BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00010994
         (2191 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]  1253   0.0  
gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus...  1171   0.0  
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]  1066   0.0  
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    1063   0.0  
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]    1061   0.0  
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]   1061   0.0  
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]   1060   0.0  
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...  1059   0.0  
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...  1058   0.0  
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1056   0.0  
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...  1046   0.0  
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...  1044   0.0  
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...  1043   0.0  
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...  1040   0.0  
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]      1039   0.0  
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1038   0.0  
ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1029   0.0  
ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1029   0.0  
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1027   0.0  
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...  1027   0.0  

>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
          Length = 1195

 Score = 1253 bits (3242), Expect = 0.0
 Identities = 610/701 (87%), Positives = 651/701 (92%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            +GFYLCGR+YSFLAFSSNQLRDRSAWFFAED+ T+V  IK WMGKFTNRNVAKCAARMGQ
Sbjct: 497  QGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRKTSVVCIKTWMGKFTNRNVAKCAARMGQ 556

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYATVEVP +QAN K  DVERN Y+FSDGIGMIS+DLAKEVAEKLQ+ T LPCA+Q
Sbjct: 557  CFSSTYATVEVPSAQANSK-SDVERNGYIFSDGIGMISADLAKEVAEKLQLRTKLPCAYQ 615

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAGYKGVVACWPA  NG RLQLR SM+KFDS+HTTLEICSWTRFQPGFLNRQIVTLLS
Sbjct: 616  IRYAGYKGVVACWPAENNGHRLQLRPSMKKFDSDHTTLEICSWTRFQPGFLNRQIVTLLS 675

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
            +LEV D+ FWRMQELM++RLD ILEDPDMAFDVLT SC+D GNTAAMMLAAGFR   EPH
Sbjct: 676  SLEVCDENFWRMQELMIARLDGILEDPDMAFDVLTASCSDQGNTAAMMLAAGFRSHTEPH 735

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGML SIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVS PSLEDCFA 
Sbjct: 736  LRGMLMSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSKPSLEDCFAN 795

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HGSEFS+TKK+LEVI GLVVIAKNPCLHPGDVRILEAVDV GL HL+DCL+FPQKGERPH
Sbjct: 796  HGSEFSETKKDLEVIKGLVVIAKNPCLHPGDVRILEAVDVRGLHHLYDCLVFPQKGERPH 855

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWDD LIPPSK+SW PMDYEPGEVK KPR VTHSDIIEFFTKNM
Sbjct: 856  ANEASGSDLDGDLYFVTWDDTLIPPSKRSWLPMDYEPGEVKLKPREVTHSDIIEFFTKNM 915

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
            VNESLGTICNAHVVHAD S+YGALDEKCIKLAELAAIAVDFPKTGKIV+MPP+LKP++YP
Sbjct: 916  VNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPDLKPQMYP 975

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            DFMGKEELQSYKSTKILGKLYRR+RDAYN DYE S QLTYP++ I YD+ELE+TGS+DFI
Sbjct: 976  DFMGKEELQSYKSTKILGKLYRRVRDAYNLDYEASSQLTYPAD-ISYDQELEVTGSKDFI 1034

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
            ADAWSCKCSYDGQL GLLGQYKVNSEDEVVTGHIWSMPK SSKKQGELKERLKHAY+ALR
Sbjct: 1035 ADAWSCKCSYDGQLAGLLGQYKVNSEDEVVTGHIWSMPKFSSKKQGELKERLKHAYNALR 1094

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVL 1981
            KDYRKVFECM P FDQL DHEKNV YEQKASAWYQV+Y ++WV+KSKELQ++DD GKTVL
Sbjct: 1095 KDYRKVFECMAPGFDQLPDHEKNVLYEQKASAWYQVTYQDNWVKKSKELQELDDSGKTVL 1154

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSFAWIAADYL RIKIR+R+MENAIS KPIDSLGRYLADKI
Sbjct: 1155 LSFAWIAADYLARIKIRRRRMENAISGKPIDSLGRYLADKI 1195


>gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus]
          Length = 1196

 Score = 1171 bits (3030), Expect = 0.0
 Identities = 572/701 (81%), Positives = 627/701 (89%), Gaps = 1/701 (0%)
 Frame = +2

Query: 5    GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQC 184
            GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDK   V +IKNWMG+FTNRNVAKCAARMGQC
Sbjct: 499  GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKDIGVANIKNWMGRFTNRNVAKCAARMGQC 558

Query: 185  FSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQI 364
            FSSTYATVEVP  Q N KL D+ERN+YVFSDGIGM+S+DLA EVAEKLQ+ TNLP A+QI
Sbjct: 559  FSSTYATVEVPSKQVNSKLPDIERNDYVFSDGIGMLSADLAMEVAEKLQLTTNLPSAYQI 618

Query: 365  RYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLSA 544
            RYAGYKGVVACWPA  +G RL LR SM+KFDSNHT LEICSWTRFQPGFLNRQI+TLLSA
Sbjct: 619  RYAGYKGVVACWPAQSDGFRLSLRKSMKKFDSNHTVLEICSWTRFQPGFLNRQIITLLSA 678

Query: 545  LEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPHL 724
            LEV D+ FWRMQE M+SRL+ +LED D AFDVLT SCTD GNTAA+ML+AGF+P  EPHL
Sbjct: 679  LEVGDEIFWRMQETMISRLNQMLEDTDTAFDVLTSSCTDQGNTAAIMLSAGFKPQTEPHL 738

Query: 725  RGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAKH 904
            RGML+SIRV+QLGDLRE++RIFV SGRWLMGCLDELGVLE+GQCFIQVS PSLEDCF KH
Sbjct: 739  RGMLTSIRVAQLGDLRERARIFVPSGRWLMGCLDELGVLEHGQCFIQVSNPSLEDCFVKH 798

Query: 905  GSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPHP 1084
            GSEFS  KK LEVI GLV IAKNPCLHPGDVRILEAVD PGL HL+DCL+FPQKGERPH 
Sbjct: 799  GSEFSGAKKKLEVIKGLVAIAKNPCLHPGDVRILEAVDCPGLHHLYDCLVFPQKGERPHT 858

Query: 1085 NEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNMV 1264
            NEASGSDLDGDLYFVTWD+NL+PPSK+SW PM+Y PGEVK+ PR V H+DIIEFFTKNMV
Sbjct: 859  NEASGSDLDGDLYFVTWDENLMPPSKRSWTPMEYAPGEVKQLPREVKHTDIIEFFTKNMV 918

Query: 1265 NESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYPD 1444
            NESLG ICNAHVVHAD+S+YGALDEKCIKLAELAAIAVDFPKTGKIV+MP ELKPKLYPD
Sbjct: 919  NESLGAICNAHVVHADSSEYGALDEKCIKLAELAAIAVDFPKTGKIVTMPAELKPKLYPD 978

Query: 1445 FMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFIA 1624
            FMGK+E Q+YKS+KILGKLYR+I+D+ N DYE S + T  S NI YD+ELEI GS  FI 
Sbjct: 979  FMGKDEFQTYKSSKILGKLYRKIKDS-NYDYEESSENT--SVNIAYDQELEIAGSESFIT 1035

Query: 1625 DAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALRK 1804
            DAW+CKCSYDGQL GLLGQYKVNSE+EVVTGHIWSMPK SSKKQGELKERLKHAYS LRK
Sbjct: 1036 DAWNCKCSYDGQLTGLLGQYKVNSEEEVVTGHIWSMPKYSSKKQGELKERLKHAYSTLRK 1095

Query: 1805 DYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDP-GKTVL 1981
            D+RKVFE M  +FDQLSD EKN  +E+KASAWYQV+Y+ESWV+KSK+LQ VDD  GKTV+
Sbjct: 1096 DFRKVFESMDAEFDQLSDDEKNTMFERKASAWYQVTYNESWVKKSKDLQVVDDEVGKTVM 1155

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSFAWIAADYL RIKIR+R+MENAIS KPIDSLGRYLADKI
Sbjct: 1156 LSFAWIAADYLARIKIRRRRMENAISMKPIDSLGRYLADKI 1196


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score = 1066 bits (2757), Expect = 0.0
 Identities = 520/701 (74%), Positives = 591/701 (84%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            KGF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WMG+F+NRNVAKCAARMGQ
Sbjct: 497  KGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQ 556

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYATVEVP S+ N +L D+ERN YVFSDGIGMIS+DLA EVAEKL +  N P A+Q
Sbjct: 557  CFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPAAYQ 616

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAG KGVVACWP   +G RL LR SM+KFDSNHT LEICSWTRFQPGFLNRQIVTLLS
Sbjct: 617  IRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLS 676

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
            +L+V+D  FW MQ+ M++ LD +L D D+AFDV+T SC + GNTAA+ML+AGF+P +EPH
Sbjct: 677  SLDVKDGIFWEMQKEMIAGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPH 736

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGMLSSIR SQLGDLR K+RIFV SGRWLMGCLDELG LE GQCFIQVS+PSLE+CF K
Sbjct: 737  LRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVK 796

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HGS+FS  KKNL+V+ GLVVIAKNPCLHPGDVRILEAVDVP L HL+DCL+FPQKG+RPH
Sbjct: 797  HGSKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPH 856

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWD+N+IPPSKKSW PM+YEP EVK+  R V H DII+FF+KNM
Sbjct: 857  SNEASGSDLDGDLYFVTWDENIIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNM 916

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
            V ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AVDFPKTGK+V+MP +LKPK+YP
Sbjct: 917  VQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYP 976

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            DFMGKEE QSYKS KILGKLYR+++D  + + E S  L    ++I YD  LEI GS  FI
Sbjct: 977  DFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFI 1036

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
             DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK S+KKQGELKERLKHAY+ LR
Sbjct: 1037 DDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLR 1096

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVL 1981
            K++R VFE M PDFD L D EKN  YE+KASAWYQV+YH  WV +S ELQ  D    TV+
Sbjct: 1097 KEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQIPDAVSSTVM 1156

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSFAWIAADYL RIKIR R +  + S+KPI+SLGRYLADKI
Sbjct: 1157 LSFAWIAADYLARIKIRHRGLPYSDSTKPINSLGRYLADKI 1197


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1063 bits (2748), Expect = 0.0
 Identities = 517/701 (73%), Positives = 590/701 (84%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            KGF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WMG+F+NRNVAKCAARMGQ
Sbjct: 497  KGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQ 556

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYATVEVP S+ N +L D+ERN YVFSDGIGMIS+DLA EVAEKL +  N P A+Q
Sbjct: 557  CFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQ 616

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAG KGVVACWP   +G RL LR SM+KFDSNHT LEICSWTRFQPGFLNRQIVTLLS
Sbjct: 617  IRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLS 676

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
            +L+V+D  FW MQ+ M+S LD +L D D+AFDV+T SC + GNTAA+ML+AGF+P +EPH
Sbjct: 677  SLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPH 736

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGMLSSIR SQLGDLR K+RIFV SGRWLMGCLDELG LE GQCFIQVS+PSLE+CF K
Sbjct: 737  LRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVK 796

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HG +FS  KKNL+V+ GLVVIAKNPCLHPGDVRILEAVDVP L HL+DCL+FPQKG+RPH
Sbjct: 797  HGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPH 856

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM+YEP EVK+  R V H DII+FF+KNM
Sbjct: 857  SNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNM 916

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
            V ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AVDFPKTGK+V+MP +LKPK+YP
Sbjct: 917  VQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYP 976

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            DFMGKEE QSYKS KILGKLYR+++D  + + E S  L    ++I YD  LEI GS  FI
Sbjct: 977  DFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFI 1036

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
             DAW+ KCSYDGQL GLLGQYKVN E+EVVTG+IWSMPK ++KKQGELKERLKHAY+ LR
Sbjct: 1037 DDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGYIWSMPKYNAKKQGELKERLKHAYNTLR 1096

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVL 1981
            K++R VFE M PDFD L D EKN  YE+KASAWYQV+YH  WV +S ELQ  D    TV+
Sbjct: 1097 KEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQLADAVSNTVM 1156

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSFAWIAADYL RIKIR R+++ + S+KPI+SLGRYL D I
Sbjct: 1157 LSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score = 1061 bits (2745), Expect = 0.0
 Identities = 518/701 (73%), Positives = 589/701 (84%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            +GF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WMG+F+NRNVAKCAARMGQ
Sbjct: 497  RGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQ 556

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYATVEVP S+ N +L D+ERN YVFSDGIGMIS+DLA EVAEKL +  N P A+Q
Sbjct: 557  CFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAVEVAEKLHLSVNPPSAYQ 616

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAG KGVVACWP   +G RL LR SM+KFDSNHT LEICSWTRFQPGFLNRQIVTLLS
Sbjct: 617  IRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLS 676

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
            +L+V+D  FW MQ+ M+S LD +L D D+AFDV+T SC + GNTAA+ML+AGF+P +EPH
Sbjct: 677  SLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPH 736

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGMLSSIR SQLGDLR K+RIFV SGRWLMGCLDELG LE GQCFIQVS+PSLE+CF K
Sbjct: 737  LRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIK 796

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HG +FS  KKNL+V+ GLVVIAKNPCLHPGDVRILEAVDVPGL HL+DCL+FPQKG+RPH
Sbjct: 797  HGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPH 856

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM+YEP EVK+  R V H DII+FF+KNM
Sbjct: 857  SNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQMGRQVNHMDIIDFFSKNM 916

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
            V ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AVDFPKTGK+V+MP +LKPK+YP
Sbjct: 917  VQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYP 976

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            DFMGKEE QSYKS KILGKLYR+++D  + + E S  L     +I YD  LEI GS  FI
Sbjct: 977  DFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTAFI 1036

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
             DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK S+KKQGELKERLKHAY+ LR
Sbjct: 1037 DDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLR 1096

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVL 1981
            K++R VFE M PDFD L D EKN  YE+KASAWYQV+Y+  WV +S ELQ  D    TV+
Sbjct: 1097 KEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAVSSTVM 1156

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSFAWIAADYL RIKIR R ++ + S+KPI+SLGRYL D I
Sbjct: 1157 LSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDNI 1197


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1061 bits (2745), Expect = 0.0
 Identities = 517/701 (73%), Positives = 589/701 (84%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            KGF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WMG+F+NRNVAKCAARMGQ
Sbjct: 497  KGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQ 556

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYATVEVP  + N +L D+ERN YVFSDGIGMIS+DLA EVAEKL +  N P A+Q
Sbjct: 557  CFSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQ 616

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAG KGVVACWP   +G RL LR SM+KFDSNHT LEICSWTRFQPGFLNRQIVTLLS
Sbjct: 617  IRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLS 676

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
            +L+V+D  FW MQ+ M+S LD +L D D+AFDV+T SC + GNTAA+ML+AGF+P +EPH
Sbjct: 677  SLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPH 736

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGMLSSIR SQLGDLR K+RIFV SGRWLMGCLDELG LE GQCFIQVS+PSLE+CF K
Sbjct: 737  LRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVK 796

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HG +FS  K+NL+V+ GLVVIAKNPCLHPGDVRILEAVDVP L HL+DCL+FPQKG+RPH
Sbjct: 797  HGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPH 856

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM+YEP EVK+  R V H DII+FF+KNM
Sbjct: 857  SNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNM 916

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
            V ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AVDFPKTGK+V+MP +LKPK+YP
Sbjct: 917  VQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYP 976

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            DFMGKEE QSYKS KILGKLYR+++D  + + E S  L    ++I YD  LEI GS  FI
Sbjct: 977  DFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDSTLEILGSTAFI 1036

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
             DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK S+KKQGELKERLKHAY+ LR
Sbjct: 1037 DDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLR 1096

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVL 1981
            K++R VFE M PDFD L D EKN  YE+KASAWYQV+YH  WV +S ELQ  D    TV+
Sbjct: 1097 KEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQLPDAVSNTVM 1156

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSFAWIAADYL RIKIR R+++ + S+KPI+SLGRYL D I
Sbjct: 1157 LSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1060 bits (2741), Expect = 0.0
 Identities = 517/701 (73%), Positives = 590/701 (84%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            +GF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WMG+F+NRNVAKCAARMGQ
Sbjct: 497  RGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQ 556

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYATVEVP S+ N +L D+ERN YVFSDGIGMIS+DLA EVAEKL ++ N P A+Q
Sbjct: 557  CFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAIEVAEKLHLNVNPPSAYQ 616

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAGYKGVVACWP   +G  L LR SM+KFDSNHT LEICSWTRFQPGFLNRQIVTLLS
Sbjct: 617  IRYAGYKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLS 676

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
            +L+V+D  FW MQ+ M+S LD +L D D+AFDV+T SC + GNTAA+ML+AGF+P +EPH
Sbjct: 677  SLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPH 736

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGMLSSIR SQLGDLR K+RIFV SGRWLMGCLDELG LE GQCFIQVS+PSLE+CF K
Sbjct: 737  LRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVK 796

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HG +FS  KKNL+V+ GLVVIAKNPCLHPGDVRILEAVDVP L HL+DCL+FPQKG+RPH
Sbjct: 797  HGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPH 856

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM+YEP EVK+  R V H DII+FF+KNM
Sbjct: 857  SNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNM 916

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
            V ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AVDFPKTGK+V+MP +LKPK+YP
Sbjct: 917  VQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYP 976

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            DFMGKEE QSYKS KILGKLYR+++D  + + E S  L    ++I YD  L I GS  FI
Sbjct: 977  DFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPKDIPYDTTLVIPGSTVFI 1036

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
             DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK S+KKQGELKERLKHAY+ LR
Sbjct: 1037 DDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLR 1096

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVL 1981
            K++R VFE M PDFD L D EKN  YE+KASAWYQV+Y+  WV +S ELQ  D    TV+
Sbjct: 1097 KEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAISSTVM 1156

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSFAWIAADYL RIKIR R ++ + S+KPI+SLGRYL DKI
Sbjct: 1157 LSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score = 1059 bits (2739), Expect = 0.0
 Identities = 515/701 (73%), Positives = 588/701 (83%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            KGFYLCGR+YSFLAFS+NQLRDRSAWFFAE     V SI NWMGKF NRNVAKCAARMGQ
Sbjct: 497  KGFYLCGRRYSFLAFSANQLRDRSAWFFAETPEIRVTSIINWMGKFGNRNVAKCAARMGQ 556

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYATVEV PS+ N +L D+ERN YVFSDGIGM+++DL+ EVA KLQ+  N PCA+Q
Sbjct: 557  CFSSTYATVEVLPSEVNSELPDIERNGYVFSDGIGMMTADLSIEVAAKLQLSVNPPCAYQ 616

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAG KGVVACWPA K+G RL LR SM+KFDSNHT LEICSWTR QPGFLNRQI+TLLS
Sbjct: 617  IRYAGCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTILEICSWTRLQPGFLNRQIITLLS 676

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
            +LEV+D+ FW MQ+ M+S+LD IL D D+AFDV+T SC + GNTAA+ML+AGF+P +EPH
Sbjct: 677  SLEVKDEMFWEMQKEMLSKLDKILVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPH 736

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGML+SIR +QLGDLR K+R+FV SGRWLMGCLDELG LE GQCFIQVS+PSLE CF K
Sbjct: 737  LRGMLASIRAAQLGDLRNKTRMFVTSGRWLMGCLDELGELEQGQCFIQVSSPSLETCFVK 796

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HG EFS+ KKNL+V+ GLVVIAKNPCLHPGDVRILEAVDVPGL HL+DCL+FPQKG+RPH
Sbjct: 797  HGPEFSEIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPH 856

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM Y P E K+  R V H+DII+FF KNM
Sbjct: 857  SNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMAYAPAEAKQLGRQVQHTDIIDFFLKNM 916

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
            V ESLG ICNAHVVHAD S++GA+DEKC+KLAELAA+AVDFPKTGK+V+MP +LKPK+YP
Sbjct: 917  VQESLGEICNAHVVHADLSEFGAMDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYP 976

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            DFMGKE  QSY+S KILGKLYR++ D Y+ +   S  L Y  ++I YD  LEI G  DFI
Sbjct: 977  DFMGKEPFQSYESKKILGKLYRQVIDVYDAEGGESSGLEYVPKDIPYDTNLEIPGYEDFI 1036

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
             DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK S+KKQGELKERLKHAY+ LR
Sbjct: 1037 DDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPKYSAKKQGELKERLKHAYNMLR 1096

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVL 1981
            K++R VFE M PDFD L   EKN  YE+KA AWY+V+YH  WV +S ELQ  D     V+
Sbjct: 1097 KEFRNVFEQMEPDFDLLPIDEKNDMYERKAFAWYRVTYHPHWVTRSLELQLPDAVSNGVM 1156

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSFAWIAADY+ RIKIRQR M+N  S+KPIDSLGRYL +KI
Sbjct: 1157 LSFAWIAADYIARIKIRQRGMQNFDSTKPIDSLGRYLVNKI 1197


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score = 1058 bits (2735), Expect = 0.0
 Identities = 515/701 (73%), Positives = 588/701 (83%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            +GF+LCGRKYSFLAFS+NQLRDRSAWFFAED    V  I +WMG+F+NRNVAKCAARMGQ
Sbjct: 497  RGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQ 556

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYATVEVP S+ N +L D+ERN YVFSDGIGMIS+DLA EVAEKL +  N P A+Q
Sbjct: 557  CFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLALEVAEKLHLSVNPPSAYQ 616

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAG KGVVACWP   +G  L LR SM+KFDSNHT LEICSWTRFQPGFLNRQIVTLLS
Sbjct: 617  IRYAGCKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLS 676

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
            +L+V+D  FW MQ+ M+S L+ +L D D+AFDV+T SC + GNTAA+ML+AGF+P +EPH
Sbjct: 677  SLDVKDGIFWEMQKEMISGLNKMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPH 736

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGMLSSIR SQLGDLR K+RIFV SGRWLMGCLDELG LE GQCFIQVS+PSLE+CF K
Sbjct: 737  LRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIK 796

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HG +FS  KKNL+V+ GLVVIAKNPCLHPGDVRILEAVDVPGL HL+DCL+FPQKG+RPH
Sbjct: 797  HGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPH 856

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM+YEP EVK+  R V H DII+FF+KNM
Sbjct: 857  SNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNM 916

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
            V ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AVDFPKTGK+V+MP +LKPK+YP
Sbjct: 917  VQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYP 976

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            DFMGKEE QSYKS KILGKLYR+++D  + + E S  L     +I YD  LEI GS  F+
Sbjct: 977  DFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPNDIPYDSSLEIPGSTVFM 1036

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
             DAW+CKCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK S+KKQGELKERLKHAY+ LR
Sbjct: 1037 GDAWNCKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNMLR 1096

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVL 1981
            K++R VFE M PDFD L D EKN  YE+KASAWYQV+Y+  WV +S ELQ  D    TV+
Sbjct: 1097 KEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAVSSTVM 1156

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSFAWIAADYL RI IR R ++ + S+KPI+SLGRYL D I
Sbjct: 1157 LSFAWIAADYLARINIRHRGLQYSDSTKPINSLGRYLVDNI 1197


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score = 1056 bits (2731), Expect = 0.0
 Identities = 512/701 (73%), Positives = 590/701 (84%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            KGFYLCGR+YSFLAFS+NQLRDRSAWFFAE     V +I NWMGKF NRNVAKCAARMGQ
Sbjct: 498  KGFYLCGRRYSFLAFSANQLRDRSAWFFAEAPEIRVPNIINWMGKFGNRNVAKCAARMGQ 557

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYATVEV PS+ N +L D+ERN YVFSDGIGM+S+DL+ EVA KLQ+  N PCA+Q
Sbjct: 558  CFSSTYATVEVLPSEVNSELPDIERNGYVFSDGIGMMSADLSIEVAAKLQLSVNPPCAYQ 617

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAG KGVVACWPA K+G RL LR SM+KFDSNHT LEICSWTR QPGFLNRQI+TLLS
Sbjct: 618  IRYAGCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTILEICSWTRLQPGFLNRQIITLLS 677

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
            +LEV+D+ FW MQ+ M+S+LD IL D D+AFDV+T SC + GNTAA+ML+AGF+P +EPH
Sbjct: 678  SLEVKDEMFWEMQKEMLSKLDKILVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPH 737

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGML+SIR +QLGDLR K+R+FV SGRWLMGCLDEL  LE GQCFIQVS+PSLE CF K
Sbjct: 738  LRGMLASIRAAQLGDLRNKTRMFVPSGRWLMGCLDELRKLEQGQCFIQVSSPSLETCFVK 797

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HG +FS+ KKNL+VI GLVVIAKNPCLHPGDVRILEAVDVPGL HL+DCL+FPQKG+RPH
Sbjct: 798  HGPKFSEIKKNLQVIKGLVVIAKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPH 857

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWD+NLIPPSKKSW PMDY P E K+  R V H+DII+FF+KNM
Sbjct: 858  SNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMDYAPAEAKQLGRQVQHTDIIDFFSKNM 917

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
            V ESLG ICNAHVVHAD S++GALDEKC+KLAELAA+AVDFPKTGK+V+MP +LKPK+YP
Sbjct: 918  VQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYP 977

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            DFMGKE  Q+Y+S KILGKLYR++ D Y+ +   S  L +  ++I YD  +EI G  DFI
Sbjct: 978  DFMGKEPFQTYESKKILGKLYRQVIDVYDAEGGESSGLEFVPKDIPYDTNIEILGYEDFI 1037

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
             DAW+ KCSYDGQL GLLGQYKVN E+EVVTGHIWSMPK S+KKQGELKERLKHAY+ LR
Sbjct: 1038 DDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLR 1097

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVL 1981
            K++R VFE M PDFD L   EKN  YE+KASAWY+V+YH  WV +S ELQ  D     V+
Sbjct: 1098 KEFRNVFEQMEPDFDMLPVDEKNDMYERKASAWYRVTYHPHWVTRSLELQLPDAVSNGVM 1157

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSFAWIAADY+ RIKIRQR M+N+ S+KPI+ LGRYL +KI
Sbjct: 1158 LSFAWIAADYIARIKIRQRGMQNSDSTKPINFLGRYLVNKI 1198


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score = 1046 bits (2706), Expect = 0.0
 Identities = 503/706 (71%), Positives = 583/706 (82%), Gaps = 6/706 (0%)
 Frame = +2

Query: 5    GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQC 184
            GFYLCGRKYSFLAFSSNQLRDRSAWFFAED  T+V  I+NWMGKFTNRN+AKCAARMGQC
Sbjct: 498  GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKTSVSKIRNWMGKFTNRNIAKCAARMGQC 557

Query: 185  FSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQI 364
            FSSTYATVEVP ++A   L D+ERNNY+FSDGIGMI+ DLAKEVAEKL++  N PCA+QI
Sbjct: 558  FSSTYATVEVPSAEAILDLPDIERNNYIFSDGIGMITPDLAKEVAEKLKLEVNPPCAYQI 617

Query: 365  RYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLSA 544
            RYAG KGVVACWPA  +G RL LR SM KF SNHTTLEICSWTRFQPGFLNRQI+TLLS 
Sbjct: 618  RYAGCKGVVACWPAHIDGIRLSLRVSMNKFHSNHTTLEICSWTRFQPGFLNRQIITLLST 677

Query: 545  LEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPHL 724
            L+V D+ FW+MQ +MVS+L+ +  D D+AFDV+T SC + GNTAA+ML+AGF P  EPHL
Sbjct: 678  LDVPDEIFWKMQIVMVSKLNQMFMDADVAFDVVTASCAEQGNTAAIMLSAGFNPKTEPHL 737

Query: 725  RGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAKH 904
             GML+ IR +QL  LREK+RIFV SGRWLMGCLDELGVLE+GQCFIQVS PSLE CF KH
Sbjct: 738  CGMLTCIRAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEHGQCFIQVSNPSLESCFWKH 797

Query: 905  GSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPHP 1084
            GS FS++KK L+V+ G VV+AKNPCLHPGD+RILEAVD P L HLHDCL+FPQKG+RPH 
Sbjct: 798  GSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILEAVDAPELHHLHDCLVFPQKGDRPHT 857

Query: 1085 NEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNMV 1264
            NEASGSDLDGDLYFVTWD+NLIPPSK+SW PM Y+  E K+  R V H DII+FF KNMV
Sbjct: 858  NEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQLNRPVNHQDIIDFFAKNMV 917

Query: 1265 NESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYPD 1444
            NE+LG ICNAHVVHAD S+YGALDE CIKLAELAA AVDFPKTGK+V+MPP LKPKLYPD
Sbjct: 918  NENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMPPHLKPKLYPD 977

Query: 1445 FMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSE------NIFYDRELEITG 1606
            FMGKE+ QSY S KILG+LYR+++D YN D +        SE      +I YD++LE++G
Sbjct: 978  FMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSELNLVRGDIPYDKDLEVSG 1037

Query: 1607 SRDFIADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHA 1786
            S D+I DAW  KCSYDGQL GLL QYKV  E+EVVTGHIWSMPK +S+KQGELKERLK +
Sbjct: 1038 SSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQGELKERLKQS 1097

Query: 1787 YSALRKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDP 1966
            Y +L+K++R+VFE M  DF+QL++ EKN+ YEQKASAWYQV+YH  WV KS ELQ+ D  
Sbjct: 1098 YHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNKSMELQEPDAA 1157

Query: 1967 GKTVLLSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            G   +LSFAWIAADYL RIKIR R  +   +SKP++SL +YLAD+I
Sbjct: 1158 GCASMLSFAWIAADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score = 1044 bits (2699), Expect = 0.0
 Identities = 498/702 (70%), Positives = 586/702 (83%), Gaps = 1/702 (0%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            +GFYLCGR+YSFLAFSSNQLRDRSAWFFAED++  V +IK+WMGKFTN+N+AKCAARMGQ
Sbjct: 497  EGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMGKFTNKNIAKCAARMGQ 556

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYAT+EVPP + N  L D++RN Y FSDGIGMI+ DLA+EVAEKL+   + PCA+Q
Sbjct: 557  CFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLAREVAEKLKFDFDPPCAYQ 616

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAG KGVVACWP   +G RL LR+SM KF SNHT LEICSWTRFQPGFLNRQI+TLLS
Sbjct: 617  IRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEICSWTRFQPGFLNRQIITLLS 676

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
            AL V D  FW+MQELMVS+L+ +L D D+AFDVLT SC + GN AA+ML+AGF+P  EPH
Sbjct: 677  ALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAEQGNVAAIMLSAGFKPQKEPH 736

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGML+ +R +QL  LREK+RIFV SGRWLMGCLDELGVLE GQCFIQVS   LE+CF K
Sbjct: 737  LRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQCFIQVSNSYLENCFVK 796

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HGS+FS+TKKNL+V+ G VVIAKNPCLHPGD+RILEAVD PGL HL+DCL+FPQKGERPH
Sbjct: 797  HGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGERPH 856

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWD+NLIPPSK+SW PM Y+  E K+  R V H DI+EFF KNM
Sbjct: 857  ANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQDIVEFFAKNM 916

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
             NE+LG ICNAHVV AD S+YGALDEKC+ LAELAA AVDFPKTGKIVSMP +LKPK+YP
Sbjct: 917  ANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSDLKPKIYP 976

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAY-NQDYEPSPQLTYPSENIFYDRELEITGSRDF 1618
            DFMGKEE QSYKS KILG+LYR+I+DAY + D   S +L +   +I YD +LE+ G+ DF
Sbjct: 977  DFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSELNFVRGDIPYDLDLEVLGATDF 1036

Query: 1619 IADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSAL 1798
            I+DAW  KCSYDGQL GLL QYKV  E+EVVTGH+WSMPK SS+KQG+LKERLKH+Y+ L
Sbjct: 1037 ISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDLKERLKHSYNCL 1096

Query: 1799 RKDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTV 1978
            ++++R+VFE M  DF QL D EKN+ YE+KASAWYQV+YH  W++KS ELQ  D  G +V
Sbjct: 1097 KREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHWIQKSLELQDSDGAGISV 1156

Query: 1979 LLSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            +LSFAWIAADYL RIKIR  ++ N  S+KP++SL +YLAD++
Sbjct: 1157 MLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score = 1043 bits (2696), Expect = 0.0
 Identities = 494/701 (70%), Positives = 585/701 (83%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            +GFYLCGR+YSFLAFS+NQLRD+SAWFF+E+++ +V  +K+WMGKFTNRN+AKCAARMGQ
Sbjct: 500  EGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKSWMGKFTNRNIAKCAARMGQ 559

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYAT+EVPP + N  L D+ERN YVFSDGIG+I+ DLA+EVAEKL++  + PCA+Q
Sbjct: 560  CFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDPPCAYQ 619

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAG KGVVACWP   +G RL LR SM KF SNHTTLEICSWTRFQPGFLNRQI+TLLS
Sbjct: 620  IRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLS 679

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
             L V D  FW+MQE MVS+L+ +  + D+AFDVLT SC D GN AA+ML+AGF+P  EPH
Sbjct: 680  TLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQGNVAAIMLSAGFKPDREPH 739

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGML+ +R +QL DLREK+RIFV SGRWLMGCLDELG+LE GQCFIQVS  SLE CF K
Sbjct: 740  LRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLEQGQCFIQVSNSSLEKCFMK 799

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HG++FS+ +KNL+VI G VVIAKNPCLHPGDVR+LEAVDVPGL HL+DCL+FPQKGERPH
Sbjct: 800  HGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQKGERPH 859

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWD+NLIPPSK+SW PM Y+  E K   R V H DIIEFF KNM
Sbjct: 860  TNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLLARPVNHQDIIEFFAKNM 919

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
            VN++LG ICNAHVVHAD S+YGA D+ C+ LAELAA AVDFPKTGK+VSMPP LKPK+YP
Sbjct: 920  VNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPKTGKVVSMPPYLKPKMYP 979

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            DFMGKEE QSYKS KILG+LYR+I+DAY++D   S +L     +I YD +LE+ G+ D+I
Sbjct: 980  DFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPGDIPYDSDLEVVGASDYI 1039

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
            +DAW  KCSYDGQL GLL QYKV  E+EVVTGHIWSMPK SS+KQGELK+RLKH+Y++L+
Sbjct: 1040 SDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGELKDRLKHSYNSLK 1099

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVL 1981
            K++R++FE M  +F+QL D EKN  YEQKASAWYQV YH  WV+KS ELQ  D  G +V+
Sbjct: 1100 KEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQDPDGAGTSVM 1159

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSFAWIAADYL RIKIR R+  N  S+KP++SL +YLAD++
Sbjct: 1160 LSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score = 1040 bits (2689), Expect = 0.0
 Identities = 503/700 (71%), Positives = 575/700 (82%)
 Frame = +2

Query: 5    GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQC 184
            GFYLCGRKYSFLAFS+NQLRD SAWFFAED  T+V  I  WMGKFTNRN+AKCAARMGQC
Sbjct: 498  GFYLCGRKYSFLAFSANQLRDSSAWFFAEDGKTSVLQILRWMGKFTNRNIAKCAARMGQC 557

Query: 185  FSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQI 364
            FSSTYATVEVP ++ N  L D+ERN YVFSDGIG I+ DLAKEVA+KL++  N PCA+QI
Sbjct: 558  FSSTYATVEVPSTEVNPFLPDIERNGYVFSDGIGKITPDLAKEVAQKLKLDLNPPCAYQI 617

Query: 365  RYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLSA 544
            RYAG KGVVACWP   +G RL LR SM KF S+HTTLEICSWTRFQPGFLNRQI+TLLS 
Sbjct: 618  RYAGCKGVVACWPEEGDGVRLSLRCSMNKFFSDHTTLEICSWTRFQPGFLNRQIITLLST 677

Query: 545  LEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPHL 724
              V D+ FW MQ  MVS+L+ IL D D+AF+VLT SC++ GN AA+ML+AGF+P  EPHL
Sbjct: 678  QYVPDEVFWEMQNTMVSKLNKILVDTDVAFEVLTSSCSEQGNAAAIMLSAGFKPQTEPHL 737

Query: 725  RGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAKH 904
            RG+L+ +R SQL  LREK+RIFV SGRWLMG LDELGVLE GQCFIQVS PS+E+CF KH
Sbjct: 738  RGILTCVRASQLCGLREKARIFVPSGRWLMGVLDELGVLEQGQCFIQVSNPSVENCFLKH 797

Query: 905  GSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPHP 1084
            GS F++TKKN EVI GLVVIAKNPCLHPGD+RILEAVD PGL HL+DCL+FPQKGERPH 
Sbjct: 798  GSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGERPHT 857

Query: 1085 NEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNMV 1264
            NEASGSDLDGDLYFVTW+D LIPP KKSWPPM Y+PGE KE  R V H DII+FF KNMV
Sbjct: 858  NEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPGETKEIQREVNHKDIIDFFAKNMV 917

Query: 1265 NESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYPD 1444
            NE LGTICNAHVVHAD S+YGALDEKCI LAELAA AVDFPKTGKIVSMP  LKPKLYPD
Sbjct: 918  NEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVDFPKTGKIVSMPANLKPKLYPD 977

Query: 1445 FMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFIA 1624
            FMGKEE QSYKS KILG+LYR I+D Y++D   S ++   S +I YD +LE+TGS D+I 
Sbjct: 978  FMGKEEYQSYKSRKILGRLYRHIKDVYDEDLSESSEINLDSPDINYDTDLEVTGSADYID 1037

Query: 1625 DAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALRK 1804
            DAW  KCSYD QL+GLLGQYKV  E+EVVTGHIWSMPK +S+K G+LKE+L H+Y ALRK
Sbjct: 1038 DAWVKKCSYDRQLIGLLGQYKVKREEEVVTGHIWSMPKYTSRKLGDLKEKLGHSYGALRK 1097

Query: 1805 DYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVLL 1984
            ++R++FE M  + +QL++ E+N  YE+KASAWYQV+YH  WVEK  ELQK D     V+L
Sbjct: 1098 EFRQIFESMDSEIEQLNEDERNELYERKASAWYQVTYHPKWVEKKLELQKSDGADPVVML 1157

Query: 1985 SFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            SFAWIAADYL RIKIR +   N   SKP++SL +YLADKI
Sbjct: 1158 SFAWIAADYLARIKIRSQGTGNVDFSKPVNSLVKYLADKI 1197


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score = 1039 bits (2686), Expect = 0.0
 Identities = 496/701 (70%), Positives = 589/701 (84%), Gaps = 1/701 (0%)
 Frame = +2

Query: 5    GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQC 184
            GFYLCG++YSFLAFSSNQLRDRSAWFFAED   TV+ IK WMG+F NRN+AKCAARMGQC
Sbjct: 494  GFYLCGQRYSFLAFSSNQLRDRSAWFFAEDGKITVNGIKKWMGRFNNRNIAKCAARMGQC 553

Query: 185  FSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQI 364
            FSSTYATVEVP ++ N  L+++ERN YVFSDGIGMI+ DLAKEVAEKL++  N P A+QI
Sbjct: 554  FSSTYATVEVPLTEVNFDLEEIERNTYVFSDGIGMITPDLAKEVAEKLKLDINPPSAYQI 613

Query: 365  RYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLSA 544
            RYAG KGVVACWP   +G RL LR SM KFDS HT LEICSWTRFQPGFLNRQIVTLLS 
Sbjct: 614  RYAGCKGVVACWPPKGDGIRLSLRRSMNKFDSKHTILEICSWTRFQPGFLNRQIVTLLST 673

Query: 545  LEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPHL 724
            L V D+ FW+MQE M+ +L+ +L D D+AF+VLT SC + GN  A+ML+AGF+P +EPHL
Sbjct: 674  LNVRDEIFWKMQETMLFKLNQMLTDADVAFNVLTASCPEQGNVGAIMLSAGFKPQSEPHL 733

Query: 725  RGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAKH 904
            +GML+ IR +QL  LREK+RIFV  GRWLMGCLDELGVLE GQCFIQVSTPSLE+CF+KH
Sbjct: 734  QGMLTCIRAAQLWGLREKARIFVPLGRWLMGCLDELGVLEQGQCFIQVSTPSLENCFSKH 793

Query: 905  GSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPHP 1084
            GS FS+TK NLEVI G VVIAKNPCLHPGD+RILEAVDVPGL HL+DCL+FPQKG+RPH 
Sbjct: 794  GSRFSETKNNLEVIKGFVVIAKNPCLHPGDIRILEAVDVPGLHHLYDCLVFPQKGDRPHA 853

Query: 1085 NEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNMV 1264
            NEASGSDLDGDLYFVTWD+NLIPPSKKSW PM Y+P + +  PR VT  DII+FF++NMV
Sbjct: 854  NEASGSDLDGDLYFVTWDENLIPPSKKSWNPMQYDPAKPRTLPRDVTQKDIIDFFSRNMV 913

Query: 1265 NESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYPD 1444
            NESLG ICNAHVVHAD S YGALDEKC+ LAELAAIAVDFPKTG IV+MP  LKPK+YPD
Sbjct: 914  NESLGAICNAHVVHADLSDYGALDEKCLSLAELAAIAVDFPKTGIIVTMPAHLKPKIYPD 973

Query: 1445 FMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFIA 1624
            FMGKEE QSYKSTKI+G+LYR+I+D Y+ D  PS +L   S NI +D +LE+ G+ DF+ 
Sbjct: 974  FMGKEEYQSYKSTKIMGRLYRQIKDEYSDDVSPSSELNIVSSNIPFDTDLEVPGAADFLD 1033

Query: 1625 DAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALRK 1804
            DAW  KCSYDGQL GL+ QYKV  E+EVVTG IWSMPK +S+K+G+LKERLKH+Y+ LRK
Sbjct: 1034 DAWEKKCSYDGQLKGLMIQYKVKREEEVVTGQIWSMPKHNSRKEGDLKERLKHSYTGLRK 1093

Query: 1805 DYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKEL-QKVDDPGKTVL 1981
            ++R+VFE +  DF+QL+D EKNV YE++ASAWYQ++YH  WV+KS+++  ++++    V+
Sbjct: 1094 EFRQVFEKVDSDFEQLTDDEKNVLYEKRASAWYQITYHPKWVKKSQDMHDQLEEVKNVVM 1153

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSFAWIAADYL RIKIR R + +A S+KPI+SLG+YLAD+I
Sbjct: 1154 LSFAWIAADYLARIKIRCRGVGDADSTKPINSLGKYLADRI 1194


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score = 1038 bits (2683), Expect = 0.0
 Identities = 492/700 (70%), Positives = 579/700 (82%)
 Frame = +2

Query: 5    GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQC 184
            GF+LCGRKYSFLAFSSNQLRDRSAWFFAEDK+ ++  IKNWMG+FTNRNVAKCAARMGQC
Sbjct: 498  GFHLCGRKYSFLAFSSNQLRDRSAWFFAEDKTISIQGIKNWMGRFTNRNVAKCAARMGQC 557

Query: 185  FSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQI 364
            FSSTYATVEVP +Q NH+L D+ERN YVFSDGIG I+ DLA EVAEKL++  + P A+QI
Sbjct: 558  FSSTYATVEVPSTQVNHELPDIERNGYVFSDGIGRITPDLAMEVAEKLKLDRDPPSAYQI 617

Query: 365  RYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLSA 544
            RY G KGVVACWP+  +G RL LR SM KF S+HTTLEICSWTR QPGFLNRQI+TLLSA
Sbjct: 618  RYGGCKGVVACWPSTGDGFRLSLRRSMNKFASDHTTLEICSWTRLQPGFLNRQIITLLSA 677

Query: 545  LEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPHL 724
            L V D+ FW MQE MVS+L  +L D D+AFDVLT SC + GN+AA+ML+AGF+P  EPHL
Sbjct: 678  LNVPDEIFWTMQETMVSKLKQMLVDTDVAFDVLTASCAEQGNSAAIMLSAGFKPQTEPHL 737

Query: 725  RGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAKH 904
            RGML+ I+ +QL  LREK+RIFV SGRWLMGCLDELGVLE GQCF+QVSTPSLE+CFAKH
Sbjct: 738  RGMLTCIQAAQLWGLREKTRIFVPSGRWLMGCLDELGVLEQGQCFVQVSTPSLENCFAKH 797

Query: 905  GSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPHP 1084
            GS F +T KNL+VI G VV+AKNPCLHPGD+RILEAVD PGL HLHDCL+FPQKG RPH 
Sbjct: 798  GSRFDQTDKNLQVIKGFVVVAKNPCLHPGDIRILEAVDAPGLHHLHDCLVFPQKGHRPHT 857

Query: 1085 NEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNMV 1264
            +EASGSDLDGDLYFVTWD+NLIPP KKSW PM+YEP E K   R VT  D+IEFF +NMV
Sbjct: 858  DEASGSDLDGDLYFVTWDENLIPPRKKSWQPMEYEPAEAKLSGRSVTSQDLIEFFVRNMV 917

Query: 1265 NESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYPD 1444
            NE+LG ICNAHVVH+D S+YGA DE C+KLAELAA+AVDFPKTGKIV+MPP LKPKLYPD
Sbjct: 918  NENLGAICNAHVVHSDRSEYGAFDENCLKLAELAAVAVDFPKTGKIVTMPPHLKPKLYPD 977

Query: 1445 FMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFIA 1624
            FMGK++ QSYKS KILG+LYR+I DAY++D   S +  +   ++ YD +LE+  + DFIA
Sbjct: 978  FMGKQDYQSYKSNKILGRLYRKICDAYDEDVANSSEQNHVPSDVKYDMDLEVPKAADFIA 1037

Query: 1625 DAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALRK 1804
            DAW  KCSYD QL GL+ QYK+  E+E+VTGH+WSMPK +S+KQGEL+ERLKH+YSAL+K
Sbjct: 1038 DAWERKCSYDSQLRGLMTQYKIMREEEIVTGHVWSMPKYTSRKQGELQERLKHSYSALKK 1097

Query: 1805 DYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVLL 1984
            ++R+ FE M   F+ L D +KN  YEQKASAWYQV+YH  WV+KS +L   D PG  V+L
Sbjct: 1098 EFRQFFEKMDTGFESLIDDQKNSFYEQKASAWYQVTYHPDWVKKSLDLHGPDGPGDVVML 1157

Query: 1985 SFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            SFAWIAADYL RIKI++R++ N    KPI+ L +YLAD+I
Sbjct: 1158 SFAWIAADYLARIKIKRREVSNIDPKKPINILTKYLADRI 1197


>ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer
            arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X3 [Cicer
            arietinum]
          Length = 1201

 Score = 1029 bits (2661), Expect = 0.0
 Identities = 503/708 (71%), Positives = 584/708 (82%), Gaps = 7/708 (0%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            +GFY CGRKYSFLAFSSNQLRDRSAWFFAED + T D I+NWMGKF  RNVAKCAARMGQ
Sbjct: 497  EGFYFCGRKYSFLAFSSNQLRDRSAWFFAEDNNITCDDIRNWMGKFNQRNVAKCAARMGQ 556

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYA+VEV  ++ N  L DVERNNYVFSDGIG+I++DLA EVAEKL++   +P A+Q
Sbjct: 557  CFSSTYASVEVAANEVNSMLADVERNNYVFSDGIGIITNDLAVEVAEKLKLD-KVPSAYQ 615

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAG+KGVVACWP   +G RL LR SM KF S HTTLEIC+WTRFQPGFLNRQI+TLLS
Sbjct: 616  IRYAGFKGVVACWPPKGDGIRLSLRPSMNKFQSTHTTLEICAWTRFQPGFLNRQIITLLS 675

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
            AL+V D  FW MQE+M+SRL+ +L D D+AFDVLT SC +HGN AA+ML+ GF P  EPH
Sbjct: 676  ALDVSDGIFWDMQEVMISRLNQMLVDADVAFDVLTKSCAEHGNAAAIMLSCGFSPKTEPH 735

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGML+SIR +QL  LREKSRIFV SGRWLMG LDELGVLE GQCF+QVSTPSLE+CF+K
Sbjct: 736  LRGMLNSIRAAQLWGLREKSRIFVSSGRWLMGVLDELGVLEQGQCFVQVSTPSLENCFSK 795

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HGS FS+TK  L+V+ GLVVIAKNPCLHPGDVR+LEAVDVP L HL+DCL+FPQKGERPH
Sbjct: 796  HGSRFSETK-TLQVVKGLVVIAKNPCLHPGDVRVLEAVDVPDLHHLYDCLVFPQKGERPH 854

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWD NLIPPSK+SW PM+Y   E K   R VT  DII+FF KNM
Sbjct: 855  TNEASGSDLDGDLYFVTWDGNLIPPSKRSWTPMEYAAQESKLHTRQVTIRDIIDFFVKNM 914

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
            VNE LG+ICNAHVVHAD S YGALDEKCI LAELAA AVDFPKTGK+V+MPP LKPKLYP
Sbjct: 915  VNEHLGSICNAHVVHADCSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYP 974

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            DFMGKE  QSYKS KILG+LYR+I+DAY++D + +P L   S +I YD +LE+ GS DFI
Sbjct: 975  DFMGKEHHQSYKSKKILGRLYRQIKDAYDKDID-APDLNCASSDIHYDTDLEVPGSADFI 1033

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
            +DAW  KCSYDGQL GLLGQYKV +E+EVVTG IWSMPK +S+KQGELKERLKH+YSAL+
Sbjct: 1034 SDAWYQKCSYDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALK 1093

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKEL-------QKVD 1960
            K++R+ FE +  D  +LSD EKN+ YEQKASAWYQV+YH  WV++S +L       Q+ D
Sbjct: 1094 KEFRQTFEKLNLDIGELSDEEKNLLYEQKASAWYQVAYHPKWVKRSHDLKVKSSDNQEAD 1153

Query: 1961 DPGKTVLLSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
              G  V+LSF WIA DYL R KIR+R++EN  S KP+DSL +YL++++
Sbjct: 1154 SLGNMVMLSFPWIAVDYLARTKIRRRRVENFDSVKPVDSLAKYLSERL 1201


>ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Cicer
            arietinum]
          Length = 1247

 Score = 1029 bits (2661), Expect = 0.0
 Identities = 503/708 (71%), Positives = 584/708 (82%), Gaps = 7/708 (0%)
 Frame = +2

Query: 2    KGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQ 181
            +GFY CGRKYSFLAFSSNQLRDRSAWFFAED + T D I+NWMGKF  RNVAKCAARMGQ
Sbjct: 543  EGFYFCGRKYSFLAFSSNQLRDRSAWFFAEDNNITCDDIRNWMGKFNQRNVAKCAARMGQ 602

Query: 182  CFSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQ 361
            CFSSTYA+VEV  ++ N  L DVERNNYVFSDGIG+I++DLA EVAEKL++   +P A+Q
Sbjct: 603  CFSSTYASVEVAANEVNSMLADVERNNYVFSDGIGIITNDLAVEVAEKLKLD-KVPSAYQ 661

Query: 362  IRYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLS 541
            IRYAG+KGVVACWP   +G RL LR SM KF S HTTLEIC+WTRFQPGFLNRQI+TLLS
Sbjct: 662  IRYAGFKGVVACWPPKGDGIRLSLRPSMNKFQSTHTTLEICAWTRFQPGFLNRQIITLLS 721

Query: 542  ALEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPH 721
            AL+V D  FW MQE+M+SRL+ +L D D+AFDVLT SC +HGN AA+ML+ GF P  EPH
Sbjct: 722  ALDVSDGIFWDMQEVMISRLNQMLVDADVAFDVLTKSCAEHGNAAAIMLSCGFSPKTEPH 781

Query: 722  LRGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAK 901
            LRGML+SIR +QL  LREKSRIFV SGRWLMG LDELGVLE GQCF+QVSTPSLE+CF+K
Sbjct: 782  LRGMLNSIRAAQLWGLREKSRIFVSSGRWLMGVLDELGVLEQGQCFVQVSTPSLENCFSK 841

Query: 902  HGSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPH 1081
            HGS FS+TK  L+V+ GLVVIAKNPCLHPGDVR+LEAVDVP L HL+DCL+FPQKGERPH
Sbjct: 842  HGSRFSETK-TLQVVKGLVVIAKNPCLHPGDVRVLEAVDVPDLHHLYDCLVFPQKGERPH 900

Query: 1082 PNEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNM 1261
             NEASGSDLDGDLYFVTWD NLIPPSK+SW PM+Y   E K   R VT  DII+FF KNM
Sbjct: 901  TNEASGSDLDGDLYFVTWDGNLIPPSKRSWTPMEYAAQESKLHTRQVTIRDIIDFFVKNM 960

Query: 1262 VNESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYP 1441
            VNE LG+ICNAHVVHAD S YGALDEKCI LAELAA AVDFPKTGK+V+MPP LKPKLYP
Sbjct: 961  VNEHLGSICNAHVVHADCSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYP 1020

Query: 1442 DFMGKEELQSYKSTKILGKLYRRIRDAYNQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            DFMGKE  QSYKS KILG+LYR+I+DAY++D + +P L   S +I YD +LE+ GS DFI
Sbjct: 1021 DFMGKEHHQSYKSKKILGRLYRQIKDAYDKDID-APDLNCASSDIHYDTDLEVPGSADFI 1079

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
            +DAW  KCSYDGQL GLLGQYKV +E+EVVTG IWSMPK +S+KQGELKERLKH+YSAL+
Sbjct: 1080 SDAWYQKCSYDGQLSGLLGQYKVKTEEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALK 1139

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKEL-------QKVD 1960
            K++R+ FE +  D  +LSD EKN+ YEQKASAWYQV+YH  WV++S +L       Q+ D
Sbjct: 1140 KEFRQTFEKLNLDIGELSDEEKNLLYEQKASAWYQVAYHPKWVKRSHDLKVKSSDNQEAD 1199

Query: 1961 DPGKTVLLSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
              G  V+LSF WIA DYL R KIR+R++EN  S KP+DSL +YL++++
Sbjct: 1200 SLGNMVMLSFPWIAVDYLARTKIRRRRVENFDSVKPVDSLAKYLSERL 1247


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score = 1027 bits (2655), Expect = 0.0
 Identities = 491/701 (70%), Positives = 579/701 (82%), Gaps = 1/701 (0%)
 Frame = +2

Query: 5    GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQC 184
            GF+LCGRKYSFLA+SSNQLRD+SAWFFAE KS +VD+I  WMGKFTN+NVAKCAAR+GQC
Sbjct: 497  GFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTNKNVAKCAARIGQC 556

Query: 185  FSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQI 364
            FSSTYAT+EVP +  NH L DVERN YVFSDGIG I+ DLA+EVA+KL+M  + PCA+QI
Sbjct: 557  FSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVADKLKMDGSPPCAYQI 616

Query: 365  RYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLSA 544
            RYAGYKGVVA WP+ K+G RL LR SM KF+SNH  LEICSWTRFQPGFLNRQI+TLLS 
Sbjct: 617  RYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFLNRQIITLLST 676

Query: 545  LEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPHL 724
            L V D+ FW MQE M+S+LD ++ D D+AF+VLT SC + GN AA+ML+AGF P  EPHL
Sbjct: 677  LSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIMLSAGFEPRTEPHL 736

Query: 725  RGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAKH 904
            RGML  IR +QL  LREK+RIFV  GRW MGC DE GVL+ GQCFIQVSTP LE CF+KH
Sbjct: 737  RGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVSTPLLEKCFSKH 796

Query: 905  GSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPHP 1084
            GS F++TK NL V+ G VVIAKNPCLHPGDVRILEAVD P L HL+DCL+FP+ GERPH 
Sbjct: 797  GSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLVFPRNGERPHT 856

Query: 1085 NEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNMV 1264
            NEASGSDLDGDLYF TWD NLIPPSKKSWPPM+Y P EVK   R +T  DI+EFF KNM+
Sbjct: 857  NEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKNMI 916

Query: 1265 NESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYPD 1444
            NESLGTICNAHVVHAD SK+GALDE CI+L+ELAA AVDFPKTGK+V+MPP LKPKLYPD
Sbjct: 917  NESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPD 976

Query: 1445 FMGKEELQSYKSTKILGKLYRRIRDAY-NQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            FMGKE  QSYKSTKILGK+YRRIRDAY + D   S +L +   ++ YD +LE+ G+ DFI
Sbjct: 977  FMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFI 1036

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
            A+AW  KCSYDGQL GLLGQYKVN E+E+VTGHIWSMPK  S+KQGELKE+LKH+YS L+
Sbjct: 1037 AEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLK 1096

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVL 1981
            KD+R+VFE +GP+F+QL+  E+N  YE+KASAWYQV+YH +W++KS EL++ D P    +
Sbjct: 1097 KDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPM 1156

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSF WIAADYL RIKI+ R+ ++   +KPI+SL  YL+D++
Sbjct: 1157 LSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score = 1027 bits (2655), Expect = 0.0
 Identities = 491/701 (70%), Positives = 579/701 (82%), Gaps = 1/701 (0%)
 Frame = +2

Query: 5    GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKSTTVDSIKNWMGKFTNRNVAKCAARMGQC 184
            GF+LCGRKYSFLA+SSNQLRD+SAWFFAE KS +VD+I  WMGKFTN+NVAKCAAR+GQC
Sbjct: 497  GFHLCGRKYSFLAYSSNQLRDQSAWFFAECKSISVDAILGWMGKFTNKNVAKCAARIGQC 556

Query: 185  FSSTYATVEVPPSQANHKLKDVERNNYVFSDGIGMISSDLAKEVAEKLQMHTNLPCAFQI 364
            FSSTYAT+EVP +  NH L DVERN YVFSDGIG I+ DLA+EVA+KL+M  + PCA+QI
Sbjct: 557  FSSTYATIEVPRNMVNHDLSDVERNGYVFSDGIGTITPDLAQEVADKLKMDGSPPCAYQI 616

Query: 365  RYAGYKGVVACWPAIKNGPRLQLRTSMRKFDSNHTTLEICSWTRFQPGFLNRQIVTLLSA 544
            RYAGYKGVVA WP+ K+G RL LR SM KF+SNH  LEICSWTRFQPGFLNRQI+TLLS 
Sbjct: 617  RYAGYKGVVATWPSKKDGIRLALRPSMNKFESNHRILEICSWTRFQPGFLNRQIITLLST 676

Query: 545  LEVEDDKFWRMQELMVSRLDCILEDPDMAFDVLTDSCTDHGNTAAMMLAAGFRPSNEPHL 724
            L V D+ FW MQE M+S+LD ++ D D+AF+VLT SC + GN AA+ML+AGF P  EPHL
Sbjct: 677  LSVPDEIFWSMQETMISKLDRMITDTDVAFEVLTASCAEQGNAAAIMLSAGFEPRTEPHL 736

Query: 725  RGMLSSIRVSQLGDLREKSRIFVHSGRWLMGCLDELGVLEYGQCFIQVSTPSLEDCFAKH 904
            RGML  IR +QL  LREK+RIFV  GRW MGC DE GVL+ GQCFIQVSTP LE CF+KH
Sbjct: 737  RGMLMCIRAAQLWGLREKARIFVTEGRWCMGCFDESGVLQEGQCFIQVSTPLLEKCFSKH 796

Query: 905  GSEFSKTKKNLEVITGLVVIAKNPCLHPGDVRILEAVDVPGLKHLHDCLIFPQKGERPHP 1084
            GS F++TK NL V+ G VVIAKNPCLHPGDVRILEAVD P L HL+DCL+FP+ GERPH 
Sbjct: 797  GSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPELHHLYDCLVFPRNGERPHT 856

Query: 1085 NEASGSDLDGDLYFVTWDDNLIPPSKKSWPPMDYEPGEVKEKPRGVTHSDIIEFFTKNMV 1264
            NEASGSDLDGDLYF TWD NLIPPSKKSWPPM+Y P EVK   R +T  DI+EFF KNM+
Sbjct: 857  NEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKNMI 916

Query: 1265 NESLGTICNAHVVHADTSKYGALDEKCIKLAELAAIAVDFPKTGKIVSMPPELKPKLYPD 1444
            NESLGTICNAHVVHAD SK+GALDE CI+L+ELAA AVDFPKTGK+V+MPP LKPKLYPD
Sbjct: 917  NESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPD 976

Query: 1445 FMGKEELQSYKSTKILGKLYRRIRDAY-NQDYEPSPQLTYPSENIFYDRELEITGSRDFI 1621
            FMGKE  QSYKSTKILGK+YRRIRDAY + D   S +L +   ++ YD +LE+ G+ DFI
Sbjct: 977  FMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTPGDVHYDVDLEVAGAEDFI 1036

Query: 1622 ADAWSCKCSYDGQLMGLLGQYKVNSEDEVVTGHIWSMPKSSSKKQGELKERLKHAYSALR 1801
            A+AW  KCSYDGQL GLLGQYKVN E+E+VTGHIWSMPK  S+KQGELKE+LKH+YS L+
Sbjct: 1037 AEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLK 1096

Query: 1802 KDYRKVFECMGPDFDQLSDHEKNVRYEQKASAWYQVSYHESWVEKSKELQKVDDPGKTVL 1981
            KD+R+VFE +GP+F+QL+  E+N  YE+KASAWYQV+YH +W++KS EL++ D P    +
Sbjct: 1097 KDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPM 1156

Query: 1982 LSFAWIAADYLTRIKIRQRKMENAISSKPIDSLGRYLADKI 2104
            LSF WIAADYL RIKI+ R+ ++   +KPI+SL  YL+D++
Sbjct: 1157 LSFPWIAADYLARIKIKCRRTKSFDPTKPINSLASYLSDRM 1197