERE+IL RA KR D+ TEK++ ++ DR K +PP +R +RS A A Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180 Query: 572 ------ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXX 694 AL+EL +R R++++G SG R SPVKR+ F A++L+S Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240 Query: 695 XXXXXXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDEL 868 + DSDDD+ PTF+DI+EITIRRSKLAKWFMEP+F+EL Sbjct: 241 SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300 Query: 869 IVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARW 1048 IVGC+VRVGIG+S+SGPIYRLC+VRNVDAT+P+R YK +NKTT+KYLNVVWGN+SSAARW Sbjct: 301 IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360 Query: 1049 QMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVK 1228 QMAMISDSPP +EEF Q +RE+ERSGG +PSKQ+VL+KK+A+QK T+VY AATVKQM++ Sbjct: 361 QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420 Query: 1229 EKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIK 1408 EKKS + RPLN+AAEKDRLRR LE+A+ DEAEVERIK RL++LEASR+ EKD+KA++ Sbjct: 421 EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480 Query: 1409 LAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXX 1588 LAEMNR+NR ENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYYV Sbjct: 481 LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540 Query: 1589 XXXXXXXXETLIVKNGGG---AVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYM 1759 ++ +G G KLVDT APVD+GTES M Sbjct: 541 NGDRIG-----VIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNM 595 Query: 1760 LHN 1768 LH+ Sbjct: 596 LHD 598 >ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1 [Cicer arietinum] gi|502142571|ref|XP_004505023.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X2 [Cicer arietinum] Length = 658 Score = 532 bits (1370), Expect = e-148 Identities = 312/603 (51%), Positives = 376/603 (62%), Gaps = 33/603 (5%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-YSSRKP 235 MADLE LLLEAAGRT Y SRKP Sbjct: 1 MADLENLLLEAAGRTGGAAGRNRHSIPPSRRRRDGSYSDGGSDSRDDDSDDELNYPSRKP 60 Query: 236 SASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LYKDEDDREKLS 406 S SQVPLKKRLDP LYKDEDDR KLS Sbjct: 61 SGSQVPLKKRLDPTERDDDLGSQEEADDDDGRSDREGDSSDESNIGDDLYKDEDDRRKLS 120 Query: 407 KLTELEREMILEARATKRSDRDLTEKL--KKRKGQ---DRKGSPPKAPTRSMRSKAERAG 571 +++EL+REMIL RA+K+ D+ L K+ K+ KG+ K SPP + +R MR+ A A Sbjct: 121 EMSELQREMILSDRASKKDDKSLLGKIASKREKGKAIMTGKQSPPLSSSR-MRASARSAD 179 Query: 572 ------ALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXX 697 AL+EL +R RE+++ +R+SP KR+SF +A L+S Sbjct: 180 RSAKNVALNELRAKRLKQQDPEARRRLREASRNSGPRRFSPPKRKSFTSANLSSSSHSDS 239 Query: 698 XXXXXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 871 +ADSDDD+ + S+ P+F+DI+EITIRRSKLAKWFMEP+F+ELI Sbjct: 240 DSRSHSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELI 299 Query: 872 VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 1051 VGCFVRVGIG+S++GPIYRLC+V+NVD++DPDRQYK +N+TTHKYLNVVWGN+SSAARWQ Sbjct: 300 VGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENRTTHKYLNVVWGNESSAARWQ 359 Query: 1052 MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 1231 MAM+SDS PL+EEF QW++EVERSGG +P+KQ+VL+KK AIQK T+VY A TVKQM++E Sbjct: 360 MAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQAIQKIITFVYSADTVKQMLQE 419 Query: 1232 KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 1411 KKS++ RPLNVAAEKDRLRR +E+A+ DEAEVERIKTR++ELEASR KD+KA+KL Sbjct: 420 KKSSSSRPLNVAAEKDRLRREMEIAQSKNDEAEVERIKTRVQELEASRHAKVKDAKALKL 479 Query: 1412 AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXX 1591 AEMNR+NR ENFKNASELRPVN GLKAGEAGYDPFSRRWTRSRNYYV Sbjct: 480 AEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWTRSRNYYV------AKPGEKA 533 Query: 1592 XXXXXXXETLIVKNG----GGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYM 1759 L+ G G V KLVDT APVDQGTES Sbjct: 534 AARKNTTNVLVADAGSNITGVPVTAESGVVATAAALEAAADAGKLVDTSAPVDQGTESNF 593 Query: 1760 LHN 1768 LHN Sbjct: 594 LHN 596 >gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis] Length = 658 Score = 531 bits (1369), Expect = e-148 Identities = 301/596 (50%), Positives = 370/596 (62%), Gaps = 26/596 (4%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MA+LE LLLEAAGRT Y++RKPS Sbjct: 1 MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDREKLSKLTE 418 SQVPLKKRLDP LYKD+DDR KL+++TE Sbjct: 61 GSQVPLKKRLDPTEMDDDQGSEEEGDDDRGSDREGDSESDVGSDLYKDDDDRRKLAEMTE 120 Query: 419 LEREMILEARATKRSDRDLTEKLKKR---KG---QDRKGSP-PKAPTRSMRSKAERAGAL 577 L+REMIL RA+K+ D++L EKL+ + KG Q RK +P P + RS A+RA A Sbjct: 121 LQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKETPLPSSRVRSSARSADRAAAK 180 Query: 578 DELVK----------------RRRESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXXXX 706 D+ + + R++++GGSG R KR+S+ A +L+S Sbjct: 181 DDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSDSESE 240 Query: 707 XXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 880 + DSDD++ S+ TF+DI+E+T+RRSKLAKW MEP+F+ELIVGC Sbjct: 241 SQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEELIVGC 300 Query: 881 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 1060 FVRVGIG+S+SGPIYRLC+VRNVDA++PDRQYK DNK THKYLNVVWGN++SAARWQMAM Sbjct: 301 FVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARWQMAM 360 Query: 1061 ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 1240 +SDS P +EEF QW+REVERSGG +P+K ++LDKK++I+K NT+VY AATVKQM++EKKS Sbjct: 361 VSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQEKKS 420 Query: 1241 ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 1420 A+ RPLN+A EKDRLRR LEVA+ DE EV+RIKTRL+ELEASR+ + D+KAI+LAEM Sbjct: 421 ASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIRLAEM 480 Query: 1421 NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXX 1600 NR+NRVENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYYV Sbjct: 481 NRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGANAGN 540 Query: 1601 XXXXETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 G V KLVDT APVDQGT S MLHN Sbjct: 541 NGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHN 596 >ref|XP_007217631.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica] gi|462413781|gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica] Length = 646 Score = 520 bits (1340), Expect = e-145 Identities = 300/592 (50%), Positives = 366/592 (61%), Gaps = 22/592 (3%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADLE LLLEAAGRT Y+SRKPS Sbjct: 1 MADLENLLLEAAGRTSSAGKSRHSHSSSRRRRGGSYSDGGSDSRGDDSDDGRGYASRKPS 60 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDREKLSKL 412 +QVPLKKRLDP LYKDEDDR KL+++ Sbjct: 61 GTQVPLKKRLDPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRKLAEM 120 Query: 413 TELEREMILEARATKRSDRDLTEKLKKRKGQDRKGSPPKAPTRSMRSKAERAGALDELV- 589 +EL+RE+IL RA K+ D+ L EK + +K P + RS A+RA A D+ + Sbjct: 121 SELQRELILSDRAQKKDDKSLKEKFRPKK---ETPPLPSSRVRSSARSADRAAAKDDALN 177 Query: 590 ---------------KRRRESAKGGSGKR-YSPVKRRSFAAA--TLNSPXXXXXXXXXXX 715 ++ R++++G SG R +S + R+SF A + +S Sbjct: 178 ELRAKRLKQQDPEAHRKLRDASRGSSGSRSFSHMTRKSFTAVGRSSSSQSDSDSRSHSED 237 Query: 716 XXXXXXXXLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGCFVRVG 895 + DSDD++ S+ TF+DI+EITIRRSKLAKW MEP+F+ELIVGCFVRVG Sbjct: 238 DGSTGEDPMMDSDDER----SEGLTFDDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVG 293 Query: 896 IGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAMISDSP 1075 IG+S+SGPIYRLC+VRNVDA+DPDR+YK +NKTTHKYLNVVWGN++SAARWQMAMISDS Sbjct: 294 IGRSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAARWQMAMISDSA 353 Query: 1076 PLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKSATWRP 1255 PL+EEF QW+REVERSGG LPSKQ+VL+KK+AI+K NT+VY AATVKQM++EKKSA+ RP Sbjct: 354 PLEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMIEEKKSASSRP 413 Query: 1256 LNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEMNRRNR 1435 LN+A EKDRLRR LEVA+ D+AEVERIKTRL++LEA R+ KDSKA++LAEMNR+NR Sbjct: 414 LNIALEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEARRQSQGKDSKAVRLAEMNRKNR 473 Query: 1436 VENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXXXXXXE 1615 VENFKNASEL+PV GLKAGEAGYDPFSRRWTRSRNYYV Sbjct: 474 VENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAEAIVDADGALA 533 Query: 1616 TLIVKNGGGAV-FXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 I NG V KL+DT APVD GTES ++HN Sbjct: 534 D-IESNGTAVVGAVRAGMAATAAALEAAAGAGKLIDTSAPVDFGTESNLMHN 584 >ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis sativus] Length = 660 Score = 516 bits (1329), Expect = e-143 Identities = 297/599 (49%), Positives = 368/599 (61%), Gaps = 29/599 (4%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADLE LLLEAAGRT Y+SRKPS Sbjct: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LYKDEDDREKLSK 409 SQVPLKKRLDP LYKD+DDR KL+ Sbjct: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120 Query: 410 LTELEREMILEARATKRSDRDLTEKLKKR--KGQD---RKGSPP--KAPTRSMRSKAERA 568 ++EL+REMIL RA+K++D+ L E L+ + KG+ RK +PP + RS A+RA Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180 Query: 569 GALDELV----------------KRRRESAKGGSG-KRYSPVKRRSFAAATLNSPXXXXX 697 A D+ + ++ R++++G + +R+SP KR+ F A +L+S Sbjct: 181 AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240 Query: 698 XXXXXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELI 871 + DSDD++ S PTFEDI+E+TIRRSKLAKW MEP+F+ELI Sbjct: 241 ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300 Query: 872 VGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQ 1051 VGCFVRVGIG+SRSGPIYRLC+VRNVDAT+PDRQYK +NK THKYLNV+WGN++SAARWQ Sbjct: 301 VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360 Query: 1052 MAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKE 1231 MAM+SDS PL++E+ QW++EVER+GG + SKQ++L+KK+AIQK N +VY AATVKQM+++ Sbjct: 361 MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420 Query: 1232 KKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKL 1411 KKSA+ RPLN+AAEKDRLRR ++VA DEAEVERIKTRL++LEASRR+ KD+KAI+L Sbjct: 421 KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480 Query: 1412 AEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXX 1591 AEMNR+NRVENFKNASELRP+ LKAGEAGYDPFSRRWTRSRNYYV Sbjct: 481 AEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAA 539 Query: 1592 XXXXXXXETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 L KLVDT APVD GTES LHN Sbjct: 540 GNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHN 598 >ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1 [Cicer arietinum] gi|502110282|ref|XP_004493843.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X2 [Cicer arietinum] Length = 653 Score = 516 bits (1328), Expect = e-143 Identities = 305/601 (50%), Positives = 370/601 (61%), Gaps = 31/601 (5%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADLEKLLLEAAGR Y RKPS Sbjct: 1 MADLEKLLLEAAGRNIHSLTPSRRKRRGEFLDGGSDSGDDDSDDDGDDHG---YRGRKPS 57 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDREKLSKLTE 418 A+QVPLKKR + + LYKDEDDR+KLS++TE Sbjct: 58 ATQVPLKKRFETSGKDDDVSGDDDGSDREGDSSEDSDVGDD---LYKDEDDRQKLSEMTE 114 Query: 419 LEREMILEARATKRSDRDLTEKL--KKRKGQ----DRKGSPP--------KAPTRSMRSK 556 L+REMIL RA+K+ D+D K+ K+ KG R+ SPP +A RS Sbjct: 115 LQREMILSDRASKKDDKDFLGKIASKREKGAKATLSRRESPPPPLLSSRVRASARSADRS 174 Query: 557 AERAGALDELVKRR------------RESAKGGSGKRYSPVKRRSFAAATLNSPXXXXXX 700 A + GAL+EL +R +E +K G G+ +K + FA+ L+S Sbjct: 175 AAKDGALNELRAKRLKQLDPEAKLKLKEGSKSG-GRGLFSLKGKPFASTGLSSSSHSDSD 233 Query: 701 XXXXXXXXXXXXX--LADSDDDKISAES--KVPTFEDIREITIRRSKLAKWFMEPYFDEL 868 + DSDDD+I S +VP+FEDI+EITIRRSKLAKWFMEP+F+EL Sbjct: 234 SRSRSDDEGSNGDGGIIDSDDDRIMTGSGFEVPSFEDIKEITIRRSKLAKWFMEPFFEEL 293 Query: 869 IVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARW 1048 IVGCFVRVGIG+S++GPIYRLC+V+NVDA+DPDRQYK DNKTT+KYLNVVWGN++SAARW Sbjct: 294 IVGCFVRVGIGRSKTGPIYRLCMVKNVDASDPDRQYKLDNKTTYKYLNVVWGNETSAARW 353 Query: 1049 QMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVK 1228 QMAM+SDSPPL+EEF QW++EVERSGG + K +V++K AIQK N++VY AATVKQM++ Sbjct: 354 QMAMVSDSPPLEEEFKQWVKEVERSGGRMLMKLDVMEKNQAIQKINSFVYSAATVKQMIE 413 Query: 1229 EKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIK 1408 EKKS + RPLNVAAEKDRL+R LE+A+ KD AEVE+IKTRL+ELEASR+ KD+KA++ Sbjct: 414 EKKSNSRRPLNVAAEKDRLKRQLEIAESKKDAAEVEKIKTRLQELEASRKTQAKDAKALR 473 Query: 1409 LAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXX 1588 L+EMNR+NR ENFKNASEL+PVN GLKAGEAGYDPFSRRWTRSRNYY Sbjct: 474 LSEMNRKNRFENFKNASELKPVNKGLKAGEAGYDPFSRRWTRSRNYYNAKQAEEAAAGNN 533 Query: 1589 XXXXXXXXETLIVKNGGGA-VFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLH 1765 NG GA V KLVDTRAPVDQGTES LH Sbjct: 534 SSGGAVGDRG---SNGVGATVAGEAGVVATAEALEAAADAGKLVDTRAPVDQGTESNFLH 590 Query: 1766 N 1768 N Sbjct: 591 N 591 >ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa] gi|222848649|gb|EEE86196.1| plus-3 domain-containing family protein [Populus trichocarpa] Length = 662 Score = 511 bits (1317), Expect = e-142 Identities = 295/601 (49%), Positives = 371/601 (61%), Gaps = 31/601 (5%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-YSSRKP 235 MADLE LLLEAAGRT Y++RKP Sbjct: 1 MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60 Query: 236 SASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LYKDEDDREKLS 406 S SQVPLKKRL+ LYKDEDDR+KL+ Sbjct: 61 SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120 Query: 407 KLTELEREMILEARATKRSDRDLTEKLKKRKGQD-----RKGSPPKAPTRSMRSKAERAG 571 +++EL+RE+IL RA K+ D+ LTEK++ ++ D RK +PP +R +RS A A Sbjct: 121 QMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180 Query: 572 -------ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXX 691 AL+EL +R R+ ++G +G R +S VK+ +F +A+L+S Sbjct: 181 RAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSSSSSE 240 Query: 692 XXXXXXXXXXXXXXXX-LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDEL 868 +ADSD+D + SK PT+EDI+EITIRR+KLAKWFMEP+F+EL Sbjct: 241 SGSRSHSEDEGSTGDGGMADSDED-VEPGSKGPTYEDIKEITIRRTKLAKWFMEPWFEEL 299 Query: 869 IVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARW 1048 I+GCFVRVGIG+S+SGP+YRLC+VRNVDA +PD+ YK +NK+T+KYLNV WG D+SAARW Sbjct: 300 IIGCFVRVGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSAARW 359 Query: 1049 QMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVK 1228 QMAM+SDS P +EE+ QW+REVE GG LPSKQ++L+KK+AI+K NT+VY AATVKQM++ Sbjct: 360 QMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQ 419 Query: 1229 EKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIK 1408 EKKSA+ RPLNVAAEKDRLRR LE+A+ DEAEVERI R++ELEASR KD+KAI+ Sbjct: 420 EKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRHAKVKDAKAIR 479 Query: 1409 LAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXX 1588 LAEMNR+NRVENF+NASE++PVN GLKAGEAGYDPFSRRWTRSRNYYV Sbjct: 480 LAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPAEADDPVAT 539 Query: 1589 XXXXXXXXETLIVKNGGGA-VFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLH 1765 + N A V KLVDT APVDQGTES +H Sbjct: 540 KISEANETVAVAASNQVVAGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQGTESNTMH 599 Query: 1766 N 1768 + Sbjct: 600 S 600 >ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa] gi|550327599|gb|EEE97240.2| plus-3 domain-containing family protein [Populus trichocarpa] Length = 664 Score = 509 bits (1312), Expect = e-141 Identities = 294/605 (48%), Positives = 372/605 (61%), Gaps = 35/605 (5%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-YSSRKP 235 MADLE LLLEAAGRT Y+SRKP Sbjct: 1 MADLENLLLEAAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRKP 60 Query: 236 SASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LYKDEDDREKLS 406 S SQVPLKKRL+ LYKDEDDR+KL+ Sbjct: 61 SGSQVPLKKRLETNERDDEGGSQEEGDYDDGGSDREGESSDGSDIGDDLYKDEDDRQKLA 120 Query: 407 KLTELEREMILEARATKRSDRDLTEKLKKRKGQD-----RKGSPPKAPTRSMRSKAERAG 571 +++EL+RE+IL RA K+ D+ LTEK++ ++ D RK +PP +R +RS A A Sbjct: 121 QMSELDRELILADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180 Query: 572 -------ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXX 691 AL+EL +R R++++G +G R ++ VK+ +F +A L+S Sbjct: 181 RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARLSSSSSE 240 Query: 692 XXXXXXXXXXXXXXXX---LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFD 862 +ADSD+D S+ PT+EDI+EITIRR+KLAKWFMEP+F+ Sbjct: 241 SESGSRSHSEDEGSTGDGGMADSDEDG-DPGSRGPTYEDIKEITIRRTKLAKWFMEPWFE 299 Query: 863 ELIVGCFVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAA 1042 ELI+GCFVRVGIG+S++GP+YRLC+VRNVDA +PD+ YK +NK+T+KYLNV WG DSSAA Sbjct: 300 ELIIGCFVRVGIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADSSAA 359 Query: 1043 RWQMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQM 1222 RWQMAM+SDS P +EE+ QW+RE ER GG LPSKQ++L+KK+AI+K NT+VY AATVKQM Sbjct: 360 RWQMAMVSDSAPTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQM 419 Query: 1223 VKEKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKA 1402 ++EKKSA+ RPLNVAAEKDRLRR LE+A+ DEAEVERI+ R+ ELEASR+ KD+KA Sbjct: 420 LQEKKSASSRPLNVAAEKDRLRRELEIAQSRHDEAEVERIEARILELEASRQAKVKDAKA 479 Query: 1403 IKLAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXX 1582 ++LAEMNR+NRVENF+NASEL+P+N GLKAGEAGYDPFSRRWTRSRNYYV Sbjct: 480 LRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYV--SNPAGGDD 537 Query: 1583 XXXXXXXXXXETLIVKNGGGAV---FXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTES 1753 +T V + V KLVDT APVDQGTES Sbjct: 538 AVAASNSEANDTAAVADSDHVVAGAMSESGVAATAAALDAAADAGKLVDTSAPVDQGTES 597 Query: 1754 YMLHN 1768 +HN Sbjct: 598 NTMHN 602 >ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina] gi|557524836|gb|ESR36142.1| hypothetical protein CICLE_v10028000mg [Citrus clementina] Length = 643 Score = 504 bits (1298), Expect = e-140 Identities = 295/596 (49%), Positives = 361/596 (60%), Gaps = 26/596 (4%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADLE LLLEAAGRT Y SRKPS Sbjct: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG--YGSRKPS 58 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDREKLSKLTE 418 SQVPLKKRLDPA +E D + ++TE Sbjct: 59 GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDS--------SNESDDDNHGQMTE 110 Query: 419 LEREMILEARATKRSDRDLTEKLKKRKGQ----DRKGSPPKAPTRSMR---SKAERAGAL 577 LEREM++ R K+ D++L +K + R+ + K +PP +RS R A+RA A Sbjct: 111 LEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAK 170 Query: 578 DELV----------------KRRRESAKGGSGKRY-SPVKRRSFAAATLNSPXXXXXXXX 706 D+ + +R R++++GGSG R SPVKR++F A L+S Sbjct: 171 DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230 Query: 707 XXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 880 +ADSDDD + PT++DI+EITIRRSKLAKWFMEP+F+ELIVGC Sbjct: 231 SHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289 Query: 881 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 1060 FVRVGIG+S++GPIYRLC+VRNVDAT+PDR YK +N+TT KYLNV WGN+SSAARWQMAM Sbjct: 290 FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349 Query: 1061 ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 1240 +SDSPPL+EEF QW+REVER+GG +PSKQ+VL+KK++IQK NT+VY AATVKQM++EKKS Sbjct: 350 VSDSPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKS 409 Query: 1241 ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 1420 A+ RPLNVAAEKDRLRR LEVA+ D+ ++ERIK RL+ELEASR KD+KAI+LAEM Sbjct: 410 ASSRPLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQELEASRDSKVKDAKAIRLAEM 469 Query: 1421 NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXX 1600 NR+NRVENFKNASEL+ VN LKAGEAGYDPFSRRWTRSRNYY+ Sbjct: 470 NRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKN 529 Query: 1601 XXXXETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 NG KLVDT AP+D GTES MLH+ Sbjct: 530 GVPGGA----NGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHD 581 >ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1 [Citrus sinensis] gi|568867309|ref|XP_006486981.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X2 [Citrus sinensis] Length = 643 Score = 503 bits (1295), Expect = e-139 Identities = 295/596 (49%), Positives = 359/596 (60%), Gaps = 26/596 (4%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADLE LLLEAAGRT Y SRKPS Sbjct: 1 MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNRG--YGSRKPS 58 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLYKDEDDREKLSKLTE 418 SQVPLKKRLDP +E D + ++TE Sbjct: 59 GSQVPLKKRLDPTERDDDQGSQEEGDYDGGASEHEGDS--------SNESDDDNHGQMTE 110 Query: 419 LEREMILEARATKRSDRDLTEKLKKRKGQ----DRKGSPPKAPTRSMR---SKAERAGAL 577 LEREM++ R K+ D++L +K + R+ + K +PP +RS R A+RA A Sbjct: 111 LEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAK 170 Query: 578 DELV----------------KRRRESAKGGSGKRY-SPVKRRSFAAATLNSPXXXXXXXX 706 D+ + +R R++++GGSG R SPVKR++F A L+S Sbjct: 171 DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230 Query: 707 XXXXXXXXXXX--LADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 880 +ADSDDD + PT++DI+EITIRRSKLAKWFMEP+F+ELIVGC Sbjct: 231 SHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289 Query: 881 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 1060 FVRVGIG+S++GPIYRLC+VRNVDAT+PDR YK +N+TT KYLNV WGN+SSAARWQMAM Sbjct: 290 FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349 Query: 1061 ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 1240 +SDSPPL+EEF QW+REVER+ G +PSKQ+VL+KKD+IQK NT+VY AATVKQM++EKKS Sbjct: 350 VSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQMLQEKKS 409 Query: 1241 ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 1420 A+ RPLNVAAEKDRLRR LEVA+ DE ++ERIK RL+ELEASR KD+KAI+LAEM Sbjct: 410 ASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEM 469 Query: 1421 NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXX 1600 NR+NRVENFKNASEL+ VN LKAGEAGYDPFSRRWTRSRNYY+ Sbjct: 470 NRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISKPGEEVTAEANGDKN 529 Query: 1601 XXXXETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 NG KLVDT AP+D GTES MLH+ Sbjct: 530 GVPGGA----NGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHD 581 >ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria vesca subsp. vesca] Length = 657 Score = 499 bits (1284), Expect = e-138 Identities = 291/607 (47%), Positives = 364/607 (59%), Gaps = 37/607 (6%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 MADL+ LLLEAAGRT Y+SRKPS Sbjct: 1 MADLDDLLLEAAGRTSSGRKSRHSHSSSKRRRDDSYSDGGSDSRGDDSDDGRGYASRKPS 60 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LYKDEDDREKLSKL 412 SQVPLKKRLDP+ LYKDE+DR KL+++ Sbjct: 61 GSQVPLKKRLDPSEVGDEHDSQDEGDYNDSGSDRGGESNESDVGSDLYKDENDRRKLAEM 120 Query: 413 TELEREMILEARATKRSDRDLTEKLKKR--KG---QDRKGSPP--KAPTRSMRSKAERAG 571 +EL+RE+IL RA K+ D+ L EK + + KG Q RK +PP + RS A+RA Sbjct: 121 SELQRELILSDRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPLPSSRVRSSARSADRAA 180 Query: 572 ALDELV----------------KRRRESAKGGSG-KRYSPVKRRSFAAATLNSPXXXXXX 700 A D+ + ++ R+ ++G G K +S ++SF+A +S Sbjct: 181 AKDDALNELRAKRLKQQDPEAHRKLRDVSRGSVGSKNFSHTIKKSFSAVRRSSSSQSDSE 240 Query: 701 XXXXXXXXXXXXXLADSDDDKISAESKVP----------TFEDIREITIRRSKLAKWFME 850 + SDDD SA+ + TFEDI+EITIRRS+LAKW ME Sbjct: 241 SR------------SHSDDDGSSADDAIDSDDERGNQGLTFEDIKEITIRRSRLAKWLME 288 Query: 851 PYFDELIVGCFVRVGIGKSRSG-PIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGN 1027 P+F+ELIVGC VRVGIGK++SG PIYRLC V NVD++DPDRQYK +NKTTHKYLNVVWGN Sbjct: 289 PFFEELIVGCCVRVGIGKTKSGRPIYRLCSVCNVDSSDPDRQYKLENKTTHKYLNVVWGN 348 Query: 1028 DSSAARWQMAMISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAA 1207 ++SAARWQMAM+SDS PL+EE+DQW+REVE++GG LPSK++VL+KK+AI+K NT+VY A Sbjct: 349 ENSAARWQMAMVSDSLPLEEEYDQWVREVEKNGGRLPSKEDVLEKKEAIKKTNTFVYSAK 408 Query: 1208 TVKQMVKEKKSATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLE 1387 TVKQM++EKKSA+ RPLN+A EKDRLRR LE+A+ D+AEVERIK RL++LEA ++ Sbjct: 409 TVKQMIQEKKSASSRPLNIALEKDRLRRELEIAQSKHDDAEVERIKARLEQLEARQQSQG 468 Query: 1388 KDSKAIKLAEMNRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXX 1567 KDSKA++LAEMNR+NRV+NFKNAS L+PV GLKAGEAGYDPFSRRWTRSRNYYV Sbjct: 469 KDSKAVRLAEMNRKNRVDNFKNASGLKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPDE 528 Query: 1568 XXXXXXXXXXXXXXXETLIVKNGGGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGT 1747 + GG V KL+DT APVDQGT Sbjct: 529 QKDDAEANAVAAESLAEVETNGTGGVVAVRAGLEATAAALEAAAGAGKLIDTMAPVDQGT 588 Query: 1748 ESYMLHN 1768 S LHN Sbjct: 589 SSNPLHN 595 >ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata] gi|297333952|gb|EFH64370.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata] Length = 643 Score = 493 bits (1268), Expect = e-136 Identities = 285/599 (47%), Positives = 363/599 (60%), Gaps = 29/599 (4%) Frame = +2 Query: 59 MADLEKLLLEAAGRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSSRKPS 238 M DLE LLLEAAGRT Y+SRKPS Sbjct: 1 MGDLENLLLEAAGRTNSAGRSRHPPSSRRREGSYSDGSSDSRDDSDEDRG---YASRKPS 57 Query: 239 ASQVPLKKRLDPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LYKDEDDREKLSKLT 415 SQVPLKKRL+ LYK+E+DR+KL+ +T Sbjct: 58 GSQVPLKKRLEAEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGMT 117 Query: 416 ELEREMILEARATKRSDRDLTEKLKKRKGQDR-----KGSPPKAPTRSMRSKAERAG--- 571 E +REMIL RA K+ D++ TEKL+ ++ ++ K + P +R +RS A A Sbjct: 118 EFQREMILAERADKKGDKNFTEKLRSKRENEKTPVSKKETQPLPASRGVRSSARSADRAA 177 Query: 572 ----ALDELVKRR------------RESAKGGSGKR-YSPVKRRSFAAATLNSPXXXXXX 700 AL+EL +R R+++KGGSG R +S +KR+ A++ L+S Sbjct: 178 AKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSMKRKPLASSNLSSSSQSDSD 237 Query: 701 XXXXXXXXXXXXXLADSDDDKISAESKVPTFEDIREITIRRSKLAKWFMEPYFDELIVGC 880 + DSDDD+ S VPTFED++EITIRRSKLAKW MEP+F+ELIVGC Sbjct: 238 SRSQSDDEGSNAGMLDSDDDR----SDVPTFEDVKEITIRRSKLAKWLMEPFFEELIVGC 293 Query: 881 FVRVGIGKSRSGPIYRLCVVRNVDATDPDRQYKFDNKTTHKYLNVVWGNDSSAARWQMAM 1060 FVRVGIG+S+SGPIYRLC V+NVDATDPD+ YK +NKTTHKYLNVVWGN++SAARWQMAM Sbjct: 294 FVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAM 353 Query: 1061 ISDSPPLKEEFDQWMREVERSGGHLPSKQEVLDKKDAIQKPNTYVYDAATVKQMVKEKKS 1240 ISD PL+EE+ QW+REVER+ G +P+KQ++ +KK+AIQ+ N++VY A TVKQM++EKKS Sbjct: 354 ISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRINSFVYSAETVKQMLQEKKS 413 Query: 1241 ATWRPLNVAAEKDRLRRSLEVAKENKDEAEVERIKTRLKELEASRRVLEKDSKAIKLAEM 1420 A+ RP+NVAAEKDRLR+ LE+A+ DEA VERIKT++K+L+ASR D KA+KLAEM Sbjct: 414 ASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKTKIKQLDASRNKKGVDKKALKLAEM 473 Query: 1421 NRRNRVENFKNASELRPVNAGLKAGEAGYDPFSRRWTRSRNYYVXXXXXXXXXXXXXXXX 1600 N++NR ENFKNASE++ ++A LKAGEAGYDPFSRRWTRS NYY Sbjct: 474 NKKNRAENFKNASEVKSISASLKAGEAGYDPFSRRWTRSSNYY---------NGKNKGKD 524 Query: 1601 XXXXETLI---VKNGGGAVFXXXXXXXXXXXXXXXXXXXKLVDTRAPVDQGTESYMLHN 1768 ET + V+ G V KL+DTRAP+ QG E LHN Sbjct: 525 GEENETAVAAAVETNGADV--GAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHN 581