BLASTX nr result

ID: Mentha25_contig00010422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00010422
         (366 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247829.1| PREDICTED: uncharacterized protein LOC101256...    65   7e-09
ref|XP_006360333.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-...    65   1e-08
ref|XP_002283247.2| PREDICTED: uncharacterized protein LOC100247...    57   3e-06
emb|CAN82765.1| hypothetical protein VITISV_037878 [Vitis vinifera]    57   3e-06

>ref|XP_004247829.1| PREDICTED: uncharacterized protein LOC101256220 [Solanum
           lycopersicum]
          Length = 737

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 48/132 (36%), Positives = 63/132 (47%), Gaps = 22/132 (16%)
 Frame = -1

Query: 345 CRTFAMTRSVPLSFTSDTLLKRQRHG---SRHGECSTSVSDDXXXXXXXXXXXXXXV--- 184
           CR     R+ P      T+ KR + G   S HGECSTSVS D                  
Sbjct: 404 CRQINGHRTAP-----STVKKRLKQGPASSSHGECSTSVSKDVDIICLSSPESRVNTRST 458

Query: 183 --------NMPQIIEVDESSSQVRRD--------THDEDDRARQLEADALMALELQEQLY 52
                   ++  +I VD  SS +R +        + +ED RA Q++AD  +A ELQEQLY
Sbjct: 459 RNPSHVGTDVEPVIVVDSPSSTIRHEGSRVVCSSSRNEDARASQVDADERLARELQEQLY 518

Query: 51  NELPAFGVPEAD 16
           NE+P+FGV E D
Sbjct: 519 NEVPSFGVGEID 530


>ref|XP_006360333.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Solanum
           tuberosum]
          Length = 736

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 48/132 (36%), Positives = 62/132 (46%), Gaps = 22/132 (16%)
 Frame = -1

Query: 345 CRTFAMTRSVPLSFTSDTLLKRQRHG---SRHGECSTSVSDDXXXXXXXXXXXXXXVNMP 175
           CR     R+ P      T+ KR + G   S HGECSTSVS+D                  
Sbjct: 403 CRQINGHRTAP-----STVKKRLKQGPASSSHGECSTSVSNDVDIICLTSPESRVNTRST 457

Query: 174 Q-----------IIEVDESSSQVRRD--------THDEDDRARQLEADALMALELQEQLY 52
           +           +I VD  SS  R +        + +ED RA Q++AD  +A ELQEQLY
Sbjct: 458 RNPSHVGTGVEPVIVVDSPSSTTRHEGSRVACSSSRNEDARASQVDADERLARELQEQLY 517

Query: 51  NELPAFGVPEAD 16
           NE+P+FGV E D
Sbjct: 518 NEVPSFGVGEID 529


>ref|XP_002283247.2| PREDICTED: uncharacterized protein LOC100247656 [Vitis vinifera]
          Length = 363

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/112 (37%), Positives = 54/112 (48%), Gaps = 25/112 (22%)
 Frame = -1

Query: 291 LLKRQR-HGS---RHGECSTSVSDDXXXXXXXXXXXXXXVN------------MPQIIEV 160
           L+KRQR HGS     GE STSV +D                            M  +IE+
Sbjct: 35  LIKRQRKHGSATSNTGESSTSVFNDSEIMFLGSSGEPSNSGSTRSQSHHGQGVMEPVIEI 94

Query: 159 DESSSQVRR---------DTHDEDDRARQLEADALMALELQEQLYNELPAFG 31
           DE S ++R          +  D D RARQ+EAD ++A ELQEQLY+E+P  G
Sbjct: 95  DEQSPEIRHVASRNGGSMNNDDSDARARQIEADEILARELQEQLYHEMPVDG 146


>emb|CAN82765.1| hypothetical protein VITISV_037878 [Vitis vinifera]
          Length = 625

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/112 (37%), Positives = 54/112 (48%), Gaps = 25/112 (22%)
 Frame = -1

Query: 291 LLKRQR-HGS---RHGECSTSVSDDXXXXXXXXXXXXXXVN------------MPQIIEV 160
           L+KRQR HGS     GE STSV +D                            M  +IE+
Sbjct: 447 LIKRQRKHGSATSNTGESSTSVFNDSEIMFLGSSGEPSNSGSTRSQSHHGQGVMEPVIEI 506

Query: 159 DESSSQVRR---------DTHDEDDRARQLEADALMALELQEQLYNELPAFG 31
           DE S ++R          +  D D RARQ+EAD ++A ELQEQLY+E+P  G
Sbjct: 507 DEQSPEIRHVASRNGGSMNNDDSDARARQIEADEILARELQEQLYHEMPVDG 558


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