BLASTX nr result
ID: Mentha25_contig00010513
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00010513
(372 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU19293.1| hypothetical protein MIMGU_mgv1a017958mg [Mimulus... 90 1e-24
gb|EYU40958.1| hypothetical protein MIMGU_mgv1a026647mg, partial... 93 2e-23
gb|EYU40957.1| hypothetical protein MIMGU_mgv11b022113mg [Mimulu... 83 2e-20
ref|XP_007032116.1| Pentatricopeptide repeat superfamily protein... 77 3e-18
ref|XP_004296042.1| PREDICTED: putative pentatricopeptide repeat... 84 1e-17
gb|EYU19842.1| hypothetical protein MIMGU_mgv1a026016mg [Mimulus... 86 4e-17
ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi... 84 5e-17
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,... 72 6e-17
ref|XP_004309354.1| PREDICTED: putative pentatricopeptide repeat... 81 6e-17
ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Popu... 72 8e-17
gb|EYU40948.1| hypothetical protein MIMGU_mgv1a018622mg, partial... 86 1e-16
dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana] 76 2e-16
ref|NP_188886.1| pentatricopeptide repeat-containing protein [Ar... 76 2e-16
gb|EYU45465.1| hypothetical protein MIMGU_mgv1a003559mg [Mimulus... 71 2e-16
ref|XP_004296039.1| PREDICTED: putative pentatricopeptide repeat... 80 3e-16
ref|XP_003603286.1| Pentatricopeptide repeat-containing protein ... 68 1e-15
ref|XP_003591979.1| Pentatricopeptide repeat-containing protein ... 82 2e-15
ref|XP_006292855.1| hypothetical protein CARUB_v10019115mg [Caps... 79 2e-15
ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arab... 65 2e-15
ref|XP_007011706.1| Pentatricopeptide repeat-containing protein,... 71 2e-15
>gb|EYU19293.1| hypothetical protein MIMGU_mgv1a017958mg [Mimulus guttatus]
Length = 383
Score = 89.7 bits (221), Expect(2) = 1e-24
Identities = 40/92 (43%), Positives = 64/92 (69%)
Frame = -3
Query: 277 NELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKR 98
NEL SKG++PN+ + +++G+LC++G ++EA+DL+V+M SGC+P+S TYN +V G +K+
Sbjct: 272 NELPSKGLKPNIKIYTVILGSLCRKGCVDEAEDLIVKMERSGCAPNSVTYNYIVQGLLKK 331
Query: 97 NKIDDAIPLLDEMERRGLILHPGALKMLLPHL 2
++ AIP L+EM RG ML+ L
Sbjct: 332 KEVYKAIPFLEEMHERGFSADAATSSMLISRL 363
Score = 49.3 bits (116), Expect(2) = 1e-24
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
L VMEN+G+NPDI+TY ILI GLC D KLD
Sbjct: 236 LRVMENKGLNPDIITYGILINGLCKDGKLD 265
Score = 64.3 bits (155), Expect(2) = 1e-11
Identities = 31/78 (39%), Positives = 48/78 (61%)
Frame = -3
Query: 277 NELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKR 98
NE+ ++ + VVTF+IL+ A C+EGN++EA+D+L M P+ TYN L+ GY +
Sbjct: 62 NEMVNRKISLTVVTFSILVDAFCKEGNVKEAEDILEIMKQQNICPNIVTYNALIDGYCLQ 121
Query: 97 NKIDDAIPLLDEMERRGL 44
K+D A + D + GL
Sbjct: 122 RKMDKAKEVFDSITSSGL 139
Score = 30.8 bits (68), Expect(2) = 1e-11
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = -2
Query: 353 EGVNPDIVTYTILIEGLC 300
+G++PD+VTY +I+GLC
Sbjct: 32 KGISPDVVTYNSMIQGLC 49
Score = 52.8 bits (125), Expect(2) = 9e-10
Identities = 24/84 (28%), Positives = 46/84 (54%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
++ + S G++P ++++N LI C+ G ++EA L +++ G + TYN ++ G
Sbjct: 131 FDSITSSGLKPCIISYNSLINGYCKNGKVDEALRLFLEVSSKGLEHTTVTYNTMIHGLFS 190
Query: 100 RNKIDDAIPLLDEMERRGLILHPG 29
+ D L ++ME R +HPG
Sbjct: 191 EGRFADGWKLFNDMEARQ--VHPG 212
Score = 35.8 bits (81), Expect(2) = 9e-10
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
L++M+ + + P+IVTY LI+G C +K+D
Sbjct: 96 LEIMKQQNICPNIVTYNALIDGYCLQRKMD 125
Score = 65.1 bits (157), Expect = 1e-08
Identities = 37/95 (38%), Positives = 55/95 (57%)
Frame = -3
Query: 328 HILFSSRDFAVIKSLTYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGC 149
H LFS FA L +N++ ++ V P + T+NIL+ LC+ + EA L M + G
Sbjct: 186 HGLFSEGRFADGWKL-FNDMEARQVHPGLFTYNILMDVLCRTHQIAEAFSFLRVMENKGL 244
Query: 148 SPDSGTYNILVGGYVKRNKIDDAIPLLDEMERRGL 44
+PD TY IL+ G K K+DDA +L+E+ +GL
Sbjct: 245 NPDIITYGILINGLCKDGKLDDAKMILNELPSKGL 279
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/73 (35%), Positives = 44/73 (60%)
Frame = -3
Query: 262 KGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDD 83
+ + PN+VT+N LI C + +++AK++ + SG P +YN L+ GY K K+D+
Sbjct: 102 QNICPNIVTYNALIDGYCLQRKMDKAKEVFDSITSSGLKPCIISYNSLINGYCKNGKVDE 161
Query: 82 AIPLLDEMERRGL 44
A+ L E+ +GL
Sbjct: 162 ALRLFLEVSSKGL 174
>gb|EYU40958.1| hypothetical protein MIMGU_mgv1a026647mg, partial [Mimulus
guttatus]
Length = 334
Score = 92.8 bits (229), Expect(2) = 2e-23
Identities = 42/92 (45%), Positives = 66/92 (71%)
Frame = -3
Query: 277 NELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKR 98
NEL SKG+QPN+ + ++I ALC+EG ++EAKD+L++M SGC+PDS TYN ++ +K+
Sbjct: 223 NELPSKGLQPNIKIYAVIIRALCEEGFVDEAKDVLIKMERSGCAPDSMTYNTIICCLLKK 282
Query: 97 NKIDDAIPLLDEMERRGLILHPGALKMLLPHL 2
++ A+PLL+E+ +RG L ML+ +L
Sbjct: 283 KEVYKALPLLEEIHKRGFSADASTLSMLISYL 314
Score = 41.6 bits (96), Expect(2) = 2e-23
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
L ME++GV+P+I+TY ILI GLC D KL+
Sbjct: 187 LRAMEDKGVSPNIITYGILINGLCKDGKLE 216
Score = 59.7 bits (143), Expect(2) = 2e-08
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 9/87 (10%)
Frame = -3
Query: 277 NELGSKGVQPNVVTFNILIGALCQEGNLEEA---------KDLLVQMVDSGCSPDSGTYN 125
NE+ + + +VVT N+L+ A C+EGN++EA K+L + +G P +Y
Sbjct: 82 NEMVNHKISLDVVTLNVLVDAFCKEGNVKEAREQEKMDKAKELFDSITGNGLKPSIISYG 141
Query: 124 ILVGGYVKRNKIDDAIPLLDEMERRGL 44
L+ GY KR K+D+A+ L E +GL
Sbjct: 142 TLMNGYCKRGKVDEALRLFLEASSKGL 168
Score = 24.6 bits (52), Expect(2) = 2e-08
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 341 PDIVTYTILIEGLCSDKKLD 282
PD+ Y +I GLC + LD
Sbjct: 34 PDVKAYNAVINGLCKNGTLD 53
>gb|EYU40957.1| hypothetical protein MIMGU_mgv11b022113mg [Mimulus guttatus]
Length = 233
Score = 82.8 bits (203), Expect(2) = 2e-20
Identities = 36/77 (46%), Positives = 57/77 (74%)
Frame = -3
Query: 277 NELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKR 98
NEL SKG+QP+ + I++G+LC+EG ++E KDLL++M SGC+P S TYNI++ +K+
Sbjct: 149 NELPSKGLQPDCQVYRIVLGSLCEEGFVDEEKDLLIKMETSGCAPHSMTYNIIIHCLLKK 208
Query: 97 NKIDDAIPLLDEMERRG 47
+ A+P L++M +RG
Sbjct: 209 KDVYKAMPFLEDMHKRG 225
Score = 41.6 bits (96), Expect(2) = 2e-20
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = -2
Query: 365 VMENEGVNPDIVTYTILIEGLCSDKKLD 282
VME++GV+P+I+TY I+I GLC D KL+
Sbjct: 115 VMEDKGVSPNIITYDIVINGLCKDGKLE 142
Score = 60.1 bits (144), Expect(2) = 4e-10
Identities = 29/79 (36%), Positives = 48/79 (60%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+N + ++ V P++ T+NIL+ LC + EA + M D G SP+ TY+I++ G K
Sbjct: 78 FNHMEARKVHPSICTYNILMECLCGTRKIVEAFSFVRVMEDKGVSPNIITYDIVINGLCK 137
Query: 100 RNKIDDAIPLLDEMERRGL 44
K++DA LL+E+ +GL
Sbjct: 138 DGKLEDAKKLLNELPSKGL 156
Score = 29.6 bits (65), Expect(2) = 4e-10
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 368 DVMENEGVNPDIVTYTILIEGLCSDKKLD 282
D + G+ P I++Y ILI G C K+D
Sbjct: 9 DSVTGNGLKPSIMSYDILINGYCKKGKVD 37
>ref|XP_007032116.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508711145|gb|EOY03042.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 658
Score = 77.0 bits (188), Expect(2) = 3e-18
Identities = 39/94 (41%), Positives = 58/94 (61%)
Frame = -3
Query: 283 TYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYV 104
TY + SKG++P++V FN LI LC+ G+L+EAK+L+ +M G PD TY IL+ G+
Sbjct: 360 TYQRILSKGLKPDLVMFNTLINGLCKAGDLKEAKNLIAEMSLRGLKPDKFTYTILIDGFC 419
Query: 103 KRNKIDDAIPLLDEMERRGLILHPGALKMLLPHL 2
K ++ AI + DEM + G+ L A L+ L
Sbjct: 420 KEGNMELAIEIRDEMVKHGIELDNVAFTALISGL 453
Score = 40.0 bits (92), Expect(2) = 3e-18
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
ME+ G+ PD+ TY++LI GLC + +LD
Sbjct: 294 MEDSGIRPDVFTYSVLINGLCKESRLD 320
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = -3
Query: 286 LTYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGY 107
+ +NE+G +G++ VV+FN LI C+ GNL E L M DSG PD TY++L+ G
Sbjct: 254 MVFNEIGKRGLRATVVSFNTLINGYCKSGNLGEGFRLKRAMEDSGIRPDVFTYSVLINGL 313
Query: 106 VKRNKIDDAIPLLDEMERRGLI 41
K +++DDA L +EM RGL+
Sbjct: 314 CKESRLDDANGLFEEMCNRGLV 335
Score = 57.0 bits (136), Expect(2) = 9e-10
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = -3
Query: 277 NELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKR 98
+E+ G++ + V F LI LC+EG L +A+ L +M+ +G PD TY +++ G+ K
Sbjct: 432 DEMVKHGIELDNVAFTALISGLCREGRLIDAERTLREMLSAGMKPDDATYTMVIDGFCKN 491
Query: 97 NKIDDAIPLLDEMERRGLILHPGAL 23
+ LL EM+ G + PG +
Sbjct: 492 GNVKMGFKLLKEMQSDGHV--PGVI 514
Score = 31.6 bits (70), Expect(2) = 9e-10
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLDI 279
M G+ PD TYTILI+G C + +++
Sbjct: 399 MSLRGLKPDKFTYTILIDGFCKEGNMEL 426
Score = 58.2 bits (139), Expect(2) = 6e-09
Identities = 33/91 (36%), Positives = 49/91 (53%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
E+ S G P V+T+N+L+ LC+ G ++ A LL M+ G PD TYNIL+ G+ K+
Sbjct: 503 EMQSDGHVPGVITYNVLMNGLCKLGQMKNANMLLDAMIGLGVVPDDITYNILLDGHCKKG 562
Query: 94 KIDDAIPLLDEMERRGLILHPGALKMLLPHL 2
D L EM GL+ + K L+ +
Sbjct: 563 NPKDFNRLKSEM---GLVADYASYKSLISQI 590
Score = 27.7 bits (60), Expect(2) = 6e-09
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSD 294
M + G+ PD TYT++I+G C +
Sbjct: 469 MLSAGMKPDDATYTMVIDGFCKN 491
Score = 50.8 bits (120), Expect(2) = 7e-08
Identities = 25/77 (32%), Positives = 43/77 (55%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
E+ +G++P+ T+ ILI C+EGN+E A ++ +MV G D+ + L+ G +
Sbjct: 398 EMSLRGLKPDKFTYTILIDGFCKEGNMELAIEIRDEMVKHGIELDNVAFTALISGLCREG 457
Query: 94 KIDDAIPLLDEMERRGL 44
++ DA L EM G+
Sbjct: 458 RLIDAERTLREMLSAGM 474
Score = 31.2 bits (69), Expect(2) = 7e-08
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLDIQ*TRVQ 261
M N G+ P+ VT+T LI+G C + ++D+ T Q
Sbjct: 329 MCNRGLVPNDVTFTTLIDGQCKNGRIDLAMTTYQ 362
>ref|XP_004296042.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 563
Score = 83.6 bits (205), Expect(2) = 1e-17
Identities = 38/80 (47%), Positives = 57/80 (71%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
++ L SKGVQPNV T+N++I LC+ G L EA+ LL +M GCSPDS TY I++ G++
Sbjct: 359 FSSLSSKGVQPNVRTYNVMINGLCKGGLLVEAEKLLREMGAKGCSPDSCTYKIIIRGFIN 418
Query: 100 RNKIDDAIPLLDEMERRGLI 41
N+I A+ L++EM+ G++
Sbjct: 419 NNEISRAVQLIEEMKGDGVL 438
Score = 32.0 bits (71), Expect(2) = 1e-17
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
ME++ + DIV YT++IEG+C KL+
Sbjct: 327 MEDKKMELDIVIYTVIIEGMCKAGKLE 353
Score = 61.6 bits (148), Expect(2) = 9e-11
Identities = 28/88 (31%), Positives = 54/88 (61%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
E+ S+ + PNVVT+++L+ LC+EG + EA ++ M+ P++ TY+ L+ GY R
Sbjct: 151 EMASRNIYPNVVTYSVLVDGLCKEGKVVEANSVVEIMIRKDIEPNAITYSSLMDGYCLRG 210
Query: 94 KIDDAIPLLDEMERRGLILHPGALKMLL 11
++ +A + D M R+G ++ + +L+
Sbjct: 211 EMGEARKIFDLMLRKGCMVDVWSCTILI 238
Score = 30.4 bits (67), Expect(2) = 9e-11
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCS 297
M + G+ P++VTYT LI+G+C+
Sbjct: 117 MISRGIAPNVVTYTSLIQGVCN 138
Score = 59.7 bits (143), Expect(2) = 1e-10
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = -3
Query: 262 KGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDD 83
K ++PN +T++ L+ C G + EA+ + M+ GC D + IL+ GY K KID
Sbjct: 190 KDIEPNAITYSSLMDGYCLRGEMGEARKIFDLMLRKGCMVDVWSCTILINGYCKHKKIDQ 249
Query: 82 AIPLLDEMERRGLI 41
AI L +EM R L+
Sbjct: 250 AIELFEEMLRLELV 263
Score = 32.0 bits (71), Expect(2) = 1e-10
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKL 285
M + + P++VTY++L++GLC + K+
Sbjct: 152 MASRNIYPNVVTYSVLVDGLCKEGKV 177
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = -3
Query: 310 RDFAVIKSLT-YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSG 134
+D V+ +++ ++E+ S+G+ PNVVT+ LI +C G EEA LL +M P+
Sbjct: 103 KDTLVVDAMSLFSEMISRGIAPNVVTYTSLIQGVCNTGQFEEATKLLYEMASRNIYPNVV 162
Query: 133 TYNILVGGYVKRNKIDDAIPLLDEMERRGL 44
TY++LV G K K+ +A +++ M R+ +
Sbjct: 163 TYSVLVDGLCKEGKVVEANSVVEIMIRKDI 192
Score = 50.8 bits (120), Expect(2) = 2e-07
Identities = 23/76 (30%), Positives = 41/76 (53%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
E+ K ++ ++V + ++I +C+ G LE A D + G P+ TYN+++ G K
Sbjct: 326 EMEDKKMELDIVIYTVIIEGMCKAGKLESATDFFSSLSSKGVQPNVRTYNVMINGLCKGG 385
Query: 94 KIDDAIPLLDEMERRG 47
+ +A LL EM +G
Sbjct: 386 LLVEAEKLLREMGAKG 401
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2
Query: 350 GVNPDIVTYTILIEGLCSDKKL 285
G+ P++ TY IL++GLCS ++L
Sbjct: 296 GLLPNVQTYAILLDGLCSSQQL 317
Score = 49.3 bits (116), Expect(2) = 8e-07
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
++ L S G+ PNV T+ IL+ LC L A DLL +M D D Y +++ G K
Sbjct: 289 FSRLLSCGLLPNVQTYAILLDGLCSSQQLSRAMDLLREMEDKKMELDIVIYTVIIEGMCK 348
Query: 100 RNKIDDAIPLLDEMERRGL 44
K++ A + +G+
Sbjct: 349 AGKLESATDFFSSLSSKGV 367
Score = 29.3 bits (64), Expect(2) = 8e-07
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -2
Query: 368 DVMENEGVNPDIVTYTILIEGLCSDKKLD 282
D+M +G D+ + TILI G C KK+D
Sbjct: 220 DLMLRKGCMVDVWSCTILINGYCKHKKID 248
>gb|EYU19842.1| hypothetical protein MIMGU_mgv1a026016mg [Mimulus guttatus]
Length = 415
Score = 85.5 bits (210), Expect(2) = 4e-17
Identities = 41/91 (45%), Positives = 58/91 (63%)
Frame = -3
Query: 283 TYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYV 104
T++EL G++PNVVT+NILI CQ G L+EAKDL ++M +G PD TYNI+V GY+
Sbjct: 316 TFSELPCIGLEPNVVTYNILINGCCQNGLLDEAKDLFLKMERAGLLPDCVTYNIIVQGYL 375
Query: 103 KRNKIDDAIPLLDEMERRGLILHPGALKMLL 11
K + D A+ L++M +G M+L
Sbjct: 376 KSGEFDGAVTFLEQMSAKGFSQDSSTFTMML 406
Score = 28.1 bits (61), Expect(2) = 4e-17
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 368 DVMENEGVNPDIVTYTILIEGLCSDKKLD 282
D ++ +G N I Y+I+++GLC +LD
Sbjct: 283 DELKRKGENRHISYYSIIMDGLCKANRLD 311
Score = 54.7 bits (130), Expect(2) = 2e-07
Identities = 24/72 (33%), Positives = 44/72 (61%)
Frame = -3
Query: 262 KGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDD 83
KG+ PN+VT++ L+ L G A +L ++ G P+ TY +L+ G K +++++
Sbjct: 218 KGLNPNLVTYSSLLQGLFLSGRFSSALELFDELRGVGLKPNFHTYCVLLDGLCKNDRVEE 277
Query: 82 AIPLLDEMERRG 47
A+ L DE++R+G
Sbjct: 278 ALSLFDELKRKG 289
Score = 26.2 bits (56), Expect(2) = 2e-07
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 368 DVMENEGVNPDIVTYTILIEGLC 300
D M G+ PD+VT + LI G C
Sbjct: 175 DRMSERGIAPDVVTCSALICGYC 197
>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product
[Vitis vinifera]
Length = 627
Score = 83.6 bits (205), Expect(2) = 5e-17
Identities = 40/79 (50%), Positives = 53/79 (67%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+NE+ +GV PNVVTFN+LI ALC+ G +EEA LL M+ G SPD+ TYN L+ G+
Sbjct: 296 FNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL 355
Query: 100 RNKIDDAIPLLDEMERRGL 44
+IDDA L ME +G+
Sbjct: 356 EGRIDDARDLFVSMESKGI 374
Score = 29.6 bits (65), Expect(2) = 5e-17
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLC 300
M+ G++PD+V Y+ +I G+C
Sbjct: 264 MKGRGISPDVVAYSSIIHGMC 284
Score = 73.2 bits (178), Expect = 4e-11
Identities = 32/91 (35%), Positives = 57/91 (62%)
Frame = -3
Query: 322 LFSSRDFAVIKSLTYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSP 143
L +R + + L +N L +G++PNV+T+ ++I LC+ G LE AKDL + M + GC+P
Sbjct: 493 LCKARKIEIAREL-FNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAP 551
Query: 142 DSGTYNILVGGYVKRNKIDDAIPLLDEMERR 50
+ T+N L+ G+ + +++ + LL EM +
Sbjct: 552 NLVTFNTLMRGFCQNDEMQKVVELLQEMAEK 582
Score = 55.8 bits (133), Expect(2) = 6e-09
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
Y E+ K + P V+T+N L+ L +EG + +A +L +M +P+S TYNIL+ G K
Sbjct: 401 YREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCK 460
Query: 100 RNKIDDAIPLLDEME 56
N + +A+ L +E
Sbjct: 461 NNHLSEAMELFHYLE 475
Score = 30.0 bits (66), Expect(2) = 6e-09
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
L +M G +PD TY LI+G C + ++D
Sbjct: 331 LKLMIQRGESPDTFTYNTLIDGFCLEGRID 360
Score = 49.3 bits (116), Expect(2) = 2e-08
Identities = 25/72 (34%), Positives = 39/72 (54%)
Frame = -3
Query: 262 KGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDD 83
KG PN+VTFN L+ CQ +++ +LL +M + SPD+ T +I+V K K +
Sbjct: 547 KGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYRE 606
Query: 82 AIPLLDEMERRG 47
+ LL +G
Sbjct: 607 YLHLLPTFPAQG 618
Score = 35.0 bits (79), Expect(2) = 2e-08
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
+ +EG+ P+++TYT++I GLC +L+
Sbjct: 509 LSHEGLEPNVITYTVMIHGLCKSGQLE 535
>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1113
Score = 72.4 bits (176), Expect(2) = 6e-17
Identities = 33/80 (41%), Positives = 53/80 (66%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
++E+ + G P+V+TF IL+ ALC+ GN++EA LL M G P+ TYN L+ G ++
Sbjct: 357 WSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLR 416
Query: 100 RNKIDDAIPLLDEMERRGLI 41
N++DDA+ L + ME G++
Sbjct: 417 VNRLDDALDLFNNMETLGVV 436
Score = 40.4 bits (93), Expect(2) = 6e-17
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
ME++G PD+VTYT+LI+ LC+ KLD
Sbjct: 290 MEDDGCGPDVVTYTVLIDALCTAGKLD 316
Score = 60.1 bits (144), Expect(2) = 8e-11
Identities = 27/75 (36%), Positives = 48/75 (64%)
Frame = -3
Query: 283 TYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYV 104
T+ ++ +G+ PN+V N + +L + G L EAK + ++ +G +PDS TYN+++ Y
Sbjct: 461 TFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYS 520
Query: 103 KRNKIDDAIPLLDEM 59
K ++D+AI LL +M
Sbjct: 521 KAGQVDEAIELLSDM 535
Score = 32.0 bits (71), Expect(2) = 8e-11
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
LDVM +GV P++ TY LI GL +LD
Sbjct: 392 LDVMRKQGVLPNLHTYNTLISGLLRVNRLD 421
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = -3
Query: 310 RDFAVIKSLTYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGT 131
RD +KSL E+ S G++PN+ T+ I I L + G ++EA ++ +M D GC PD T
Sbjct: 243 RDTETVKSLL-EEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVT 301
Query: 130 YNILVGGYVKRNKIDDAIPLLDEME 56
Y +L+ K+DDA+ L +M+
Sbjct: 302 YTVLIDALCTAGKLDDAMELFVKMK 326
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/79 (37%), Positives = 44/79 (55%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ +L S P T+ L+ L + G LEEAK+L +MVD GC P++ YNIL+ G+ K
Sbjct: 883 FYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGK 942
Query: 100 RNKIDDAIPLLDEMERRGL 44
++ A L M R G+
Sbjct: 943 TGDVNTACELFKRMVREGI 961
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = -3
Query: 262 KGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDD 83
+GV PN+ T+N LI L + L++A DL M G P + TY + + Y K + D
Sbjct: 398 QGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDK 457
Query: 82 AIPLLDEMERRGL 44
A+ ++M+ RG+
Sbjct: 458 ALETFEKMKIRGI 470
Score = 32.7 bits (73), Expect(2) = 2e-07
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
ME +G PD++T+TIL+ LC +D
Sbjct: 360 MEADGYAPDVITFTILVNALCKAGNID 386
Score = 57.0 bits (136), Expect = 3e-06
Identities = 22/79 (27%), Positives = 50/79 (63%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ + +G++P++ ++ L+G LC+ G +++A ++ +G DS YN+++ G +
Sbjct: 953 FKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGR 1012
Query: 100 RNKIDDAIPLLDEMERRGL 44
++I++A+ L DEM+ RG+
Sbjct: 1013 SHRIEEALTLYDEMQSRGI 1031
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/74 (33%), Positives = 45/74 (60%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ E+ + G P+V T+N+L+ A + G + E +L QM+ S C P++ T+NI++ VK
Sbjct: 813 FTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVK 872
Query: 100 RNKIDDAIPLLDEM 59
N +D A+ L ++
Sbjct: 873 SNSLDKALDLFYDL 886
>ref|XP_004309354.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 148
Score = 80.9 bits (198), Expect(2) = 6e-17
Identities = 36/78 (46%), Positives = 51/78 (65%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ L KGVQPNV T+NI+I +C+ G L EA++LL +M GCSPD TYN ++ G++
Sbjct: 33 FRGLSPKGVQPNVRTYNIMISGVCKAGLLVEAEELLTEMEQKGCSPDDCTYNTIIRGFIN 92
Query: 100 RNKIDDAIPLLDEMERRG 47
N+ A L++EM RG
Sbjct: 93 NNETSRATSLIEEMHERG 110
Score = 32.0 bits (71), Expect(2) = 6e-17
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLC 300
ME + PDIV Y I+IEGLC
Sbjct: 1 MEGNKLKPDIVAYNIIIEGLC 21
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/70 (38%), Positives = 44/70 (62%)
Frame = -3
Query: 256 VQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDDAI 77
++P++V +NI+I LC+ G ++ AKDL + G P+ TYNI++ G K + +A
Sbjct: 6 LKPDIVAYNIIIEGLCKAGEVQSAKDLFRGLSPKGVQPNVRTYNIMISGVCKAGLLVEAE 65
Query: 76 PLLDEMERRG 47
LL EME++G
Sbjct: 66 ELLTEMEQKG 75
>ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Populus trichocarpa]
gi|550337245|gb|EEE92232.2| hypothetical protein
POPTR_0006s28060g [Populus trichocarpa]
Length = 1115
Score = 71.6 bits (174), Expect(2) = 8e-17
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ E+ + G P+VVTF IL+ ALC+ G + EA DLL M G P+ TYN L+ G ++
Sbjct: 357 WTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLR 416
Query: 100 RNKIDDAIPLLDEMERRGL 44
N++DDA+ L ME G+
Sbjct: 417 ANRLDDALDLFSNMESLGV 435
Score = 40.8 bits (94), Expect(2) = 8e-17
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
M+++G PD+VTYT+LI+ LC+ +KLD
Sbjct: 290 MDDDGCGPDVVTYTVLIDALCTARKLD 316
Score = 63.5 bits (153), Expect(2) = 2e-11
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = -3
Query: 283 TYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYV 104
T+ ++ ++G+ PN+V N + +L + G L EAK + ++ SG +PDS TYN+++ Y
Sbjct: 461 TFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYS 520
Query: 103 KRNKIDDAIPLLDEMER 53
K ++D+AI LL EM +
Sbjct: 521 KVGQVDEAIKLLSEMSK 537
Score = 30.8 bits (68), Expect(2) = 2e-11
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
LD M +GV P++ TY LI GL +LD
Sbjct: 392 LDTMRKQGVLPNLHTYNTLISGLLRANRLD 421
Score = 56.6 bits (135), Expect(2) = 7e-08
Identities = 30/79 (37%), Positives = 39/79 (49%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
Y L S P TF LI L + G L++A ++ MV GC P+S YNILV GY K
Sbjct: 883 YYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGK 942
Query: 100 RNKIDDAIPLLDEMERRGL 44
+D A M + G+
Sbjct: 943 LGHVDTACEFFKRMVKEGI 961
Score = 25.4 bits (54), Expect(2) = 7e-08
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 368 DVMENEGVNPDIVTYTILIEGLCSDKKLD 282
D M G P+ +TY ++I L +LD
Sbjct: 849 DEMLTRGCKPNTITYNMVISNLVKSNRLD 877
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
E+ S G++PN+ T+ I I L ++G ++EA ++ +M D GC PD TY +L+
Sbjct: 254 EMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTAR 313
Query: 94 KIDDAIPLLDEME 56
K+DDA+ L +M+
Sbjct: 314 KLDDAMCLFTKMK 326
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 23/80 (28%), Positives = 45/80 (56%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ ++ S +P+ VT+ L+ G+L++ + + +M G +PD T+ ILV K
Sbjct: 322 FTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCK 381
Query: 100 RNKIDDAIPLLDEMERRGLI 41
+I++A LLD M ++G++
Sbjct: 382 AGRINEAFDLLDTMRKQGVL 401
Score = 31.2 bits (69), Expect(2) = 5e-07
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
L+ ME+ G+ P+I TYTI I L D K+D
Sbjct: 252 LEEMESMGLRPNIYTYTICIRVLGRDGKID 281
Score = 59.3 bits (142), Expect = 5e-07
Identities = 24/76 (31%), Positives = 44/76 (57%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ + G PN +TFN L+ LC+ ++ A + +M C PD T+N ++ G++K
Sbjct: 602 FESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIK 661
Query: 100 RNKIDDAIPLLDEMER 53
+N+I +AI L +M++
Sbjct: 662 QNQIKNAIWLFHQMKK 677
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = -3
Query: 259 GVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDDA 80
GV+P + +N+LI + N+E A +L +M +GC+PD+ TYN L+ + K KI++
Sbjct: 785 GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINEL 844
Query: 79 IPLLDEMERRG 47
L DEM RG
Sbjct: 845 FDLYDEMLTRG 855
Score = 46.2 bits (108), Expect(2) = 1e-06
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = -3
Query: 262 KGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDD 83
+GV PN+ T+N LI L + L++A DL M G P + TY +L+ + K
Sbjct: 398 QGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGK 457
Query: 82 AIPLLDEMERRGL 44
A+ ++M+ RG+
Sbjct: 458 ALETFEKMKARGI 470
Score = 32.0 bits (71), Expect(2) = 1e-06
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
ME +G PD+VT+TIL+ LC +++
Sbjct: 360 MEADGYAPDVVTFTILVNALCKAGRIN 386
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
Y+E+ ++G +PN +T+N++I L + L++A DL +V SP T+ L+ G +K
Sbjct: 848 YDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLK 907
Query: 100 RNKIDDAIPLLDEMERRG 47
++DDA + D M G
Sbjct: 908 SGRLDDAHEMFDGMVHYG 925
Score = 56.2 bits (134), Expect = 5e-06
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ E+ S G P+ T+N LI A + G + E DL +M+ GC P++ TYN+++ VK
Sbjct: 813 FEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVK 872
Query: 100 RNKIDDAIPL 71
N++D A+ L
Sbjct: 873 SNRLDKAMDL 882
>gb|EYU40948.1| hypothetical protein MIMGU_mgv1a018622mg, partial [Mimulus
guttatus]
Length = 145
Score = 85.9 bits (211), Expect(2) = 1e-16
Identities = 39/76 (51%), Positives = 58/76 (76%)
Frame = -3
Query: 277 NELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKR 98
NEL SKG+QP+ I+IG+LC+EG ++EAK+LLV+M SGC+PDS YN ++ G +K+
Sbjct: 70 NELPSKGLQPDCQAHTIVIGSLCREGCVDEAKNLLVKMERSGCAPDSVMYNNIIQGLLKK 129
Query: 97 NKIDDAIPLLDEMERR 50
N++ AIP L++M +R
Sbjct: 130 NEVSKAIPFLEDMHKR 145
Score = 25.8 bits (55), Expect(2) = 1e-16
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 335 IVTYTILIEGLCSDKKL 285
I+TY ILI GLC D ++
Sbjct: 46 IITYGILINGLCKDGEI 62
>dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 75.5 bits (184), Expect(2) = 2e-16
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
YNE+ ++G+ P+ +T+N LI C+E L EA + MV GC PD TY+IL+ Y K
Sbjct: 367 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 426
Query: 100 RNKIDDAIPLLDEMERRGLI 41
++DD + L E+ +GLI
Sbjct: 427 AKRVDDGMRLFREISSKGLI 446
Score = 35.4 bits (80), Expect(2) = 2e-16
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
ME +G+ D+VTY+ LI GLC+D K D
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWD 326
Score = 65.5 bits (158), Expect(2) = 9e-14
Identities = 29/90 (32%), Positives = 51/90 (56%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ E+ SKG+ PN +T+N L+ CQ G L AK+L +MV G P TY IL+ G
Sbjct: 437 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 496
Query: 100 RNKIDDAIPLLDEMERRGLILHPGALKMLL 11
+++ A+ + ++M++ + L G +++
Sbjct: 497 NGELNKALEIFEKMQKSRMTLGIGIYNIII 526
Score = 36.6 bits (83), Expect(2) = 9e-14
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -2
Query: 368 DVMENEGVNPDIVTYTILIEGLCSDKKLD 282
D+M ++G PDIVTY+ILI C K++D
Sbjct: 403 DLMVSKGCEPDIVTYSILINSYCKAKRVD 431
Score = 76.3 bits (186), Expect(2) = 8e-13
Identities = 35/90 (38%), Positives = 59/90 (65%)
Frame = -3
Query: 271 LGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNK 92
L KGV+P+VVT+N++IG LC++G+L EA L +M + GC+PD TYNIL+ ++ +
Sbjct: 545 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 604
Query: 91 IDDAIPLLDEMERRGLILHPGALKMLLPHL 2
+ ++ L++EM+ G +KM++ L
Sbjct: 605 LISSVELIEEMKVCGFSADSSTIKMVIDML 634
Score = 22.7 bits (47), Expect(2) = 8e-13
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
M+ + I Y I+I G+C+ K+D
Sbjct: 510 MQKSRMTLGIGIYNIIIHGMCNASKVD 536
Score = 60.5 bits (145), Expect(2) = 1e-09
Identities = 28/79 (35%), Positives = 49/79 (62%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+NE+ KG++ +VVT++ LIG LC +G ++ +L +M+ PD T++ L+ +VK
Sbjct: 297 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 356
Query: 100 RNKIDDAIPLLDEMERRGL 44
K+ +A L +EM RG+
Sbjct: 357 EGKLLEAKELYNEMITRGI 375
Score = 27.7 bits (60), Expect(2) = 1e-09
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
ME + +V Y+I+I+ LC D D
Sbjct: 265 MEERNIKASVVQYSIVIDSLCKDGSFD 291
Score = 58.9 bits (141), Expect(2) = 1e-08
Identities = 28/79 (35%), Positives = 46/79 (58%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ E+ S+GV P+VVT+ IL+ LC G L +A ++ +M S + G YNI++ G
Sbjct: 472 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 531
Query: 100 RNKIDDAIPLLDEMERRGL 44
+K+DDA L + +G+
Sbjct: 532 ASKVDDAWSLFCSLSDKGV 550
Score = 25.8 bits (55), Expect(2) = 1e-08
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
+ ++G+ P+ +TY L+ G C KL+
Sbjct: 440 ISSKGLIPNTITYNTLVLGFCQSGKLN 466
Score = 54.3 bits (129), Expect(2) = 4e-08
Identities = 26/74 (35%), Positives = 45/74 (60%)
Frame = -3
Query: 265 SKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKID 86
SKG +P++VT++ILI + C+ +++ L ++ G P++ TYN LV G+ + K++
Sbjct: 407 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 466
Query: 85 DAIPLLDEMERRGL 44
A L EM RG+
Sbjct: 467 AAKELFQEMVSRGV 480
Score = 28.5 bits (62), Expect(2) = 4e-08
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKL 285
M G+ PD +TY LI+G C + L
Sbjct: 370 MITRGIAPDTITYNSLIDGFCKENCL 395
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
E+ + + P+VVTF+ LI +EG L EAK+L +M+ G +PD+ TYN L+ G+ K N
Sbjct: 334 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393
Query: 94 KIDDAIPLLDEMERRG 47
+ +A + D M +G
Sbjct: 394 CLHEANQMFDLMVSKG 409
Score = 52.8 bits (125), Expect(2) = 8e-06
Identities = 25/80 (31%), Positives = 46/80 (57%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ ++ + ++ +VV ++I+I +LC++G+ ++A L +M G D TY+ L+GG
Sbjct: 262 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 321
Query: 100 RNKIDDAIPLLDEMERRGLI 41
K DD +L EM R +I
Sbjct: 322 DGKWDDGAKMLREMIGRNII 341
Score = 22.3 bits (46), Expect(2) = 8e-06
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLC 300
+D M G PD VTY ++ LC
Sbjct: 227 IDRMVEYGFQPDEVTYGPVLNRLC 250
>ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis
thaliana] gi|51968798|dbj|BAD43091.1| hypothetical
protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 75.5 bits (184), Expect(2) = 2e-16
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
YNE+ ++G+ P+ +T+N LI C+E L EA + MV GC PD TY+IL+ Y K
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Query: 100 RNKIDDAIPLLDEMERRGLI 41
++DD + L E+ +GLI
Sbjct: 398 AKRVDDGMRLFREISSKGLI 417
Score = 35.4 bits (80), Expect(2) = 2e-16
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
ME +G+ D+VTY+ LI GLC+D K D
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWD 297
Score = 65.5 bits (158), Expect(2) = 9e-14
Identities = 29/90 (32%), Positives = 51/90 (56%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ E+ SKG+ PN +T+N L+ CQ G L AK+L +MV G P TY IL+ G
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 100 RNKIDDAIPLLDEMERRGLILHPGALKMLL 11
+++ A+ + ++M++ + L G +++
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Score = 36.6 bits (83), Expect(2) = 9e-14
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -2
Query: 368 DVMENEGVNPDIVTYTILIEGLCSDKKLD 282
D+M ++G PDIVTY+ILI C K++D
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Score = 76.3 bits (186), Expect(2) = 8e-13
Identities = 35/90 (38%), Positives = 59/90 (65%)
Frame = -3
Query: 271 LGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNK 92
L KGV+P+VVT+N++IG LC++G+L EA L +M + GC+PD TYNIL+ ++ +
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 91 IDDAIPLLDEMERRGLILHPGALKMLLPHL 2
+ ++ L++EM+ G +KM++ L
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 22.7 bits (47), Expect(2) = 8e-13
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
M+ + I Y I+I G+C+ K+D
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVD 507
Score = 60.5 bits (145), Expect(2) = 1e-09
Identities = 28/79 (35%), Positives = 49/79 (62%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+NE+ KG++ +VVT++ LIG LC +G ++ +L +M+ PD T++ L+ +VK
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 100 RNKIDDAIPLLDEMERRGL 44
K+ +A L +EM RG+
Sbjct: 328 EGKLLEAKELYNEMITRGI 346
Score = 27.7 bits (60), Expect(2) = 1e-09
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
ME + +V Y+I+I+ LC D D
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFD 262
Score = 58.9 bits (141), Expect(2) = 1e-08
Identities = 28/79 (35%), Positives = 46/79 (58%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ E+ S+GV P+VVT+ IL+ LC G L +A ++ +M S + G YNI++ G
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 100 RNKIDDAIPLLDEMERRGL 44
+K+DDA L + +G+
Sbjct: 503 ASKVDDAWSLFCSLSDKGV 521
Score = 25.8 bits (55), Expect(2) = 1e-08
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
+ ++G+ P+ +TY L+ G C KL+
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLN 437
Score = 54.3 bits (129), Expect(2) = 4e-08
Identities = 26/74 (35%), Positives = 45/74 (60%)
Frame = -3
Query: 265 SKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKID 86
SKG +P++VT++ILI + C+ +++ L ++ G P++ TYN LV G+ + K++
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 85 DAIPLLDEMERRGL 44
A L EM RG+
Sbjct: 438 AAKELFQEMVSRGV 451
Score = 28.5 bits (62), Expect(2) = 4e-08
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKL 285
M G+ PD +TY LI+G C + L
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCL 366
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/76 (39%), Positives = 47/76 (61%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
E+ + + P+VVTF+ LI +EG L EAK+L +M+ G +PD+ TYN L+ G+ K N
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 94 KIDDAIPLLDEMERRG 47
+ +A + D M +G
Sbjct: 365 CLHEANQMFDLMVSKG 380
Score = 52.8 bits (125), Expect(2) = 8e-06
Identities = 25/80 (31%), Positives = 46/80 (57%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ ++ + ++ +VV ++I+I +LC++G+ ++A L +M G D TY+ L+GG
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 100 RNKIDDAIPLLDEMERRGLI 41
K DD +L EM R +I
Sbjct: 293 DGKWDDGAKMLREMIGRNII 312
Score = 22.3 bits (46), Expect(2) = 8e-06
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLC 300
+D M G PD VTY ++ LC
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLC 221
>gb|EYU45465.1| hypothetical protein MIMGU_mgv1a003559mg [Mimulus guttatus]
Length = 578
Score = 70.9 bits (172), Expect(2) = 2e-16
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
E+ KG P+VVTFNILI LC++G L A D+L +M GC+P+S +YN L+ G+ K
Sbjct: 314 EMLRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCTPNSLSYNPLLHGFCKEK 373
Query: 94 KIDDAIPLLDEMERRG 47
K+D AI L+ M RG
Sbjct: 374 KMDRAIEYLEVMVTRG 389
Score = 40.0 bits (92), Expect(2) = 2e-16
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
LD M ++G PD+VTY +LI G+C + +LD
Sbjct: 265 LDEMRDKGCKPDVVTYNVLINGICKEGRLD 294
Score = 62.8 bits (151), Expect(2) = 3e-13
Identities = 30/78 (38%), Positives = 46/78 (58%)
Frame = -3
Query: 277 NELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKR 98
N+L SKG P ++T+N +I L + G E A LL +M + G PD TY+ LVGG +
Sbjct: 418 NQLSSKGCSPVLITYNTVIDGLSKMGKTERAMQLLFEMRERGLRPDIITYSSLVGGLSRE 477
Query: 97 NKIDDAIPLLDEMERRGL 44
K+++AI ++E G+
Sbjct: 478 GKVEEAIDFFQDLEGMGV 495
Score = 37.7 bits (86), Expect(2) = 3e-13
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLDI 279
L+VM G PDIVTY L+ LC D K+DI
Sbjct: 382 LEVMVTRGCYPDIVTYNTLLTALCKDGKVDI 412
Score = 65.9 bits (159), Expect(2) = 5e-12
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 12/84 (14%)
Frame = -3
Query: 262 KGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDD 83
K P+V+T+ ILI A C+E +E+A LL +M D GC PD TYN+L+ G K ++D+
Sbjct: 236 KECYPDVITYTILIEATCKESGVEQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDE 295
Query: 82 AI------------PLLDEMERRG 47
AI LL EM R+G
Sbjct: 296 AIIMCSTGRWMDAEKLLAEMLRKG 319
Score = 30.4 bits (67), Expect(2) = 5e-12
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKL 285
L V+E V PD+VTY ++ LC KL
Sbjct: 195 LKVLERMSVAPDVVTYNTILRTLCDSGKL 223
Score = 65.9 bits (159), Expect(2) = 6e-12
Identities = 31/74 (41%), Positives = 48/74 (64%)
Frame = -3
Query: 265 SKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKID 86
++G P++VT+N L+ ALC++G ++ A ++L Q+ GCSP TYN ++ G K K +
Sbjct: 387 TRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLSSKGCSPVLITYNTVIDGLSKMGKTE 446
Query: 85 DAIPLLDEMERRGL 44
A+ LL EM RGL
Sbjct: 447 RAMQLLFEMRERGL 460
Score = 30.0 bits (66), Expect(2) = 6e-12
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
L+ M G P+ ++Y L+ G C +KK+D
Sbjct: 347 LEKMPKHGCTPNSLSYNPLLHGFCKEKKMD 376
Score = 65.1 bits (157), Expect(2) = 1e-11
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 12/89 (13%)
Frame = -3
Query: 277 NELGSKGVQPNVVTFNILIGALCQEGNLEEA------------KDLLVQMVDSGCSPDSG 134
+E+ KG +P+VVT+N+LI +C+EG L+EA + LL +M+ GCSP
Sbjct: 266 DEMRDKGCKPDVVTYNVLINGICKEGRLDEAIIMCSTGRWMDAEKLLAEMLRKGCSPSVV 325
Query: 133 TYNILVGGYVKRNKIDDAIPLLDEMERRG 47
T+NIL+ ++ + AI +L++M + G
Sbjct: 326 TFNILINFLCRKGLLGRAIDILEKMPKHG 354
Score = 29.6 bits (65), Expect(2) = 1e-11
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
LD + PD++TYTILIE C + ++
Sbjct: 230 LDQQLQKECYPDVITYTILIEATCKESGVE 259
Score = 60.8 bits (146), Expect(2) = 2e-11
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = -3
Query: 256 VQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDDAI 77
V P+VVT+N ++ LC G L++A ++L Q + C PD TY IL+ K + ++ A+
Sbjct: 203 VAPDVVTYNTILRTLCDSGKLKQAMEVLDQQLQKECYPDVITYTILIEATCKESGVEQAM 262
Query: 76 PLLDEMERRG 47
LLDEM +G
Sbjct: 263 KLLDEMRDKG 272
Score = 33.5 bits (75), Expect(2) = 2e-11
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKL 285
++++E+ G PD++TY +LI G C ++
Sbjct: 163 MEILEDSGAVPDVITYNVLISGYCKSGEI 191
Score = 59.7 bits (143), Expect(2) = 7e-10
Identities = 29/90 (32%), Positives = 49/90 (54%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ +L GV+PN V +N ++ LC+ + A + LV MV GC P TY IL+ G
Sbjct: 487 FQDLEGMGVRPNSVIYNAIMLGLCKARKTDRAINFLVHMVSKGCKPTESTYTILIEGLAY 546
Query: 100 RNKIDDAIPLLDEMERRGLILHPGALKMLL 11
+A+ LL+E+ RG++ A ++++
Sbjct: 547 EGFTKEALELLNELCSRGVVKKSSAEQVVV 576
Score = 29.3 bits (64), Expect(2) = 7e-10
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
M G+ PDI+TY+ L+ GL + K++
Sbjct: 455 MRERGLRPDIITYSSLVGGLSREGKVE 481
Score = 56.2 bits (134), Expect(2) = 3e-07
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
E+ +G++P+++T++ L+G L +EG +EEA D + G P+S YN ++ G K
Sbjct: 454 EMRERGLRPDIITYSSLVGGLSREGKVEEAIDFFQDLEGMGVRPNSVIYNAIMLGLCKAR 513
Query: 94 KIDDAIPLLDEMERRG 47
K D AI L M +G
Sbjct: 514 KTDRAINFLVHMVSKG 529
Score = 23.9 bits (50), Expect(2) = 3e-07
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGL 303
L+ + ++G +P ++TY +I+GL
Sbjct: 417 LNQLSSKGCSPVLITYNTVIDGL 439
Score = 54.7 bits (130), Expect(2) = 4e-07
Identities = 25/71 (35%), Positives = 41/71 (57%)
Frame = -3
Query: 259 GVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDDA 80
G PN +++N L+ C+E ++ A + L MV GC PD TYN L+ K K+D A
Sbjct: 354 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLEVMVTRGCYPDIVTYNTLLTALCKDGKVDIA 413
Query: 79 IPLLDEMERRG 47
+ +L+++ +G
Sbjct: 414 VEILNQLSSKG 424
Score = 25.0 bits (53), Expect(2) = 4e-07
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLC 300
M +G +P +VT+ ILI LC
Sbjct: 315 MLRKGCSPSVVTFNILINFLC 335
>ref|XP_004296039.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 558
Score = 80.5 bits (197), Expect(2) = 3e-16
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = -3
Query: 295 IKSLT--YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNI 122
+KS T ++ L SKGV P+V T+N++I LC G L EA+ LL +M GCSPD TYNI
Sbjct: 462 LKSATDFFSSLSSKGVVPDVWTYNVMINGLCNGGLLVEAEKLLREMEAKGCSPDGCTYNI 521
Query: 121 LVGGYVKRNKIDDAIPLLDEMERRGLI 41
++ G++ N+I A+ L++EM+ G++
Sbjct: 522 IIRGFINNNEISRAVQLIEEMKGDGVL 548
Score = 30.0 bits (66), Expect(2) = 3e-16
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = -2
Query: 350 GVNPDIVTYTILIEGLCSDKKL 285
G+ P++ TY IL++GLCS ++L
Sbjct: 406 GLLPNVQTYAILLDGLCSSQQL 427
Score = 60.1 bits (144), Expect(2) = 4e-10
Identities = 28/88 (31%), Positives = 54/88 (61%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
E+ S+ + PNVVT+++L+ LC+EG + EA ++ M+ P++ TYN L+ GY R
Sbjct: 261 EMASRNIYPNVVTYSVLVDGLCKEGKVVEANSVVEIMIRKDIEPNAITYNSLMDGYCLRG 320
Query: 94 KIDDAIPLLDEMERRGLILHPGALKMLL 11
++ +A + D M +G +++ + +L+
Sbjct: 321 EMGEARKVFDLMLGKGGMVNVFSCNILI 348
Score = 29.6 bits (65), Expect(2) = 4e-10
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCS 297
M + G+ P++VTYT LI+G C+
Sbjct: 227 MISRGIAPNVVTYTSLIQGACN 248
Score = 51.6 bits (122), Expect(2) = 3e-08
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = -3
Query: 262 KGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDD 83
K ++PN +T+N L+ C G + EA+ + M+ G + + NIL+ GY K KID
Sbjct: 300 KDIEPNAITYNSLMDGYCLRGEMGEARKVFDLMLGKGGMVNVFSCNILINGYSKHKKIDQ 359
Query: 82 AIPLLDEMER 53
A + +EM R
Sbjct: 360 ANEVFEEMFR 369
Score = 32.0 bits (71), Expect(2) = 3e-08
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKL 285
M + + P++VTY++L++GLC + K+
Sbjct: 262 MASRNIYPNVVTYSVLVDGLCKEGKV 287
Score = 60.1 bits (144), Expect = 3e-07
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = -3
Query: 310 RDFAVIKSLT-YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSG 134
+D V+ ++ ++E+ S+G+ PNVVT+ LI C G EEA LL +M P+
Sbjct: 213 KDTLVVDAMNLFSEMISRGIAPNVVTYTSLIQGACNTGQFEEATKLLYEMASRNIYPNVV 272
Query: 133 TYNILVGGYVKRNKIDDAIPLLDEMERRGL 44
TY++LV G K K+ +A +++ M R+ +
Sbjct: 273 TYSVLVDGLCKEGKVVEANSVVEIMIRKDI 302
>ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 68.2 bits (165), Expect(2) = 1e-15
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+NE+ G P+VVT+ ILI ALC+ G+++ A D+L M G P+ TYN ++ G +K
Sbjct: 363 WNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLK 422
Query: 100 RNKIDDAIPLLDEMERRGL 44
++D+A+ LL+ ME G+
Sbjct: 423 ARRLDEALELLENMESLGV 441
Score = 40.0 bits (92), Expect(2) = 1e-15
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
M++EG PD++TYT+LI+ LC+ KLD
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLD 322
Score = 58.2 bits (139), Expect(2) = 1e-09
Identities = 28/79 (35%), Positives = 44/79 (55%)
Frame = -3
Query: 283 TYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYV 104
T+ + +G+ P++ N + L + G + EA+D+ + G SPDS TYN+L+ Y
Sbjct: 467 TFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYS 526
Query: 103 KRNKIDDAIPLLDEMERRG 47
K +ID A LL EM +G
Sbjct: 527 KAGQIDKATQLLSEMISKG 545
Score = 30.0 bits (66), Expect(2) = 1e-09
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
LDVM +G+ P++ TY +I GL ++LD
Sbjct: 398 LDVMTTKGIFPNLHTYNTMICGLLKARRLD 427
Score = 52.0 bits (123), Expect(2) = 9e-09
Identities = 27/79 (34%), Positives = 44/79 (55%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ EL G+ P+ V++N +I L + L+EA L +M + G SPD TYN L+
Sbjct: 994 FEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGI 1053
Query: 100 RNKIDDAIPLLDEMERRGL 44
K+D A+ + +E++ GL
Sbjct: 1054 AGKVDVAVKMYEELQLVGL 1072
Score = 33.1 bits (74), Expect(2) = 9e-09
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
M EG+ PD+ +YTIL+E LC ++D
Sbjct: 962 MVKEGIRPDLKSYTILVECLCITGRID 988
Score = 55.1 bits (131), Expect(2) = 4e-08
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ E+ +G P+V+T+ +LI ALC G L++AK+L V+M S SPD TY L+ + K
Sbjct: 293 FKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGK 352
Query: 100 RNKIDDAIPLLDEMERRG 47
++ +EME G
Sbjct: 353 VGDLETVKRFWNEMEVDG 370
Score = 27.7 bits (60), Expect(2) = 4e-08
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
L+ M++ G+ P+I TYTI I L +++D
Sbjct: 258 LEEMKSIGLRPNIYTYTICIRALGRARRID 287
Score = 45.8 bits (107), Expect(2) = 6e-08
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = -3
Query: 265 SKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKID 86
+KG+ PN+ T+N +I L + L+EA +LL M G P + +Y + + Y K
Sbjct: 403 TKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPA 462
Query: 85 DAIPLLDEMERRGLI 41
AI + M++RG++
Sbjct: 463 KAIDTFETMKKRGIM 477
Score = 36.6 bits (83), Expect(2) = 6e-08
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
ME +G PD+VTYTILIE LC +D
Sbjct: 366 MEVDGYAPDVVTYTILIEALCKSGDVD 392
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/74 (36%), Positives = 45/74 (60%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
Y+E+ S+G +PN +T NI+I AL + NL +A DL +++ SP TY L+ G +K
Sbjct: 854 YSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLK 913
Query: 100 RNKIDDAIPLLDEM 59
+ + A+ + +EM
Sbjct: 914 AGRSEQAMKIFEEM 927
Score = 59.7 bits (143), Expect = 4e-07
Identities = 26/93 (27%), Positives = 53/93 (56%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ ++ +G++P++ ++ IL+ LC G ++EA ++ +G PD+ +YN ++ G K
Sbjct: 959 FKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGK 1018
Query: 100 RNKIDDAIPLLDEMERRGLILHPGALKMLLPHL 2
++D+A+ L EM+ RG+ L+ HL
Sbjct: 1019 SRRLDEALSLFSEMKNRGISPDLYTYNALILHL 1051
>ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 873
Score = 82.0 bits (201), Expect(2) = 2e-15
Identities = 40/88 (45%), Positives = 59/88 (67%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
E+ ++GV+ N VT NI+I C EG ++EA +++V+MV+SG SPD TYN ++ GY K
Sbjct: 376 EMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAG 435
Query: 94 KIDDAIPLLDEMERRGLILHPGALKMLL 11
K+ +A ++DEM R+GL L L LL
Sbjct: 436 KMAEAYKMMDEMGRKGLKLDTFTLNTLL 463
Score = 25.8 bits (55), Expect(2) = 2e-15
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 368 DVMENEGVNPDIVTYTILIEG 306
D ME+ + PD+VTY LI+G
Sbjct: 340 DKMESFKLVPDVVTYNTLIDG 360
Score = 67.4 bits (163), Expect(2) = 5e-12
Identities = 31/79 (39%), Positives = 51/79 (64%)
Frame = -3
Query: 277 NELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKR 98
N++G G P+ VT+N ++ ALC+ L + +DLL+QM +SG P+ TYNILV GY K
Sbjct: 235 NQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKL 294
Query: 97 NKIDDAIPLLDEMERRGLI 41
+ +A +++ M +G++
Sbjct: 295 KWLKEAAEVIELMTGKGML 313
Score = 28.9 bits (63), Expect(2) = 5e-12
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 350 GVNPDIVTYTILIEGLCSDKKLD 282
GV P++ T+ ILI G CSD +
Sbjct: 206 GVQPNVNTFNILIHGYCSDNNTE 228
Score = 60.5 bits (145), Expect(2) = 2e-09
Identities = 27/79 (34%), Positives = 47/79 (59%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+N++ ++P++ T NIL+ LC+EG LE+ L + G D+ TYNI++ + K
Sbjct: 584 HNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCK 643
Query: 100 RNKIDDAIPLLDEMERRGL 44
+++DA L+ EME + L
Sbjct: 644 ERRLEDAFDLMTEMEGKNL 662
Score = 26.9 bits (58), Expect(2) = 2e-09
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
M+ G+ I+TY +I GLC K D
Sbjct: 517 MKETGIVATIITYNTIIRGLCLSGKTD 543
Score = 67.0 bits (162), Expect = 3e-09
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = -3
Query: 259 GVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDDA 80
GVQPNV TFNILI C + N EEA L+ QM + GC PD+ TYN ++ KR+++
Sbjct: 206 GVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQV 265
Query: 79 IPLLDEMERRGLILHPGALKMLL 11
LL +M+ GL + +L+
Sbjct: 266 RDLLLQMKNSGLFPNRNTYNILV 288
Score = 55.1 bits (131), Expect(2) = 1e-07
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = -3
Query: 262 KGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDD 83
KG+ P+V T+N ++ LC EG ++EA L +M PD TYN L+ G + D
Sbjct: 310 KGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDA 369
Query: 82 AIPLLDEMERRGL 44
A L++EM+ RG+
Sbjct: 370 AFKLVEEMKARGV 382
Score = 26.6 bits (57), Expect(2) = 1e-07
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKL 285
M+N G+ P+ TY IL+ G C K L
Sbjct: 272 MKNSGLFPNRNTYNILVHGYCKLKWL 297
Score = 52.0 bits (123), Expect(2) = 2e-06
Identities = 26/79 (32%), Positives = 44/79 (55%)
Frame = -3
Query: 277 NELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKR 98
+E+G KG++ + T N L+ +C E L++A L ++ G D TY L+ GY K
Sbjct: 445 DEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKD 504
Query: 97 NKIDDAIPLLDEMERRGLI 41
+ D A+ L +EM+ G++
Sbjct: 505 EQADRALKLWEEMKETGIV 523
Score = 25.4 bits (54), Expect(2) = 2e-06
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKL 285
M G +PD TY +I G C K+
Sbjct: 412 MVESGFSPDCFTYNTMINGYCKAGKM 437
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = -3
Query: 310 RDFAVIKSLT-YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSG 134
R+ + K LT +N SKG + VT+NI+I + C+E LE+A DL+ +M PD
Sbjct: 608 REGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRY 667
Query: 133 TYNILVGGYVKRNKIDDAIPLLDEMERRG 47
TYN +V G K + ++A L + +G
Sbjct: 668 TYNAIVTGLTKAGRTEEAEKLALKFAEKG 696
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/78 (37%), Positives = 45/78 (57%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
++ + G+ PN T+NIL+ C+ L+EA +++ M G PD TYN +V G
Sbjct: 271 QMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330
Query: 94 KIDDAIPLLDEMERRGLI 41
KID+A+ L D+ME L+
Sbjct: 331 KIDEAVRLRDKMESFKLV 348
>ref|XP_006292855.1| hypothetical protein CARUB_v10019115mg [Capsella rubella]
gi|482561562|gb|EOA25753.1| hypothetical protein
CARUB_v10019115mg [Capsella rubella]
Length = 754
Score = 79.0 bits (193), Expect(2) = 2e-15
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
++E+ SKG +P+ T+N+LI +LC +G L+EA D+L QM SGC+ TYN L+ G+ K
Sbjct: 423 FDEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALDMLKQMESSGCARSVITYNTLIDGFCK 482
Query: 100 RNKIDDAIPLLDEMERRGL 44
NKI +A + DEME G+
Sbjct: 483 ANKIREAEEIFDEMEVHGV 501
Score = 28.9 bits (63), Expect(2) = 2e-15
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2
Query: 365 VMENEGVNPDIVTYTILIEGLC 300
V+ ++G+ PD+ T+ LI+GLC
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLC 411
Score = 66.2 bits (160), Expect(2) = 7e-11
Identities = 32/75 (42%), Positives = 44/75 (58%)
Frame = -3
Query: 271 LGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNK 92
L SKG+ P+V TFN LI LC N A +L +M GC PD TYN+L+ + K
Sbjct: 391 LTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFDEMRSKGCEPDEFTYNMLIDSLCSKGK 450
Query: 91 IDDAIPLLDEMERRG 47
+D+A+ +L +ME G
Sbjct: 451 LDEALDMLKQMESSG 465
Score = 26.2 bits (56), Expect(2) = 7e-11
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
LD M +P+ VTY LI LC + +++
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Score = 59.3 bits (142), Expect(2) = 2e-10
Identities = 27/87 (31%), Positives = 50/87 (57%)
Frame = -3
Query: 262 KGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDD 83
+G +P+ T+N L+ C+ G++++A D++ M +GC PD TY L+ G K +++
Sbjct: 534 EGQKPDKFTYNSLLTHFCRGGDIKKAADIVQTMTSNGCEPDIVTYGTLISGLCKAGRVEV 593
Query: 82 AIPLLDEMERRGLILHPGALKMLLPHL 2
A LL ++ +G+ L P A ++ L
Sbjct: 594 ASKLLRSIQMKGIALTPHAYNPVIQAL 620
Score = 56.6 bits (135), Expect(2) = 2e-10
Identities = 26/76 (34%), Positives = 44/76 (57%)
Frame = -3
Query: 274 ELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRN 95
++ S G +V+T+N LI C+ + EA+++ +M G S +S TYN L+ G K
Sbjct: 460 QMESSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 94 KIDDAIPLLDEMERRG 47
+++DA L+D+M G
Sbjct: 520 RVEDAAQLMDQMIMEG 535
Score = 34.3 bits (77), Expect(2) = 2e-10
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -2
Query: 368 DVMENEGVNPDIVTYTILIEGLCSDKKLD 282
D M ++G PD TY +LI+ LCS KLD
Sbjct: 424 DEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Score = 31.6 bits (70), Expect(2) = 2e-10
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 368 DVMENEGVNPDIVTYTILIEGLCSDKKLD 282
D ME GV+ + VTY LI+GLC ++++
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Score = 53.5 bits (127), Expect(2) = 3e-09
Identities = 27/77 (35%), Positives = 41/77 (53%)
Frame = -3
Query: 277 NELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKR 98
+++ ++ PN VT+N LI LC+E +EEA +L + G PD T+N L+ G
Sbjct: 354 DQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 413
Query: 97 NKIDDAIPLLDEMERRG 47
A+ L DEM +G
Sbjct: 414 RNHRVAMELFDEMRSKG 430
Score = 33.1 bits (74), Expect(2) = 3e-09
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLC 300
+DVM EG +PD+ TY +I GLC
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLC 341
Score = 55.1 bits (131), Expect(2) = 1e-07
Identities = 25/80 (31%), Positives = 47/80 (58%)
Frame = -3
Query: 286 LTYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGY 107
L ++ S G+ P+ TF ++ +EG+L+ A + QMV+ GCS + + N++V G+
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVNGF 269
Query: 106 VKRNKIDDAIPLLDEMERRG 47
K +++DA+ + EM +G
Sbjct: 270 CKEGRVEDALNFIQEMSNQG 289
Score = 26.6 bits (57), Expect(2) = 1e-07
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 350 GVNPDIVTYTILIEGLCSDKKL 285
G+ PD+ T+ +LI+ LC +L
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQL 205
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/74 (35%), Positives = 47/74 (63%)
Frame = -3
Query: 262 KGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDD 83
+G P+V T+N +I LC+ G ++EA ++L QM+ CSP++ TYN L+ K N++++
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 82 AIPLLDEMERRGLI 41
A L + +G++
Sbjct: 384 ATELARVLTSKGIL 397
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/78 (34%), Positives = 41/78 (52%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
++E+ GV N VT+N LI LC+ +E+A L+ QM+ G PD TYN L+ + +
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKFTYNSLLTHFCR 552
Query: 100 RNKIDDAIPLLDEMERRG 47
I A ++ M G
Sbjct: 553 GGDIKKAADIVQTMTSNG 570
Score = 27.7 bits (60), Expect(2) = 3e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKL 285
L ME+ G ++TY LI+G C K+
Sbjct: 458 LKQMESSGCARSVITYNTLIDGFCKANKI 486
>ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata] gi|297315145|gb|EFH45568.1| hypothetical protein
ARALYDRAFT_491552 [Arabidopsis lyrata subsp. lyrata]
Length = 1114
Score = 65.5 bits (158), Expect(2) = 2e-15
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
++E+ G P+VVTF IL+ ALC+ GN EA L M D G P+ TYN L+ G ++
Sbjct: 353 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLR 412
Query: 100 RNKIDDAIPLLDEMERRGL 44
+++DDA+ + D ME G+
Sbjct: 413 VHRLDDALEIFDNMESLGV 431
Score = 42.0 bits (97), Expect(2) = 2e-15
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
M++EG PD+VTYT+LI+ LC+ +KLD
Sbjct: 286 MDDEGCGPDVVTYTVLIDALCTARKLD 312
Score = 60.8 bits (146), Expect(2) = 2e-10
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = -3
Query: 283 TYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYV 104
T+ ++ +KG+ PN+V N + +L + G EAK + + D G PDS TYN+++ Y
Sbjct: 457 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 516
Query: 103 KRNKIDDAIPLLDEM 59
K +ID+AI LL EM
Sbjct: 517 KVGEIDEAIKLLSEM 531
Score = 30.0 bits (66), Expect(2) = 2e-10
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
LDVM ++G+ P++ TY LI GL +LD
Sbjct: 388 LDVMRDQGILPNLHTYNTLICGLLRVHRLD 417
Score = 63.9 bits (154), Expect = 2e-08
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = -3
Query: 259 GVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDDA 80
GVQP + T+N+LIG L + +E A+D+ +Q+ ++GC PD TYN L+ Y K KID+
Sbjct: 782 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDEL 841
Query: 79 IPLLDEM 59
+ EM
Sbjct: 842 FEIYKEM 848
Score = 56.6 bits (135), Expect(2) = 1e-07
Identities = 29/81 (35%), Positives = 40/81 (49%)
Frame = -3
Query: 286 LTYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGY 107
L Y+ + + P T+ LI L + G L EAK L M D GC P+ YNIL+ G+
Sbjct: 879 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGF 938
Query: 106 VKRNKIDDAIPLLDEMERRGL 44
K + D A L M + G+
Sbjct: 939 GKAGEADAACALFKRMVKEGV 959
Score = 24.6 bits (52), Expect(2) = 1e-07
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
++N G PD+ TY L++ K+D
Sbjct: 813 VKNTGCIPDVATYNFLLDAYGKSGKID 839
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = -3
Query: 262 KGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKIDD 83
KG PN +TFN L LC+ + A +L +M+D GC PD TYN ++ G VK ++ +
Sbjct: 604 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 663
Query: 82 AIPLLDEMER 53
A+ +M++
Sbjct: 664 AMCFFHQMKK 673
Score = 56.2 bits (134), Expect = 5e-06
Identities = 23/80 (28%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ + +GV+P++ T+++L+ LC G ++E ++ +SG +PD YN+++ G K
Sbjct: 951 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGK 1010
Query: 100 RNKIDDAIPLLDEMER-RGL 44
+++++A+ L +EM++ RG+
Sbjct: 1011 FHRLEEALVLFNEMKKSRGI 1030
Score = 55.5 bits (132), Expect = 8e-06
Identities = 30/85 (35%), Positives = 46/85 (54%)
Frame = -3
Query: 310 RDFAVIKSLTYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGT 131
RD + L E+ + G++PNV TF I I L + G + EA ++L +M D GC PD T
Sbjct: 239 RDIESVMGLL-KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 297
Query: 130 YNILVGGYVKRNKIDDAIPLLDEME 56
Y +L+ K+D A + +M+
Sbjct: 298 YTVLIDALCTARKLDCAKEVFAKMK 322
>ref|XP_007011706.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508782069|gb|EOY29325.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 1112
Score = 70.9 bits (172), Expect(2) = 2e-15
Identities = 36/88 (40%), Positives = 55/88 (62%)
Frame = -3
Query: 307 DFAVIKSLTYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTY 128
D ++K +NE+ + G P+VVTF ILI A C+ GNL+EA D+L M + G P+ TY
Sbjct: 346 DIDLVKEF-WNEMEADGYAPDVVTFTILIEAFCKVGNLDEAFDMLEVMRNQGILPNLHTY 404
Query: 127 NILVGGYVKRNKIDDAIPLLDEMERRGL 44
N L+ G ++ N++D+A L +E G+
Sbjct: 405 NTLICGLLRVNRVDEAFELFTNLESLGI 432
Score = 36.6 bits (83), Expect(2) = 2e-15
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
M++ G PD+VTYT+LI+ LC+ +LD
Sbjct: 287 MDDLGCGPDVVTYTVLIDALCNTGRLD 313
Score = 60.1 bits (144), Expect(2) = 4e-10
Identities = 29/75 (38%), Positives = 48/75 (64%)
Frame = -3
Query: 283 TYNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYV 104
T+ ++ ++G+ PNV+ N + +L + G L EAK + + SG +PDS TYN+++ +
Sbjct: 458 TFEKMKARGIVPNVIACNASLYSLAEAGRLGEAKAIFNGLKSSGLAPDSVTYNMMMKCFS 517
Query: 103 KRNKIDDAIPLLDEM 59
K +ID+AI LL EM
Sbjct: 518 KVGQIDEAIKLLSEM 532
Score = 29.6 bits (65), Expect(2) = 4e-10
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 371 LDVMENEGVNPDIVTYTILIEGLCSDKKLD 282
L+VM N+G+ P++ TY LI GL ++D
Sbjct: 389 LEVMRNQGILPNLHTYNTLICGLLRVNRVD 418
Score = 63.5 bits (153), Expect = 3e-08
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ + G PN +TFN L+ LC+ + A +L +M+ CSPD TYN ++ G++K
Sbjct: 599 FGSMTRHGCSPNTITFNTLLDCLCKNDEVVLALKMLYKMMTRNCSPDVRTYNTVIYGFIK 658
Query: 100 RNKIDDAIPLLDEMERRGLILHPG--ALKMLLP 8
N++ DAI + +M++ +L+P L LLP
Sbjct: 659 ENRVKDAIWVFHQMKK---VLYPDYVTLCTLLP 688
Score = 50.1 bits (118), Expect(2) = 2e-07
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ EL G+ P++V++N++I L + G +EEA L +M G SPD TYN L+
Sbjct: 985 FEELKLTGLDPDLVSYNLMINGLGRSGRVEEALSLFDEMWSRGISPDLYTYNSLILNLGT 1044
Query: 100 RNKIDDAIPLLDEMERRGL 44
++ A +E++ GL
Sbjct: 1045 VGMVEQAGKFYEELQLMGL 1063
Score = 30.8 bits (68), Expect(2) = 2e-07
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
M EG+ PD+ +YTIL++ LC ++D
Sbjct: 953 MVKEGIRPDLKSYTILVDCLCLVGRVD 979
Score = 59.7 bits (143), Expect = 4e-07
Identities = 32/79 (40%), Positives = 41/79 (51%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
Y +L S P T+ LI L + G LEEAK L +MVD GC + YNIL+ GY K
Sbjct: 880 YYDLISGDFSPTPCTYGPLIDGLLKLGRLEEAKQLFEEMVDYGCKANCAIYNILMNGYGK 939
Query: 100 RNKIDDAIPLLDEMERRGL 44
+D A L M + G+
Sbjct: 940 TGDVDAACELFKRMVKEGI 958
Score = 44.3 bits (103), Expect(2) = 8e-07
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = -3
Query: 265 SKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVKRNKID 86
++G+ PN+ T+N LI L + ++EA +L + G P + TY + + Y K
Sbjct: 394 NQGILPNLHTYNTLICGLLRVNRVDEAFELFTNLESLGIKPTAYTYILFINYYGKSGDHG 453
Query: 85 DAIPLLDEMERRGLI 41
A+ ++M+ RG++
Sbjct: 454 KALETFEKMKARGIV 468
Score = 34.3 bits (77), Expect(2) = 8e-07
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2
Query: 362 MENEGVNPDIVTYTILIEGLCSDKKLD 282
ME +G PD+VT+TILIE C LD
Sbjct: 357 MEADGYAPDVVTFTILIEAFCKVGNLD 383
Score = 55.5 bits (132), Expect = 8e-06
Identities = 21/79 (26%), Positives = 48/79 (60%)
Frame = -3
Query: 280 YNELGSKGVQPNVVTFNILIGALCQEGNLEEAKDLLVQMVDSGCSPDSGTYNILVGGYVK 101
+ + +G++P++ ++ IL+ LC G +++A ++ +G PD +YN+++ G +
Sbjct: 950 FKRMVKEGIRPDLKSYTILVDCLCLVGRVDDAMHYFEELKLTGLDPDLVSYNLMINGLGR 1009
Query: 100 RNKIDDAIPLLDEMERRGL 44
++++A+ L DEM RG+
Sbjct: 1010 SGRVEEALSLFDEMWSRGI 1028