BLASTX nr result

ID: Mentha25_contig00010816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00010816
         (356 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU46580.1| hypothetical protein MIMGU_mgv1a012642mg [Mimulus...   100   3e-19
gb|AFK36773.1| unknown [Lotus japonicus]                               60   3e-07
ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloro...    59   5e-07
ref|XP_004247171.1| PREDICTED: ribosome-recycling factor, chloro...    59   5e-07
ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloro...    59   5e-07
ref|XP_002302112.2| Ribosome recycling factor family protein [Po...    59   9e-07
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]       59   9e-07
gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea]            57   4e-06
ref|XP_004158409.1| PREDICTED: ribosome-recycling factor, chloro...    56   6e-06
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro...    56   6e-06

>gb|EYU46580.1| hypothetical protein MIMGU_mgv1a012642mg [Mimulus guttatus]
          Length = 244

 Score =  100 bits (248), Expect = 3e-19
 Identities = 56/106 (52%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASIAPKTRPSFPDFKNACLWSASANYAKLEV-ATRGVSAKSLSI 217
           MATTFS  SH+R+V  AS  PK R S PDF N   WSASANY KL+V A RG S K   +
Sbjct: 1   MATTFSPASHVRTVCYASNLPKNRLSVPDFGNVGCWSASANYVKLQVSAARGFSGKPFVV 60

Query: 218 KHTVTKRMGVVRSATXXXXXXXXXXXXXDVRERMEKTIDNVRSSFN 355
           K T  KR+GV++ AT              V+E+MEKTIDNV++SFN
Sbjct: 61  KQTWKKRIGVLKCATIEEIEAEKSMIEKAVKEKMEKTIDNVKTSFN 106


>gb|AFK36773.1| unknown [Lotus japonicus]
          Length = 231

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
 Frame = +2

Query: 44  ATTFSAVSHLRSVFSASIAPKTR----PSFPDFKNACLWSASANYAKLEVA-TRGVSAKS 208
           AT+FS  + +RS+F     PKT      SF   K + + SASA+Y  L+++ T  +SAK 
Sbjct: 3   ATSFSPATPVRSIFQNP--PKTTLFLPESFYGVKRSSI-SASASYVTLKLSRTLTLSAKP 59

Query: 209 LSIKHTVTKRMGVVRSATXXXXXXXXXXXXXDVRERMEKTIDNVRSSFN 355
           + + H   +RMG+VR+AT             DVR RMEKTI+NVRS+FN
Sbjct: 60  I-LSH---RRMGIVRAATMEEIEAEKKAIEKDVRNRMEKTIENVRSNFN 104


>ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Solanum
           tuberosum]
          Length = 267

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/79 (43%), Positives = 43/79 (54%)
 Frame = +2

Query: 119 FPDFKNACLWSASANYAKLEVATRGVSAKSLSIKHTVTKRMGVVRSATXXXXXXXXXXXX 298
           FP   N   WSASANY+ L V  R +      +K +  KR G+VR AT            
Sbjct: 32  FPTSGNVVCWSASANYSSLWVGARRLQPL---VKPSWGKRSGIVRCATIEEIEAEKSSIE 88

Query: 299 XDVRERMEKTIDNVRSSFN 355
            DV+ERMEKT++ VRS+FN
Sbjct: 89  KDVKERMEKTVETVRSNFN 107


>ref|XP_004247171.1| PREDICTED: ribosome-recycling factor, chloroplastic-like isoform 2
           [Solanum lycopersicum]
          Length = 263

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/79 (43%), Positives = 43/79 (54%)
 Frame = +2

Query: 119 FPDFKNACLWSASANYAKLEVATRGVSAKSLSIKHTVTKRMGVVRSATXXXXXXXXXXXX 298
           FP   N   WSASANY+ L V  R +      +K +  KR G+VR AT            
Sbjct: 32  FPTSGNVVCWSASANYSSLWVGARRLQPL---VKPSWGKRSGIVRCATIEEIEAEKSSIE 88

Query: 299 XDVRERMEKTIDNVRSSFN 355
            DV+ERMEKT++ VRS+FN
Sbjct: 89  KDVKERMEKTVETVRSNFN 107


>ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloroplastic-like isoform 1
           [Solanum lycopersicum]
          Length = 267

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/79 (43%), Positives = 43/79 (54%)
 Frame = +2

Query: 119 FPDFKNACLWSASANYAKLEVATRGVSAKSLSIKHTVTKRMGVVRSATXXXXXXXXXXXX 298
           FP   N   WSASANY+ L V  R +      +K +  KR G+VR AT            
Sbjct: 32  FPTSGNVVCWSASANYSSLWVGARRLQPL---VKPSWGKRSGIVRCATIEEIEAEKSSIE 88

Query: 299 XDVRERMEKTIDNVRSSFN 355
            DV+ERMEKT++ VRS+FN
Sbjct: 89  KDVKERMEKTVETVRSNFN 107


>ref|XP_002302112.2| Ribosome recycling factor family protein [Populus trichocarpa]
           gi|550344331|gb|EEE81385.2| Ribosome recycling factor
           family protein [Populus trichocarpa]
          Length = 286

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/71 (40%), Positives = 42/71 (59%)
 Frame = +2

Query: 143 LWSASANYAKLEVATRGVSAKSLSIKHTVTKRMGVVRSATXXXXXXXXXXXXXDVRERME 322
           LWS+SANY+ L   +  +S K +++K  +  R GVVR+AT             D + RME
Sbjct: 56  LWSSSANYSSLRNGSTKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRME 115

Query: 323 KTIDNVRSSFN 355
           KTID +R++FN
Sbjct: 116 KTIDTMRANFN 126


>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/71 (40%), Positives = 42/71 (59%)
 Frame = +2

Query: 143 LWSASANYAKLEVATRGVSAKSLSIKHTVTKRMGVVRSATXXXXXXXXXXXXXDVRERME 322
           LWS+SANY+ L   +  +S K +++K  +  R GVVR+AT             D + RME
Sbjct: 56  LWSSSANYSSLRNGSSKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRME 115

Query: 323 KTIDNVRSSFN 355
           KTID +R++FN
Sbjct: 116 KTIDTMRTNFN 126


>gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea]
          Length = 278

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 44/119 (36%), Positives = 69/119 (57%), Gaps = 14/119 (11%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASIAPKTRP----SFPDF-----KNACL---WSASANYAKLEVA 184
           MAT+FS    L SV S SI P+  P    S P+F      ++C+   W++S++Y  L+++
Sbjct: 1   MATSFSPTPTLPSVRS-SIFPQNPPKPLLSLPEFFRGGSNSSCVKRSWASSSSYVTLKLS 59

Query: 185 TR-GVSAKSLSIKHTVT-KRMGVVRSATXXXXXXXXXXXXXDVRERMEKTIDNVRSSFN 355
               VSA+ L  K T+  +RMG+VR+AT             DV+ RME++I++VR++FN
Sbjct: 60  NAFRVSARPLLSKGTLLHRRMGIVRAATIEEIEAEKAAIEKDVKIRMERSIESVRANFN 118


>ref|XP_004158409.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 270

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASIAPKTRPSFPDFKNA-------------CLWSASANYAKLEV 181
           MAT FSA + +R     +  PK+  S  D+                C W +++NY +L  
Sbjct: 1   MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNR 60

Query: 182 ATRGVSAKSLSIKHTVTK-RMGVVRSATXXXXXXXXXXXXXDVRERMEKTIDNVRSSFN 355
               +S + LS+   V K R  VVR+AT             DV+ RMEKTID VRS+FN
Sbjct: 61  QALVISTQ-LSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFN 118


>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
 Frame = +2

Query: 41  MATTFSAVSHLRSVFSASIAPKTRPSFPDFKNA-------------CLWSASANYAKLEV 181
           MAT FSA + +R     +  PK+  S  D+                C W +++NY +L  
Sbjct: 1   MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNR 60

Query: 182 ATRGVSAKSLSIKHTVTK-RMGVVRSATXXXXXXXXXXXXXDVRERMEKTIDNVRSSFN 355
               +S + LS+   V K R  VVR+AT             DV+ RMEKTID VRS+FN
Sbjct: 61  QALVISTQ-LSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFN 118


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