BLASTX nr result
ID: Mentha25_contig00009484
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Mentha25_contig00009484 (3026 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004935358.1| ORF1 gene product [Actinidia virus B] gi|356... 609 0.0 gb|ADE62745.1| replicase [Grapevine virus B] 615 0.0 gb|AFV34758.1| replicase [Grapevine virus B] 614 0.0 gb|ABU62819.1| replicase [Grapevine virus B] 612 0.0 gb|AET36885.1| putative replicase, partial [Actinidia virus A] 595 0.0 ref|NP_619654.1| putative replicase [Grapevine virus B] gi|10611... 583 0.0 gb|AFV73358.1| 195 kDa replicase [Grapevine virus A] 451 0.0 gb|ABH07008.1| putative replicase [Grapevine virus A] 452 0.0 gb|ABG37965.1| putative replicase [Grapevine virus A] 452 0.0 gb|ACA52189.1| 194 kDa protein [Grapevine virus A] 452 0.0 gb|ABL14358.1| 194 kDa protein [Grapevine virus A] 456 0.0 gb|AGT17853.1| putative replicase [Grapevine virus A] 455 0.0 gb|AAO84267.1| replicase [Grapevine virus A] 456 0.0 gb|ABH06983.2| 194 kDa protein [Grapevine virus A] 458 0.0 gb|ABH06996.2| replication-related protein [Grapevine virus A] 456 0.0 ref|NP_619662.1| putative replicase [Grapevine virus A] gi|81937... 449 0.0 gb|ABH06992.2| 194 kDa protein [Grapevine virus A] 457 0.0 gb|AAO17778.1| RNA-dependent RNA polymerase [Grapevine virus A] 452 0.0 gb|ABH06988.2| 194 kDa protein [Grapevine virus A] 460 0.0 ref|YP_006590065.1| replicase [Grapevine virus F] gi|401620150|g... 445 0.0 >ref|YP_004935358.1| ORF1 gene product [Actinidia virus B] gi|356711544|gb|AET36890.1| putative replicase [Actinidia virus B] Length = 1707 Score = 609 bits (1570), Expect(2) = 0.0 Identities = 337/668 (50%), Positives = 415/668 (62%), Gaps = 8/668 (1%) Frame = +1 Query: 16 PMV--PNDSFIGMRKFVRRTGLCTGVETLGLPWIYNPIERYESGFIDLSTLERELFG-KQ 186 PMV P D F MR+F+ R G G L + W +P R + G I E + G KQ Sbjct: 504 PMVFSPIDGFRSMRRFMIREGPIRGFSGLAIGWENDPNIRLKEGRITHEQYENIISGTKQ 563 Query: 187 VNKKERRNPGCEHWNVIEEHLDLPADIXXXXXXXXXXXXXXRRVQFYSRNSLSYEYNGGK 366 KK+ + + R+ FYSR+S Y Y GG Sbjct: 564 ATKKQMGQITKCPCGAELKRTKVEGGYIRSLIPGWTDQLQGRKAAFYSRHSEEYSYPGGS 623 Query: 367 HASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHADDEECYTNNAVVTLNLVGE 546 H ++GWP ++ + ++L L EDFDHCL QIY++GA I YHADDE CY +VVT+NL GE Sbjct: 624 HKTRGWPAEIERMRNELGLGEDFDHCLCQIYEKGAGIPYHADDETCYKEPSVVTVNLFGE 683 Query: 547 AEFSIKCPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKSLSKDRVSLTFRNGILGADQGS 726 A+F KC N E ++L G LTM +G QS+HKHSV++ RVSLTFRN I+ Sbjct: 684 ADFKTKCTN--ELSFRLTDGDVLTMGKGFQSNHKHSVQNTGPGRVSLTFRNSIISNQADE 741 Query: 727 DTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMGITREICMSIIHSKMPRAIEEIK 906 D LSEYEE FDE+L +L +N KNLCC+DRI+EHMG+ RE+C SIIHSKMPRAIEE K Sbjct: 742 DDLSEYEETEAGFDETLVVLEKNVKNLCCLDRIAEHMGVKREVCASIIHSKMPRAIEEFK 801 Query: 907 DGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRELVCHADDEHLSHYHGPKNMVNFE 1086 +GGMS+ST + ++K LD+A YIQN RG + G FREL A EH+S Y GP Sbjct: 802 EGGMSISTFIHVVKQLDLACYIQNERGNIQVPGKFRELKVSATGEHMSAYLGPTATSTLA 861 Query: 1087 NALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLNKFQKHKGSEDAPVGTGKER--- 1257 AL FN D+S ++ RA L+ SF EGFTGV LNK+QK P+GT + Sbjct: 862 TALDFNPDVSRLSIEVTQSRAIHLLESFREGFTGVNLNKYQKR------PLGTDIDNTLI 915 Query: 1258 -LFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMDWRNKVHKSIDVTTFESAFK 1434 ++ GFAGSGKSYYPQTLL DTLVIVPRKAL DW KV V TFESAF Sbjct: 916 DVYGLFGFAGSGKSYYPQTLLRCCNMKDTLVIVPRKALKADWSEKVKDGAIVRTFESAF- 974 Query: 1435 KGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPLQCNYYNKNDDLFLAPERVN 1614 G++ YENI++DEVGLLPPGY+DLV +FQYDT+L+LGDPLQ YYNK D LFL P + Sbjct: 975 NGRKGYENIIIDEVGLLPPGYIDLVHANFQYDTMLLLGDPLQSEYYNKGDSLFLEPISES 1034 Query: 1615 PFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTWNEKVGN-DMRIVASRKRKEI 1791 F L G YL+KTHRLP NQ LF+VPS GER E Y+ E N D+ I ASR KE Sbjct: 1035 VFDRLMGKKNYLYKTHRLPSNQKLFDVPSKGERSENYLKGAEGDANYDLIITASRAAKEK 1094 Query: 1792 EGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTRARKQLNIVVGKDLKEKLIR 1971 G STIGE+QGLS++R L+ID DW LL+D+ VMVA TRAR L++ V K +KE L Sbjct: 1095 RGQKGSTIGESQGLSVRRVKLVIDRDWGLLNDKAVMVALTRARNTLSVEVDKSMKEHLKV 1154 Query: 1972 HAKSGLLR 1995 HAKS +L+ Sbjct: 1155 HAKSSILK 1162 Score = 503 bits (1294), Expect(2) = 0.0 Identities = 246/341 (72%), Positives = 281/341 (82%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 DVELIEKE R ADSD+ME++L+GDPYLKGLL L +D +P++THL +S Sbjct: 1185 DVELIEKETRFADSDDMEDKLSGDPYLKGLLRLYDDVEMEEEEVPDVSLPEPQKTHLPIS 1244 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 NE++ LR + REA T AG T+QIDE+GYK E NPMTHKALYLHH+N DVATF Sbjct: 1245 TKENELAPSLLRAREHREARTPAGTTEQIDEMGYKMEPENPMTHKALYLHHRNSDVATFF 1304 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 LSVKKRLRF D EKN R++ K KGFGKQ+FK+L++TYNL P+ LP+LDR EAEF RKR+ Sbjct: 1305 LSVKKRLRFMDREKNHRRFNKVKGFGKQLFKVLKETYNLRQPDKLPDLDRIEAEFARKRL 1364 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 KS+NLIEKHSYRSDPDWPS+YLKIFLKQQVCTKMEKRGVDAKAGQTIACF HAVLC+FG Sbjct: 1365 NKSKNLIEKHSYRSDPDWPSHYLKIFLKQQVCTKMEKRGVDAKAGQTIACFCHAVLCKFG 1424 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LRRTEKALRAQLGDNV+IYSQ NYTDLD W + +V M+GTDSDYEAFDRSQDE+IL Sbjct: 1425 PLLRRTEKALRAQLGDNVLIYSQLNYTDLDKWCKNFVPSMLGTDSDYEAFDRSQDERILD 1484 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 FE+EVLKFFLWPEE+INEY LKLMMG SMG LA+MRFSGE Sbjct: 1485 FEMEVLKFFLWPEEVINEYKELKLMMGSSMGSLAVMRFSGE 1525 >gb|ADE62745.1| replicase [Grapevine virus B] Length = 1709 Score = 615 bits (1586), Expect(2) = 0.0 Identities = 317/670 (47%), Positives = 435/670 (64%), Gaps = 13/670 (1%) Frame = +1 Query: 25 PNDSFIGMRKFVRRTGLCTGVETLGLPWIYNPIERYESGFIDLSTLERELFGKQVNKKER 204 P D F +R+ + G+ L L W +P++R+ G ID L LFG ++ +R Sbjct: 507 PLDDFRALREPLTGRNGVIGMTCLLLTWEADPLKRFSMGLIDAKELNSALFGGELPPTKR 566 Query: 205 RNPGCEHWNV-------------IEEHLDLPADIXXXXXXXXXXXXXXRRVQFYSRNSLS 345 NV +++ +D+P + R+ FYSR+SL Sbjct: 567 APMKEVERNVFNCTCGVALPRSRLKDTVDVPIN-------EFTDALKGRKAAFYSRHSLG 619 Query: 346 YEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHADDEECYTNNAVV 525 Y YNGG H SKGWP+WV ++ +L L ED+DHCL Q+Y+E I YHADDE CYT+ VV Sbjct: 620 YNYNGGSHTSKGWPDWVNKVAMELGLGEDYDHCLAQVYEENKGINYHADDEPCYTDPEVV 679 Query: 526 TLNLVGEAEFSIKCPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKSLSKDRVSLTFRNGI 705 T+NL G A F +KC E L+ G L MP+G Q+ HKH+V SL+ RVSLTFRNGI Sbjct: 680 TVNLKGAANFYLKC--STECSLTLEDGDVLVMPKGFQNTHKHAVTSLTSGRVSLTFRNGI 737 Query: 706 LGADQGSDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMGITREICMSIIHSKMP 885 D+GSD +SEYEE+ E +ESL L +N K+LC + +++HM + IC S++ +K P Sbjct: 738 NEPDEGSDKMSEYEENSPELEESLDALEKNRKSLCALQILADHMRVDLAICTSMVFAKDP 797 Query: 886 RAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRELVCHADDEHLSHYHGP 1065 RAIEE+K GGM++ T + +LKSL++AAYI++ RGC+ G ++EL C+A+D+H+S + GP Sbjct: 798 RAIEEVKRGGMTLGTFICVLKSLNLAAYIESERGCLVVNGTYKELSCYAEDDHISEWSGP 857 Query: 1066 KNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLNKFQKHKGSEDAPVGT 1245 + +F NAL N DI + Y E+RAK L +SF+EGFTGVCLNKFQK K S + G+ Sbjct: 858 RKETSFANALSMNPDIRVVKYEVCEQRAKKLASSFQEGFTGVCLNKFQKQKSSFNLVNGS 917 Query: 1246 GKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMDWRNKVHKSIDVTTFES 1425 + +LGFAGSGKS+YPQ +L Y + LVIVPRKALC DW NKVH + V TFES Sbjct: 918 ELIDVHLTLGFAGSGKSFYPQCVLKNSSYSNALVIVPRKALCSDWINKVHPDVKVVTFES 977 Query: 1426 AFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPLQCNYYNKNDDLFLAPE 1605 AF++ K+ Y IV+DE+GLLPPGY+D+V G F YD+LL+LGDPLQC Y++K+D FL E Sbjct: 978 AFRQQKKGYGLIVIDEIGLLPPGYIDMVHGYFCYDSLLVLGDPLQCEYHSKSDHFFLGQE 1037 Query: 1606 RVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTWNEKVGNDMRIVASRKRK 1785 + FK G C YL+K+HRLP NQ LFE+ G + +T+N+ G D+ + AS++RK Sbjct: 1038 E-SIFKRFKGHCNYLYKSHRLPKNQRLFEIECDGAEGDG-LTFNKARGKDLTLCASQRRK 1095 Query: 1786 EIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTRARKQLNIVVGKDLKEKL 1965 E E N ST+GE+QGLS R N+L+D+DW+L+++E V+VAFTRARK++N++ L L Sbjct: 1096 ESE-KNVSTVGESQGLSANRVNILLDKDWSLVNEETVIVAFTRARKEINVIGNSRLISNL 1154 Query: 1966 IRHAKSGLLR 1995 R AKS +LR Sbjct: 1155 KRSAKSTILR 1164 Score = 487 bits (1254), Expect(2) = 0.0 Identities = 241/341 (70%), Positives = 273/341 (80%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 + +L++KE L SD+MEE+L GDPYLKGLL L+++ L+P+RTHL LS Sbjct: 1187 ECDLVKKEMLLGASDDMEEKLGGDPYLKGLLCLIDEIEEEEVEIPEPELLEPQRTHLPLS 1246 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 G NE+ V +LR K REA TEAG TDQIDE GYKGE NPM HKALYL+H+N DVATF Sbjct: 1247 VGENELCVSDLRAKEYREASTEAGRTDQIDEFGYKGEPENPMNHKALYLYHQNSDVATFF 1306 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 LSV+KRLRFRDAEKN RK+ K +GFG QMF +++Q YNL P+ LP L+R E EF +KRI Sbjct: 1307 LSVRKRLRFRDAEKNRRKFNKCRGFGAQMFGVMKQVYNLKQPDHLPSLERAEQEFMKKRI 1366 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 AKS LIEKHSYRS+PDWPSNYLKIFLKQQ CTKMEKR VDAKAGQTIACF HAVLCRFG Sbjct: 1367 AKSSKLIEKHSYRSEPDWPSNYLKIFLKQQRCTKMEKRKVDAKAGQTIACFCHAVLCRFG 1426 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TEKALR QLG NVMIYSQKNYTDLD W + +V + GTDSDY AFDRSQDEKIL Sbjct: 1427 PLLRQTEKALRDQLGPNVMIYSQKNYTDLDKWCKNFVRTLDGTDSDYGAFDRSQDEKILD 1486 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 FEV VL+FFLWPEE+I EYVTLKLMMGCSMG LA+MRFSGE Sbjct: 1487 FEVNVLRFFLWPEEMIEEYVTLKLMMGCSMGGLAVMRFSGE 1527 >gb|AFV34758.1| replicase [Grapevine virus B] Length = 1709 Score = 614 bits (1584), Expect(2) = 0.0 Identities = 318/666 (47%), Positives = 434/666 (65%), Gaps = 9/666 (1%) Frame = +1 Query: 25 PNDSFIGMRKFVRRTGLCTGVETLGLPWIYNPIERYESGFIDLSTLERELFG-------- 180 P D+F +R+ + G+ L W +P++RY G ID L LFG Sbjct: 507 PLDNFKALREPLTGRNGVIGMTCQLLTWEADPLKRYSMGLIDAKALNSALFGDRPPIPKE 566 Query: 181 KQVNKKERRNPGCEHWNVIEE-HLDLPADIXXXXXXXXXXXXXXRRVQFYSRNSLSYEYN 357 + +KE+ C + + L+ D+ R+ FYSR+SL Y YN Sbjct: 567 RPAQEKEQSVFNCSCGVALPKMKLNGSVDVPIKEFTDALKG---RKAAFYSRHSLGYNYN 623 Query: 358 GGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHADDEECYTNNAVVTLNL 537 GG H+SKGWPEW+ I+ +L L E++DHCL Q+Y+E I YHADDE CYT+ VVT+NL Sbjct: 624 GGSHSSKGWPEWIDGIAKELGLGEEYDHCLAQVYEENKGINYHADDEPCYTDPEVVTVNL 683 Query: 538 VGEAEFSIKCPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKSLSKDRVSLTFRNGILGAD 717 G A+F +KC E L+ G L MP+G Q+ HKH+V SL++ RVSLTFRNGI D Sbjct: 684 KGAAKFYLKC--STECSLSLEDGDVLVMPKGFQATHKHAVTSLTEGRVSLTFRNGINAPD 741 Query: 718 QGSDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMGITREICMSIIHSKMPRAIE 897 +GSD +SEYEE+ E +ESL L +N K+LC + +++HM + IC S++ +K PRAIE Sbjct: 742 EGSDKMSEYEENSPELEESLDALEKNRKSLCALQILADHMRVDLAICTSMVFAKDPRAIE 801 Query: 898 EIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRELVCHADDEHLSHYHGPKNMV 1077 E+K GGM++ T + +LKSL++AAYI++ RGC+ G ++EL C+A+D+H++ + GP+ Sbjct: 802 EVKRGGMTLGTFICVLKSLNLAAYIESERGCLVVNGTYKELSCYAEDDHIAAWTGPRKDT 861 Query: 1078 NFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLNKFQKHKGSEDAPVGTGKER 1257 +F NAL N DI I Y E+RAK L +SF+EGFTGVCLNKFQK K S + G Sbjct: 862 SFSNALSMNPDIRIVKYEVCEQRAKRLASSFQEGFTGVCLNKFQKQKSSFNLVNGKELID 921 Query: 1258 LFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMDWRNKVHKSIDVTTFESAFKK 1437 + +LGFAGSGKS+YPQ +L Y + LVIVPRKALC DW NKVH + V TFESAF++ Sbjct: 922 VHLTLGFAGSGKSFYPQCVLKNSSYANALVIVPRKALCSDWTNKVHPDVKVVTFESAFRQ 981 Query: 1438 GKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPLQCNYYNKNDDLFLAPERVNP 1617 K+ Y IV+DE+GLLPPGY+D+V G F YD+LL+LGDPLQC Y++K+D FL E + Sbjct: 982 QKKGYGLIVIDEIGLLPPGYIDMVHGYFCYDSLLVLGDPLQCEYHSKSDHFFLGQEE-SI 1040 Query: 1618 FKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTWNEKVGNDMRIVASRKRKEIEG 1797 FK G C YL+K+HRLP NQ LFE+ G E +T+N+ G D+ + AS++RKE E Sbjct: 1041 FKSFKGHCNYLYKSHRLPKNQRLFEIECDGAEGEG-LTFNKPRGKDLTLCASQRRKESE- 1098 Query: 1798 ANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTRARKQLNIVVGKDLKEKLIRHA 1977 N ST+GE+QGLS R N+L+D DW+L+++E V+VAFTRARK++N++ L L R A Sbjct: 1099 KNVSTVGESQGLSANRVNILLDRDWSLVNEETVVVAFTRARKEINVIGDTTLISNLKRSA 1158 Query: 1978 KSGLLR 1995 KS +LR Sbjct: 1159 KSTILR 1164 Score = 485 bits (1249), Expect(2) = 0.0 Identities = 237/341 (69%), Positives = 276/341 (80%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 + +L++KE L SDEMEE+L+GDPYLKGLL L+++ L+P+RTHL LS Sbjct: 1187 ECDLVKKEMLLGASDEMEEKLSGDPYLKGLLCLIDEIEEEEVEIPEPELLEPQRTHLPLS 1246 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 G NE+ + +LR K REA TEAG TDQID++GYKGE NPM HKALYL+H+N DVATF Sbjct: 1247 VGENELCISDLRAKEYREASTEAGRTDQIDDLGYKGEPENPMNHKALYLYHQNSDVATFF 1306 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 LSV+KRLRFRDAEKN RK+ K +GFG QMF +++Q YNL P+ LP L++ E +F +KRI Sbjct: 1307 LSVRKRLRFRDAEKNRRKFNKCRGFGAQMFGVMKQIYNLKQPDHLPLLEKAEQDFMKKRI 1366 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 AKS LIEKHSYRS+PDWPSNYLK+FLKQQ CTKMEKR VDAKAGQTIACF HAVLCRFG Sbjct: 1367 AKSSKLIEKHSYRSEPDWPSNYLKVFLKQQRCTKMEKRKVDAKAGQTIACFCHAVLCRFG 1426 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TE+ALR QLG NVMIYSQKNYTDLD W + +V + GTDSDYEAFDRSQDEKIL Sbjct: 1427 PLLRQTERALRDQLGPNVMIYSQKNYTDLDRWCKNFVRTLDGTDSDYEAFDRSQDEKILD 1486 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 FEV VL+FFLWPEE+I EYVTLKLMMGCSMG LA+MRFSGE Sbjct: 1487 FEVNVLRFFLWPEEMIEEYVTLKLMMGCSMGGLAVMRFSGE 1527 >gb|ABU62819.1| replicase [Grapevine virus B] Length = 1709 Score = 612 bits (1578), Expect(2) = 0.0 Identities = 317/671 (47%), Positives = 432/671 (64%), Gaps = 10/671 (1%) Frame = +1 Query: 13 VPMVPNDSFIGMRKFVRRTGLCTGVETLGLPWIYNPIERYESGFIDLSTLERELFGKQVN 192 V + P D F +R+ + G L L W +P++RY G ID L LFG + + Sbjct: 503 VVVSPLDDFKALREPLTGRNGVIGTTCLLLTWEADPLKRYSMGLIDAKELNLALFGNEPS 562 Query: 193 KKERRNPGCEHWNVIEEHLDLPADIXXXXXXXXXXXXXX----------RRVQFYSRNSL 342 N + V++ + I R+ FYSR+SL Sbjct: 563 S----NSKSQEKKVVQSAFNCTCGIALPMKXLKNAVNVPTSDFTDALKGRKAAFYSRHSL 618 Query: 343 SYEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHADDEECYTNNAV 522 SY YNGG H SKGWPEW+ ++ L L ED+DHCL Q+Y+E I +HADDE CYT+ V Sbjct: 619 SYSYNGGSHTSKGWPEWINEVAKDLGLGEDYDHCLAQMYEENKGINHHADDELCYTDPEV 678 Query: 523 VTLNLVGEAEFSIKCPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKSLSKDRVSLTFRNG 702 VT+NL G A+F +KC G E L+ G L MP+G Q+ HKH+V SLS+ RVSLTFRNG Sbjct: 679 VTVNLKGTAKFHLKC--GEECSLTLQDGDVLVMPKGFQTTHKHAVTSLSEGRVSLTFRNG 736 Query: 703 ILGADQGSDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMGITREICMSIIHSKM 882 I D+GSD +SEYEE+ E +ESL L +N K+LC + +++HM + IC S++ +K Sbjct: 737 INAPDEGSDKMSEYEENSPELEESLDALEKNRKSLCALQILADHMRVDLAICTSMVFAKD 796 Query: 883 PRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRELVCHADDEHLSHYHG 1062 PRAIEE+K GGM++ T + +LKSL++AAYI++ RGC+ G+++EL C+A+D+H+S + G Sbjct: 797 PRAIEEVKRGGMTLGTFICVLKSLNLAAYIESERGCLVVNGSYKELSCYAEDDHISEWSG 856 Query: 1063 PKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLNKFQKHKGSEDAPVG 1242 P+ +F NAL N DI + Y E+RAK L+ SF+EGFTGVCLNKFQK K S + G Sbjct: 857 PRKETSFSNALSMNPDIRVVKYEVCEQRAKKLVNSFQEGFTGVCLNKFQKQKSSFNLVNG 916 Query: 1243 TGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMDWRNKVHKSIDVTTFE 1422 + +LGFAGSGKS+YPQ +L Y +TLVIVPRKALC DW NKVH + V T+E Sbjct: 917 KELIDIHLTLGFAGSGKSFYPQCVLKNSSYSNTLVIVPRKALCSDWINKVHPDVKVVTYE 976 Query: 1423 SAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPLQCNYYNKNDDLFLAP 1602 AF++ K+ Y IV+DE+GLLPPGY+D+V G F YD+LL+LGDPLQC Y++K+D FL Sbjct: 977 CAFRQQKKGYGLIVIDEIGLLPPGYIDMVHGYFCYDSLLVLGDPLQCEYHSKSDHFFLGQ 1036 Query: 1603 ERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTWNEKVGNDMRIVASRKR 1782 E + FK G C YL+K+HRLP NQ LFE+ G +T+N+ G D+ + AS++R Sbjct: 1037 EE-SIFKKFKGHCNYLYKSHRLPKNQRLFEIECDGAE-GGGLTFNKPRGKDLTLCASQRR 1094 Query: 1783 KEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTRARKQLNIVVGKDLKEK 1962 KE E + ST+GE+QGLS R N+L+D+DW +++E V+VAFTRARK++N++ L Sbjct: 1095 KESE-RDVSTVGESQGLSANRVNILLDKDWGRVNEETVVVAFTRARKEINLIGYSSLVSN 1153 Query: 1963 LIRHAKSGLLR 1995 L R AKS +LR Sbjct: 1154 LKRSAKSMILR 1164 Score = 487 bits (1253), Expect(2) = 0.0 Identities = 240/341 (70%), Positives = 273/341 (80%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 + +L++KE L SDEMEE+L GDPYLKGLL L+++ L+P+RTHL LS Sbjct: 1187 ECDLVKKEMLLGASDEMEEKLGGDPYLKGLLCLIDEIEEEEVEMPEPELLEPQRTHLPLS 1246 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 G NE+ + +LR K REA TEAG TDQIDE GYKGE NPM HKALYL+H+N DVATF Sbjct: 1247 VGENELCISDLRAKEHREASTEAGRTDQIDEFGYKGEPENPMNHKALYLYHQNSDVATFF 1306 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 LSV+KRLRFRDAEKN RK+ K +GFG QMF +++Q Y L P+ LP L+R E +F +KRI Sbjct: 1307 LSVRKRLRFRDAEKNRRKFNKCRGFGAQMFGVMKQIYKLKQPDHLPSLERAEQDFMKKRI 1366 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 AKS LIEKHSYRS+PDWPSNYLKIFLKQQ CTKMEKR VDAKAGQTIACF HAVLCRFG Sbjct: 1367 AKSSKLIEKHSYRSEPDWPSNYLKIFLKQQRCTKMEKRKVDAKAGQTIACFCHAVLCRFG 1426 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TEKALR QLG NVMIYSQKNYTDLD W + +V + GTDSDYEAFDRSQDEKIL Sbjct: 1427 PLLRQTEKALRDQLGPNVMIYSQKNYTDLDKWCKNFVRTLDGTDSDYEAFDRSQDEKILD 1486 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 FEV VL+FFLWPEE+I EYVTLKLMMGCSMG LA+MRFSGE Sbjct: 1487 FEVNVLRFFLWPEEMIEEYVTLKLMMGCSMGGLAVMRFSGE 1527 >gb|AET36885.1| putative replicase, partial [Actinidia virus A] Length = 1714 Score = 595 bits (1534), Expect(2) = 0.0 Identities = 325/671 (48%), Positives = 417/671 (62%), Gaps = 14/671 (2%) Frame = +1 Query: 25 PNDSFIGMRKFVRRTGLCTGVETLGLPWIYNPIERYESGFIDLSTLERELFG----KQVN 192 P D+F +R F+ R G G+ + GLPW + I+RYE G ID LE +FG ++V+ Sbjct: 505 PLDNFKALRLFIIRIGPIRGLTSRGLPWQNDAIKRYEQGVIDAKRLEEIMFGVKRIERVS 564 Query: 193 KKERRN---------PGCEHWNVIEEHLDLPADIXXXXXXXXXXXXXXRRVQFYSRNSLS 345 K R C I R+ FYSR+S S Sbjct: 565 GKTLRTVQEGPAKCTTACTCGATITTFRADGLPNMEGFIESWCDKLKGRKACFYSRHSAS 624 Query: 346 YEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHADDEECYTNNAVV 525 YEYNGG H S GWPE ++ ++ KLNL E +DHCL Q+Y+ G+ IGYHADDE+CY + +VV Sbjct: 625 YEYNGGNHQSAGWPEEIEEMAKKLNLDESYDHCLAQVYEAGSGIGYHADDEDCYNDPSVV 684 Query: 526 TLNLVGEAEFSIKCPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKSLSKDRVSLTFRNGI 705 T+NL GEA F KC N E + L AG L M +G Q HKHSV S + RVSLTFRN I Sbjct: 685 TVNLKGEAVFKTKCTN--ELTFDLGAGDVLIMHKGFQKTHKHSVVSKTPGRVSLTFRNSI 742 Query: 706 LGADQGSDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMGITREICMSIIHSKMP 885 AD SD LSEYEE FDE+L+IL +N K+LCC+DRI+EHMG++RE+C S IH+KMP Sbjct: 743 KQADSDSDHLSEYEETESPFDETLEILGKNIKSLCCLDRIAEHMGVSREVCASHIHAKMP 802 Query: 886 RAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRELVCHADDEHLSHYHGP 1065 RA+EE K+GGMS+STLLQ+LK LDVA YI + RG V T G F+E+ A D+H+ + G Sbjct: 803 RAVEEFKEGGMSISTLLQVLKQLDVAGYICSERGEVRTLGKFKEISLFASDDHIEPFPGE 862 Query: 1066 KNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLNKFQKHKGSEDAPVGT 1245 K FE+A+ FN D+S ++ +++A L SF EGFTG+ LNKF+ G Sbjct: 863 KGDCTFESAMDFNPDVSRVHFVVDQEKANHLSESFREGFTGISLNKFR--GGVPRTTPQK 920 Query: 1246 GKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMDWRNKVHKSIDVTTFES 1425 + T +GFAGSGKSYYPQTLL G Y +LVI PRKAL DW +K+ K DV TFE Sbjct: 921 FSREVHTLMGFAGSGKSYYPQTLLKGGAYKSSLVITPRKALASDWESKIAKGADVATFEV 980 Query: 1426 AFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPLQCNYYNKNDDLFLAPE 1605 AFK KR ++N+++DE+GLLPPGY+DL I F + +L+LGDPLQ Y+NK D+LFLAP Sbjct: 981 AFKVKKR-FDNLIIDEIGLLPPGYIDLAILHFNPECVLLLGDPLQAEYHNKQDELFLAPI 1039 Query: 1606 RVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTWNEKVGN-DMRIVASRKR 1782 + F L G YLFKTHRLP NQ + EVPS GE YV +K D+ + ASR Sbjct: 1040 TESIFSRLQGKVNYLFKTHRLPRNQEIIEVPSKGELSPDYVGGAQKQRTADLILHASRSA 1099 Query: 1783 KEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTRARKQLNIVVGKDLKEK 1962 K+ +STIGE QGLS L +D DW L+SD+ MVA TRARK L + + +L++ Sbjct: 1100 KDKGAQGSSTIGEAQGLSANAVRLEMDLDWGLISDQHFMVALTRARKSLQVNIKSELRKH 1159 Query: 1963 LIRHAKSGLLR 1995 LI A+S L+ Sbjct: 1160 LINTARSPFLK 1170 Score = 503 bits (1294), Expect(2) = 0.0 Identities = 246/341 (72%), Positives = 279/341 (81%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 DV+ IEKE R ADSD+ME++LAGDPYLKGLL L +D +P++THL +S Sbjct: 1193 DVDFIEKEMRFADSDDMEDKLAGDPYLKGLLKLYQDVEMEEVEIIEPHLGEPQKTHLPIS 1252 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 A NE+SV L+ K RE T AG+T+QID+ GYKG++A+PMTHKALYLHHKN DVATF Sbjct: 1253 AHENEISVSLLKAKEHREVLTSAGITEQIDDEGYKGDTADPMTHKALYLHHKNSDVATFF 1312 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 LSVKKRLRFRD E+N+RK+ K +GFG QMF IL++TY L P LP+LDR E EF +KR+ Sbjct: 1313 LSVKKRLRFRDQERNTRKFNKCRGFGAQMFNILKKTYKLQQPLQLPDLDRVETEFVKKRL 1372 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 KS+NLIEKHSYRSDPDWPSNYLK+FLKQQ CTKMEKRGVDAKAGQTIACF HAVLCRFG Sbjct: 1373 NKSKNLIEKHSYRSDPDWPSNYLKVFLKQQTCTKMEKRGVDAKAGQTIACFCHAVLCRFG 1432 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 QLRRTEKALRAQLG NV+IYSQ NYTDLD W + +V MIGTDSDYEAFDRSQDEKIL Sbjct: 1433 VQLRRTEKALRAQLGPNVLIYSQLNYTDLDKWCKNFVPSMIGTDSDYEAFDRSQDEKILD 1492 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 FE+EVLKFFLWPEELI EY LKLMMGCSMG LA+MRFSGE Sbjct: 1493 FELEVLKFFLWPEELIEEYKCLKLMMGCSMGGLAVMRFSGE 1533 >ref|NP_619654.1| putative replicase [Grapevine virus B] gi|1061119|emb|CAA53196.1| putative replicase [Grapevine virus B] Length = 1707 Score = 583 bits (1504), Expect(2) = 0.0 Identities = 312/667 (46%), Positives = 414/667 (62%), Gaps = 6/667 (0%) Frame = +1 Query: 13 VPMVPNDSFIGMRKFVRRTGLCTGVETLGLPWIYNPIERYESGFIDLSTLERELFG--KQ 186 V + P D F MRK + G L L W Y+P++RY G I + L + G K Sbjct: 502 VVLSPLDDFRSMRKALTDRDGILGTTCLLLEWEYDPLKRYSMGLITATELNAAIIGTTKI 561 Query: 187 VNKKERRNPGCEHWNVIEEHLDLPA----DIXXXXXXXXXXXXXXRRVQFYSRNSLSYEY 354 KKE E + + LP RR FYSR+S +Y Y Sbjct: 562 TAKKEMAKECSERYQQCSCGVRLPMRKLETPLKVPTEEFTDALKGRRAAFYSRHSWNYSY 621 Query: 355 NGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHADDEECYTNNAVVTLN 534 G HASKGWPEWV I++KL L EDFDHCL QIY+E I ++ADDE CYT+ VVT+N Sbjct: 622 TGANHASKGWPEWVSNIAEKLGLGEDFDHCLAQIYEEDKGINFNADDEPCYTDPEVVTVN 681 Query: 535 LVGEAEFSIKCPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKSLSKDRVSLTFRNGILGA 714 L G A F +KC G+ES+ L G L MP+G Q HKH+V S R+SLTFRNGI Sbjct: 682 LNGNANFHLKC--GSESVVPLSDGDVLIMPKGFQKTHKHAVTGTSAGRISLTFRNGINAP 739 Query: 715 DQGSDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMGITREICMSIIHSKMPRAI 894 D+GSD +SEYEE K + +++HM + IC S++ +K PRA Sbjct: 740 DEGSDKMSEYEETH-RIGGKPGCPREEQKESVSLQILADHMRVDLAICTSMVFAKDPRAR 798 Query: 895 EEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRELVCHADDEHLSHYHGPKNM 1074 EE+K GGM++ T + +LKSL++ AYI++ RGC+ G ++EL C+A+D+H+S + GP+ Sbjct: 799 EEVKRGGMTLGTFICVLKSLNLGAYIESERGCLYVNGAYKELSCYAEDDHISEWSGPRKE 858 Query: 1075 VNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLNKFQKHKGSEDAPVGTGKE 1254 F NAL N DI + Y E+RAK L+ SF+EGFTGVCLNKFQK K S + G Sbjct: 859 TTFSNALSMNPDIRVVKYEVCEQRAKKLVDSFQEGFTGVCLNKFQKQKSSFNLVNGKELI 918 Query: 1255 RLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMDWRNKVHKSIDVTTFESAFK 1434 + +LGFAGSGKS+YPQ +L Y ++LVIVPRKALC DW NKVH + V TFESAF+ Sbjct: 919 DVHLTLGFAGSGKSFYPQCVLKNSHYANSLVIVPRKALCSDWSNKVHPDVKVVTFESAFR 978 Query: 1435 KGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPLQCNYYNKNDDLFLAPERVN 1614 + K+ Y IV+DE+GLLPPGY+D+V G F YD+LL+LGDPLQC Y++K D FL E + Sbjct: 979 QQKKGYGLIVIDEIGLLPPGYIDMVHGYFCYDSLLVLGDPLQCEYHSKADHFFLGQEE-S 1037 Query: 1615 PFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTWNEKVGNDMRIVASRKRKEIE 1794 FK G C YL+K+HRLP NQ LFE+ G E VT+N+ D+ + AS++RK+ E Sbjct: 1038 VFKKFKGHCNYLYKSHRLPRNQKLFEIECDGAEGEG-VTFNKPRAKDLTLCASQRRKDSE 1096 Query: 1795 GANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTRARKQLNIVVGKDLKEKLIRH 1974 + +T+GE+QGLS R N+L+D+DW+L++DE V+VAFTRARK++NI+ L L R Sbjct: 1097 -KDVNTVGESQGLSANRVNILLDKDWSLVNDETVIVAFTRARKEINIIGDASLVNNLKRS 1155 Query: 1975 AKSGLLR 1995 AKS +L+ Sbjct: 1156 AKSTVLK 1162 Score = 479 bits (1232), Expect(2) = 0.0 Identities = 235/341 (68%), Positives = 270/341 (79%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 DV + + SDEMEE+L+GDPYLKGLL L+++ L+P++THL L Sbjct: 1185 DVIWLRRRCCSGQSDEMEEKLSGDPYLKGLLCLIDETEEEEVEIPEPELLEPQKTHLPLC 1244 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 G NE+S+ +LR K +RE TEAG TDQIDE+GYKGE NPM HKALYL+H+N DVATF Sbjct: 1245 VGENELSISDLRSKESREVSTEAGRTDQIDELGYKGEPENPMNHKALYLYHQNSDVATFF 1304 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 LS++KRLRFRD EKN RK+ K KGFG QMF +++ YNL P+ LP L+R E +F +KRI Sbjct: 1305 LSIRKRLRFRDPEKNRRKFNKCKGFGAQMFGVMKSVYNLKQPDHLPLLERAEQDFMKKRI 1364 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 AKS LIEKHSYRS+PDWPSNYLKIFLKQQ CTKMEKR VDAKAGQTIACF HAVLCRFG Sbjct: 1365 AKSAKLIEKHSYRSEPDWPSNYLKIFLKQQRCTKMEKRKVDAKAGQTIACFCHAVLCRFG 1424 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TEKALR QLG NVMIYSQKNYTDLD W + +V + GTDSDYEAFDRSQDEK+L Sbjct: 1425 PLLRQTEKALRDQLGPNVMIYSQKNYTDLDKWCKGFVHTLDGTDSDYEAFDRSQDEKVLD 1484 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 FEV VLKFFLWPEE+I EYVTLKLMMGCSMG LA+MRFSGE Sbjct: 1485 FEVNVLKFFLWPEEMIEEYVTLKLMMGCSMGSLAVMRFSGE 1525 >gb|AFV73358.1| 195 kDa replicase [Grapevine virus A] Length = 1710 Score = 451 bits (1161), Expect(2) = 0.0 Identities = 227/338 (67%), Positives = 263/338 (77%) Frame = +2 Query: 2012 LIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLSAGL 2191 +I +E RLA + + EERLAGDPYLK LLSL ED L+P RTHL LS L Sbjct: 1196 IIFEENRLASNVDYEERLAGDPYLKSLLSLYEDIEEEEVTLEEPVALEPIRTHLPLSEKL 1255 Query: 2192 NEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFMLSV 2371 NE+ +L+ K RE +T+AG T+QIDE GY SANPM+HKALYL H +DD ATFM+SV Sbjct: 1256 NELVPFDLKAKEDREQYTDAGRTEQIDEEGYAQWSANPMSHKALYLRHTSDDTATFMMSV 1315 Query: 2372 KKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRIAKS 2551 KKRLR+R E N RKY G G+QMF +L++TY SLPEL++CE EF RKR+ KS Sbjct: 1316 KKRLRYRSYEGNRRKYLACHGIGRQMFSVLKETYQWRDIESLPELEKCEKEFMRKRVEKS 1375 Query: 2552 RNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFGPQL 2731 LIE+HS RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIACF+H+VLCRFGP L Sbjct: 1376 AALIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFGPLL 1435 Query: 2732 RRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILSFEV 2911 R+TEKA R L +NVMIYSQKNY DLD W++ +V+GM+GTDSDYEAFDRSQDEKIL E+ Sbjct: 1436 RQTEKAFRELLPENVMIYSQKNYMDLDKWAKTWVEGMLGTDSDYEAFDRSQDEKILDMEI 1495 Query: 2912 EVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVLKFFLWPEE+I EY TLKLMMG ++GDLAIMRFSGE Sbjct: 1496 EVLKFFLWPEEMIKEYETLKLMMGSALGDLAIMRFSGE 1533 Score = 416 bits (1070), Expect(2) = 0.0 Identities = 254/667 (38%), Positives = 360/667 (53%), Gaps = 13/667 (1%) Frame = +1 Query: 34 SFIGMRKFVRRTGLCTGVETLGLPWIYNPIERYESGFIDLSTLERELFGKQVNKKERR-- 207 S +R F+ R G +E+ GL + + E E G ++ +E LF Q + E Sbjct: 510 SLSNLRLFLVRLGRFRYMESRGLTDVQDMQEALEDGLLNEEEVEARLFTYQGSDSEGEAV 569 Query: 208 ----NPGCEHWNVIEEHLDLPADIXXXXXXXXXXXXXXRRVQFYSRNSLSYEYNGGKHAS 375 G E N R V FYSRNS Y YNGG H S Sbjct: 570 EECVTGGLETNNDKSGTPSFSKVRKLLEENIFTDQLKGREVAFYSRNSKVYNYNGGSHRS 629 Query: 376 KGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHADDEECYT-NNAVVTLNLVGEAE 552 GW E + + +L L E +DHCL+Q Y + IG+HADDE CY +VVT+NL GEA Sbjct: 630 LGWDEALDALVAELGLDESYDHCLIQRYKKEGSIGFHADDEPCYLPGGSVVTVNLNGEAI 689 Query: 553 FSIK-CPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKSLSKDRVSLTFRNGILGAD-QGS 726 F +K +G +K G TM GMQ HKH V+SLS R S+T RN + + Q Sbjct: 690 FEVKENKSGTTEEIHMKDGDVYTMGPGMQQTHKHRVRSLSDGRCSITLRNKTVDYEAQRK 749 Query: 727 DTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMGITREICMSIIHSKMPRAIEEIK 906 + S+YEED + DE ++ L RNS N+C + I+EHM ++ +SI++ + P+ ++EI+ Sbjct: 750 EETSDYEEDVADVDEGIEYLQRNSANMCSLKAIAEHMQLSIPTVVSIVNGESPQTLKEIE 809 Query: 907 DGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRELVCHADDEHLSHYHGPKNMVNFE 1086 GG+SV+TL+ + ++L + RG T G++R+L D H+ + G + Sbjct: 810 SGGVSVATLVSLSRALGFPIALHGDRGFAQTQGDYRKLHLRVGDGHVEPFEGVASTGGLR 869 Query: 1087 NALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLNKFQK---HKGSEDAPVGTGKER 1257 ALL + + + + +A L SF G TGV L K+ K H + PV Sbjct: 870 EALLLSDGVGQGIFRVDKAKADRLAQSFYSGCTGVLLGKYNKGKMHSAELEEPV-----E 924 Query: 1258 LFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMDWRNKVHKSIDVTTFESAFKK 1437 + TS GFAGSGKS++ QT+L + TL+I PRK L DW K+ K V TFE AF Sbjct: 925 VLTSFGFAGSGKSHWCQTILRSCDVEKTLIISPRKVLKDDWVGKISKKHKVVTFEVAF-M 983 Query: 1438 GKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPLQCNYYNKNDDLFLAPERVNP 1617 + IV+DE+GLLPPGY+DLVI F+ TL++LGDPLQ +Y++K D++ L + + Sbjct: 984 DDFGCKAIVIDEIGLLPPGYIDLVISVFRPSTLVLLGDPLQSSYHSKRDNVVLEASQEDV 1043 Query: 1618 FKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTWNEKVGNDMRIV-ASRKRKEIE 1794 F + G+ YL +HRLP N +FE+ G EK VT+ K G D ++ A+R KE Sbjct: 1044 FSRIKGALPYLCYSHRLPKNCKIFEIECMGNETEKRVTFRSKRGKDEPVICATRAMKEAN 1103 Query: 1795 GANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTRARKQLNIVVGKDLKEKLIRH 1974 G+ T+ ETQGLS + + + E WA DE VMVAFTR+R ++ I V + LKE L+R Sbjct: 1104 GSGWYTVSETQGLSFKTCMIKLCEHWAKKEDEDVMVAFTRSRGEIAIDVDRKLKEMLLRT 1163 Query: 1975 AKSGLLR 1995 +KS LL+ Sbjct: 1164 SKSELLK 1170 >gb|ABH07008.1| putative replicase [Grapevine virus A] Length = 1710 Score = 452 bits (1164), Expect(2) = 0.0 Identities = 227/338 (67%), Positives = 262/338 (77%) Frame = +2 Query: 2012 LIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLSAGL 2191 ++ +E RLA + + EERLAGDPYLK LLSL ED L+P RTHL LS L Sbjct: 1196 IVFEENRLASNVDYEERLAGDPYLKSLLSLYEDIEEEEVEIEEPVALEPIRTHLPLSEKL 1255 Query: 2192 NEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFMLSV 2371 NE+ +L+ K RE +TEAG T+QIDE GY ANPMTHKALYL H +DD ATFM+SV Sbjct: 1256 NELIPFDLKAKEDREQYTEAGRTEQIDEEGYGQWGANPMTHKALYLRHTSDDTATFMMSV 1315 Query: 2372 KKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRIAKS 2551 KKRLR+R E N RKY G G+QMF +L++TY SLPEL++CE EF RKR+ KS Sbjct: 1316 KKRLRYRSYEGNRRKYLSCHGIGRQMFSVLKETYQWKDIESLPELEKCEKEFMRKRVEKS 1375 Query: 2552 RNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFGPQL 2731 LIE+HS RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIACF+H+VLCRFGP L Sbjct: 1376 AALIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFGPLL 1435 Query: 2732 RRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILSFEV 2911 R+TEKA R L +NVMIYSQKNY DLD WS+ +V+GM+GTDSDYEAFDRSQDEKIL E+ Sbjct: 1436 RQTEKAFRELLPENVMIYSQKNYMDLDKWSKTWVEGMLGTDSDYEAFDRSQDEKILDMEI 1495 Query: 2912 EVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVL+FFLWPEE+I EY TLKLMMG ++GDLAIMRFSGE Sbjct: 1496 EVLRFFLWPEEMIQEYETLKLMMGSALGDLAIMRFSGE 1533 Score = 408 bits (1048), Expect(2) = 0.0 Identities = 250/665 (37%), Positives = 365/665 (54%), Gaps = 11/665 (1%) Frame = +1 Query: 34 SFIGMRKFVRRTGLCTGVETLGLPWIYNPIERYESGFIDLSTLERELFGKQVNKKERRNP 213 S + +R F+ R G +E+ GL + + E E G + +E LF Q + E Sbjct: 510 SLLNLRMFLIRLGRFRYMESRGLTDVQDMQEALEDGLLSEEEVEARLFTSQDTESEGSTS 569 Query: 214 GCEHWNVIEEHLDLPADIXXXXXXXXXXXXXX-------RRVQFYSRNSLSYEYNGGKHA 372 E ++++E + A R V FYSR S Y+Y GG H Sbjct: 570 E-ETGHIVDEPRNDEAGTPRFSKVRNLIKEGIFTEQLKGREVAFYSRYSKDYKYAGGHHR 628 Query: 373 SKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHADDEECYT-NNAVVTLNLVGEA 549 S GW + + + +L L E +DHCL+Q Y + IG+HADDE CY +VVT+NL GEA Sbjct: 629 SLGWDDALDALIAELGLDESYDHCLIQRYMKDGAIGFHADDEPCYLPGGSVVTVNLNGEA 688 Query: 550 EFSIK-CPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKSLSKDRVSLTFRNGILGAD-QG 723 F +K +G +K G TM GMQ HKH V+SLS R S+T R+ + + Q Sbjct: 689 LFEVKENSSGVIKKIHMKDGDVYTMGPGMQQTHKHRVQSLSDGRCSITLRDKTVDYEAQR 748 Query: 724 SDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMGITREICMSIIHSKMPRAIEEI 903 + SEYEED + DE ++ L RNS N+C + I+EHM ++ +SI++ + P+ ++EI Sbjct: 749 KEGSSEYEEDIADADEGIEYLKRNSANMCSLKAIAEHMQLSIPTVVSIVNGESPQTLKEI 808 Query: 904 KDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRELVCHADDEHLSHYHGPKNMVNF 1083 + GG+SV+TL+ + ++L + +RG T G++R+L D H+ + G + Sbjct: 809 ESGGVSVATLVSLSRTLGFPIALHGNRGFAQTQGDYRKLHLRVGDGHVEPFEGVASSGGL 868 Query: 1084 ENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLNKFQKHKGSEDAPVGTGKERLF 1263 ALL + I + + +A L SF G TGV L K+ +KG A + Sbjct: 869 REALLLSDGIGQGIFRVDKVKADRLAQSFYSGCTGVLLGKY--NKGKMHAAELEEPTEVL 926 Query: 1264 TSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMDWRNKVHKSIDVTTFESAFKKGK 1443 TS GFAGSGKS++ QT+L + TLVI PRK L DW K+ K V TFE AF Sbjct: 927 TSFGFAGSGKSHWCQTILRSCDVEKTLVISPRKVLKDDWAGKISKKHKVVTFEVAF-MDD 985 Query: 1444 RHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPLQCNYYNKNDDLFLAPERVNPFK 1623 + IV+DE+GLLPPGY+DLVI F +TL++LGDPLQ +Y++K D++ L + + F Sbjct: 986 FGCKAIVIDEIGLLPPGYIDLVISVFHPNTLVLLGDPLQSSYHSKRDNVILEASQEDIFN 1045 Query: 1624 LLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTWNEKVGNDMRIV-ASRKRKEIEGA 1800 + G+ YL +HR P N +FE+ G EK +T+ K G D ++ A+R +E+ G+ Sbjct: 1046 RIKGALPYLCYSHRPPKNCKIFEIECMGGEAEKRITFRSKRGKDEPVICATRAMREMNGS 1105 Query: 1801 NASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTRARKQLNIVVGKDLKEKLIRHAK 1980 T+ ETQGLS + + + E WA +DE VMVAFTR+R ++ I V + LKE L+R +K Sbjct: 1106 GWYTVSETQGLSFKTCMIQLCEHWAKKNDEDVMVAFTRSRGEIAISVDRKLKEVLLRTSK 1165 Query: 1981 SGLLR 1995 S LLR Sbjct: 1166 SELLR 1170 >gb|ABG37965.1| putative replicase [Grapevine virus A] Length = 1710 Score = 452 bits (1163), Expect(2) = 0.0 Identities = 227/338 (67%), Positives = 262/338 (77%) Frame = +2 Query: 2012 LIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLSAGL 2191 ++ +E RLA + + EERLAGDPYLK LLSL ED L+P RTHL LS L Sbjct: 1196 VVFEENRLASNVDYEERLAGDPYLKSLLSLYEDIEEEEVEIEEPVALEPIRTHLPLSEKL 1255 Query: 2192 NEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFMLSV 2371 NE+ +L+ K RE +TEAG T+QIDE GY ANPMTHKALYL H +DD ATFM+SV Sbjct: 1256 NELIPFDLKAKEDREQYTEAGRTEQIDEEGYGQWGANPMTHKALYLRHTSDDTATFMMSV 1315 Query: 2372 KKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRIAKS 2551 KKRLR+R E N RKY G G+QMF +L++TY SLPEL++CE EF RKR+ KS Sbjct: 1316 KKRLRYRSYEGNRRKYLSCHGIGRQMFSVLKETYQWKDIESLPELEKCEKEFMRKRVEKS 1375 Query: 2552 RNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFGPQL 2731 LIE+HS RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIACF+H+VLCRFGP L Sbjct: 1376 AALIEQHSGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFGPLL 1435 Query: 2732 RRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILSFEV 2911 R+TEKA R L +NVMIYSQKNY DLD WS+ +V+GM+GTDSDYEAFDRSQDEKIL E+ Sbjct: 1436 RQTEKAFRELLPENVMIYSQKNYMDLDKWSKTWVEGMLGTDSDYEAFDRSQDEKILDMEI 1495 Query: 2912 EVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVL+FFLWPEE+I EY TLKLMMG ++GDLAIMRFSGE Sbjct: 1496 EVLRFFLWPEEMIQEYETLKLMMGSALGDLAIMRFSGE 1533 Score = 408 bits (1048), Expect(2) = 0.0 Identities = 251/676 (37%), Positives = 363/676 (53%), Gaps = 22/676 (3%) Frame = +1 Query: 34 SFIGMRKFVRRTGLCTGVETLGLPWIYNPIERYESGFIDLSTLERELFGKQ--------- 186 S + +R F+ R G +E+ G + + E E G + +E LF Q Sbjct: 510 SLLNLRLFLIRLGRFRYMESRGPTDVQDMQEALEDGLLSEEEVEARLFTSQDTESEGSTN 569 Query: 187 ------VNKKERRNPGCEHWNVIEEHLDLPADIXXXXXXXXXXXXXXRRVQFYSRNSLSY 348 VN+ G ++ + E + R V FYSR S Y Sbjct: 570 EETGHIVNESRNDEVGTPRFSKVRELIK---------EGIFTEQLKGREVAFYSRYSKDY 620 Query: 349 EYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHADDEECYT-NNAVV 525 +Y GG H S GW + + + +L L E +DHCL+Q Y + IG+HADDE CY +VV Sbjct: 621 KYAGGHHRSLGWDDALDSLVAELGLDESYDHCLIQRYVKDGAIGFHADDEPCYLPGGSVV 680 Query: 526 TLNLVGEAEFSIK-CPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKSLSKDRVSLTFRNG 702 T+NL GEA F +K +GA +K G TM GMQ HKH V+SLS R S+T R+ Sbjct: 681 TVNLNGEALFEVKENSSGAIKQIHMKDGDVYTMGPGMQQTHKHRVQSLSDGRCSITVRDK 740 Query: 703 ILGAD-QGSDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMGITREICMSIIHSK 879 + + Q + SEYEED + DE ++ L RNS N+C + I+EHM ++ +SI++ + Sbjct: 741 TVDYEAQRKEGSSEYEEDVADADEGIEYLKRNSANMCSLKAIAEHMQLSIPTVVSIVNGE 800 Query: 880 MPRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRELVCHADDEHLSHYH 1059 P+ ++EI+ GG+SV+TL+ + ++L + RG T G++R+L D H+ + Sbjct: 801 SPQTLKEIESGGVSVATLVGLSRTLGFPIALHGDRGFAQTQGDYRKLHLRVGDGHVEPFE 860 Query: 1060 GPKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLNKFQK---HKGSED 1230 G + + ALL + + + + +A L SF G TGV L K+ K H D Sbjct: 861 GVASSGGLKEALLLSDGVGQGIFRVDKAKADRLAQSFYSGCTGVLLGKYNKGKMHAAELD 920 Query: 1231 APVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMDWRNKVHKSIDV 1410 P + TS GFAGSGKS++ QT+L + TL+I PRK L DW K+ K V Sbjct: 921 EPT-----EVLTSFGFAGSGKSHWCQTILRSCDVEKTLIISPRKVLKDDWVGKISKKHKV 975 Query: 1411 TTFESAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPLQCNYYNKNDDL 1590 TFE AF + IV+DE+GLLPPGY+DLVI F TL++LGDPLQ +Y++K D++ Sbjct: 976 VTFEVAF-MDDFGCKAIVIDEIGLLPPGYIDLVISVFHPSTLVLLGDPLQSSYHSKRDNV 1034 Query: 1591 FLAPERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTWNEKVGNDMRIV- 1767 L + + F + G+ YL +HRLP N +FE+ G EK +T+ K G D ++ Sbjct: 1035 ILEASQEDVFSRIKGALPYLCYSHRLPKNCKIFEIECMGGEAEKRITFRSKRGKDEPVIC 1094 Query: 1768 ASRKRKEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTRARKQLNIVVGK 1947 A+R +E+ G+ T+ ETQGLS + + + E WA DE VMVAFTR+R ++ I V K Sbjct: 1095 ATRAMREMNGSGWYTVSETQGLSFKTCMIQLCEHWAKKEDEDVMVAFTRSRGEIAISVDK 1154 Query: 1948 DLKEKLIRHAKSGLLR 1995 LKE L+R +KS LLR Sbjct: 1155 KLKEVLLRTSKSELLR 1170 >gb|ACA52189.1| 194 kDa protein [Grapevine virus A] Length = 1707 Score = 452 bits (1164), Expect(2) = 0.0 Identities = 223/341 (65%), Positives = 268/341 (78%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 +V ++ +E RLA++ + E RLAGDPYLK LLSL ++ L+P +THL LS Sbjct: 1190 EVTVMFEESRLAETVDYEARLAGDPYLKSLLSLYDEIEMEEVEIEEPTALEPVKTHLALS 1249 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 LNE++ +L+ K RE +TEAG T+QIDE GYKGE+ANPMTHKALYL H +DD ATFM Sbjct: 1250 EKLNELAPFDLKAKEYREQYTEAGRTEQIDEEGYKGENANPMTHKALYLRHTSDDTATFM 1309 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 +SVKKRLRFR+ E N RKY+ G G+QMF + ++ Y L +SLPEL+RCE EF +KR+ Sbjct: 1310 MSVKKRLRFRNFEANRRKYKACHGIGQQMFSVFKEIYQLKEIDSLPELERCEMEFMKKRV 1369 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 KS LIE+H+ RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIA F+H+VLCRFG Sbjct: 1370 EKSAGLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIARFAHSVLCRFG 1429 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TE+ALR L +NVMIYSQKNY DLD W+R +V+ M GTDSDYEAFDRSQDEK+L Sbjct: 1430 PILRQTERALRELLPENVMIYSQKNYMDLDKWARTWVESMTGTDSDYEAFDRSQDEKVLD 1489 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVEVL+FFLWPE+LI EY LKLMMGCS+GDL +MRFSGE Sbjct: 1490 LEVEVLRFFLWPEDLIREYEELKLMMGCSLGDLGVMRFSGE 1530 Score = 396 bits (1017), Expect(2) = 0.0 Identities = 231/567 (40%), Positives = 327/567 (57%), Gaps = 5/567 (0%) Frame = +1 Query: 310 RRVQFYSRNSLSYEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHA 489 R V FYSR+S Y Y GG H S GW + + + +L L E +DHCL+Q Y +G IG+HA Sbjct: 605 REVAFYSRHSKEYSYTGGSHRSLGWDKALDELIVELGLDESYDHCLIQRYSKGGSIGFHA 664 Query: 490 DDEECYT-NNAVVTLNLVGEAEFSIKCPNGAESLYKLKAGSS--LTMPEGMQSDHKHSVK 660 DDE CY +VVTLNL GEA F +K N + K+K G TM GMQ HKH V+ Sbjct: 665 DDERCYLPGGSVVTLNLHGEAIFEVK-ENTTGKIKKIKLGDGDVYTMGPGMQQSHKHRVE 723 Query: 661 SLSKDRVSLTFRNGILGADQGSD-TLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHM 837 S ++ R S+T RN + + + SEYEED E DE ++ L +NS N+C + ++HM Sbjct: 724 SCTEGRCSVTLRNKTIDYETRQEGNNSEYEEDVAELDEGIEYLKKNSGNMCSLKAFADHM 783 Query: 838 GITREICMSIIHSKMPRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRE 1017 ++ +SI++ P+ + EI+ GG+SV+TL+ + K+LD I RG TTG++R+ Sbjct: 784 QLSIPSVISIVNGVSPQTLREIESGGISVATLVNLSKALDFPVAIHGERGYAETTGDYRK 843 Query: 1018 LVCHADDEHLSHYHGPKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCL 1197 L H+ + G + F+ ALL + I I + + +A L SF G TGV L Sbjct: 844 LHLKITAGHVEPFEGVNSRGGFKEALLLSDGIGIGRFRVDKSKADRLAQSFHNGNTGVLL 903 Query: 1198 NKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMD 1377 K+ +KG A + + T+ GFAGSGKS++ QT+L LVI PRK L D Sbjct: 904 GKY--NKGKIHAEWLDEPKEVLTAFGFAGSGKSHWCQTILKHCAVEKVLVISPRKVLKDD 961 Query: 1378 WRNKVHKSIDVTTFESAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPL 1557 W +K+ K V TFE AF ++IV+DE+GLLPPGY+DLVI + L++LGDPL Sbjct: 962 WTSKISKEHKVVTFEVAF-MDDFGCKDIVIDEIGLLPPGYIDLVIAVHRSRVLVLLGDPL 1020 Query: 1558 QCNYYNKNDDLFLAPERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTW- 1734 Q Y++K D++ L + + F + G+ YL +HRLP N LFE+ G EK V + Sbjct: 1021 QSTYHSKRDNVVLEASQEDVFSRVQGNLPYLCYSHRLPKNCKLFELECMGAECEKRVVYR 1080 Query: 1735 NEKVGNDMRIVASRKRKEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTR 1914 + ++ ++ I A+R KE +G+ T+ ETQGLS + + +DE WA DE VMVA TR Sbjct: 1081 SNRLKDEPVICATRAMKEEKGSGWYTVSETQGLSFKSCLIYLDEHWAKKEDEDVMVALTR 1140 Query: 1915 ARKQLNIVVGKDLKEKLIRHAKSGLLR 1995 +R ++ I LK+ LI AKS LLR Sbjct: 1141 SRGEIGIHASPALKKSLISTAKSTLLR 1167 >gb|ABL14358.1| 194 kDa protein [Grapevine virus A] Length = 1707 Score = 456 bits (1173), Expect(2) = 0.0 Identities = 225/341 (65%), Positives = 266/341 (78%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 +V ++ +E RLA + + E RLAGDPYLK LLSL ++ L+P +THL LS Sbjct: 1190 EVTVMFEESRLAQTVDYEARLAGDPYLKSLLSLYDEIEMEEVEVEEPTALEPMKTHLALS 1249 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 LNE++ +L+ K RE +T+ G T+QIDEVGY ESANPMTHKALYL H +DD ATFM Sbjct: 1250 EKLNELAPFDLKAKEYREQYTDVGRTEQIDEVGYSEESANPMTHKALYLRHTSDDTATFM 1309 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 +SVKKRLRFR+ E N RKY G G+QMF + + TY L +SLPEL+RCE EF +KR+ Sbjct: 1310 MSVKKRLRFRNFEANRRKYRACHGIGQQMFSVFKDTYQLKEIDSLPELERCEMEFMKKRV 1369 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 KS LIE+H+ RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIACF+H+VLCRFG Sbjct: 1370 EKSAGLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG 1429 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TE+ALR L +NVMIYSQKNY DLD W+R +V+ M GTDSDYEAFDRSQDEK+L Sbjct: 1430 PILRQTERALRELLPENVMIYSQKNYMDLDKWARTWVESMTGTDSDYEAFDRSQDEKVLD 1489 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVEVL+FFLWPEELI EY LKLMMGCS+GDLA+MRFSGE Sbjct: 1490 LEVEVLRFFLWPEELIKEYEELKLMMGCSLGDLAVMRFSGE 1530 Score = 390 bits (1003), Expect(2) = 0.0 Identities = 229/568 (40%), Positives = 327/568 (57%), Gaps = 6/568 (1%) Frame = +1 Query: 310 RRVQFYSRNSLSYEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHA 489 R V FYS++S Y YNGG H S GW + + + +L L E +DHCL+Q Y +G IG+HA Sbjct: 605 REVAFYSKHSKEYSYNGGSHRSLGWDKALDELLAELGLDESYDHCLIQRYTKGGSIGFHA 664 Query: 490 DDEECYT-NNAVVTLNLVGEAEFSIK-CPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKS 663 DDE CY +VVTLNL G+A F +K +G KL G TM GMQ HKH V S Sbjct: 665 DDERCYLPGGSVVTLNLHGDAIFEVKENVSGKIQEIKLADGDVYTMGPGMQQTHKHRVVS 724 Query: 664 LSKDRVSLTFRNGILGAD---QGSDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEH 834 ++ R S+T RN + +GS+ SEYEED E DE ++ L +NS N+C + ++H Sbjct: 725 CTEGRCSVTLRNKTTDHETRLEGSN--SEYEEDVAELDEGIEYLKKNSGNMCSLKAFADH 782 Query: 835 MGITREICMSIIHSKMPRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFR 1014 M ++ +SI++ P+ + EI+ GG+SV+TL+ + K+LD I RG TTG++R Sbjct: 783 MQLSIPSVISIVNGASPQTLREIESGGISVATLVNLSKALDFPVSIHGERGYAETTGDYR 842 Query: 1015 ELVCHADDEHLSHYHGPKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVC 1194 +L H+ + G + F+ ALL + I I + + +A L SF G TGV Sbjct: 843 KLHLRITAGHVEPFEGVSSKGGFKEALLLSDGIGIGRFRVDKAKADRLAQSFYNGNTGVL 902 Query: 1195 LNKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCM 1374 L K+ +KG A + + T+ GFAGSGKS++ QT+L LVI PRK L Sbjct: 903 LGKY--NKGKMHAEGLEEPKEVLTAFGFAGSGKSHWCQTILKHCTVDKVLVISPRKVLKD 960 Query: 1375 DWRNKVHKSIDVTTFESAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDP 1554 DW +K+ K V TFE AF ++IV+DE+GLLPPGY+DL+I + L++LGDP Sbjct: 961 DWTSKISKKHKVVTFEVAF-MDDYGCKDIVIDEIGLLPPGYIDLIIAVHRPRVLVLLGDP 1019 Query: 1555 LQCNYYNKNDDLFLAPERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTW 1734 LQ Y++K D++ L + + F + G YL +HRLP N LFE+ G EK V + Sbjct: 1020 LQSTYHSKRDNMVLEASQEDIFSRVHGKLPYLCYSHRLPKNCKLFELECMGAESEKRVVY 1079 Query: 1735 -NEKVGNDMRIVASRKRKEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFT 1911 + ++ ++ I A+R KE +G+ T+ ETQGLS + + +DE W DE +MVA T Sbjct: 1080 RSNRMKDEPVICATRAMKEEKGSGWYTVSETQGLSFKSCLIYLDEHWGKKEDEDIMVALT 1139 Query: 1912 RARKQLNIVVGKDLKEKLIRHAKSGLLR 1995 R+R ++ I V L++ LI AKS LLR Sbjct: 1140 RSRGEIGIHVSPTLRKSLISSAKSMLLR 1167 >gb|AGT17853.1| putative replicase [Grapevine virus A] Length = 1707 Score = 455 bits (1170), Expect(2) = 0.0 Identities = 223/341 (65%), Positives = 265/341 (77%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 D ++ +E RLA++ + E RLAGDPYLK LL+L ++ L+P +THL LS Sbjct: 1190 DTTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEEVEIEEPVALEPTKTHLALS 1249 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 NE++ +L+ K RE +TE G T+QIDE GY+GE+ NPMTHKALYL H +DD ATFM Sbjct: 1250 TMTNELAPFDLKAKEYREQYTEVGRTEQIDEEGYQGEAGNPMTHKALYLRHTSDDTATFM 1309 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 +SVKKRLRFR+ E N RKY G G QMF + + TY L +SLPEL+RCE EF +KRI Sbjct: 1310 MSVKKRLRFRNYEANRRKYRACHGIGHQMFSVFKDTYQLKEIDSLPELERCEMEFMKKRI 1369 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 KS LIEKH+ RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIACF+H+VLCRFG Sbjct: 1370 EKSTGLIEKHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG 1429 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TEKALR L +NVMIYSQKNY DLD W++ +V+ M+GTDSDYEAFDRSQDEK+L Sbjct: 1430 PILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLD 1489 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVEVL+FFLWPEELI EY LKLMMGC++GDLA+MRFSGE Sbjct: 1490 LEVEVLRFFLWPEELIKEYEELKLMMGCALGDLAVMRFSGE 1530 Score = 391 bits (1004), Expect(2) = 0.0 Identities = 224/569 (39%), Positives = 325/569 (57%), Gaps = 7/569 (1%) Frame = +1 Query: 310 RRVQFYSRNSLSYEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHA 489 R V FYSR S Y+YNGG H S GW + + + +L L + +DHCL+Q Y G IG+HA Sbjct: 605 REVAFYSRYSKEYKYNGGTHRSLGWDKALNELVQELGLDDSYDHCLIQRYTAGGSIGFHA 664 Query: 490 DDEECYT-NNAVVTLNLVGEAEFSIK-CPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKS 663 DDE CY +VVT+NL+G+A F ++ +G +L G M GMQ H+H V S Sbjct: 665 DDEPCYLPGGSVVTVNLLGDATFEVRENQSGRIEKKELHDGDVYVMGPGMQQTHEHRVTS 724 Query: 664 LSKDRVSLTFRNGILGAD-QGSDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMG 840 + R S+T RN + + + D SEYEED E DE ++ L +N N+C + ++HM Sbjct: 725 HTDGRCSITLRNKTIDYESRKGDEGSEYEEDKAELDEGIEYLQKNQGNMCSLKAFADHMQ 784 Query: 841 ITREICMSIIHSKMPRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFREL 1020 ++ ++I++ P+ + EI+DGG+S++TL+ + K+LD I RG T G++R L Sbjct: 785 LSIPSVIAIVNGASPQTLREIEDGGISLATLVNLSKALDFPIAIHGERGYAGTPGSYRRL 844 Query: 1021 VCHADDEHLSHYHGPKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLN 1200 H+ + G + F A+L + + + + +A L SF G TGV L Sbjct: 845 HLKITSGHVEPFEGVTSKGGFREAMLLGDGVGLGRFRVDKAKADRLAQSFYNGNTGVLLG 904 Query: 1201 KFQK---HKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALC 1371 K+ K H G + P + + T+ GFAGSGKS++ QT+L LVI PRK L Sbjct: 905 KYNKGKMHTGEIEEP-----KEVLTAFGFAGSGKSHWCQTILKHCSVEKVLVISPRKVLK 959 Query: 1372 MDWRNKVHKSIDVTTFESAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGD 1551 DW K+ K V TFE AF ++IV+DE+GLLPPGY+DLVI + Q TL++LGD Sbjct: 960 DDWVAKISKKHKVVTFEVAF-MDDYGCKDIVIDEIGLLPPGYIDLVIAAHQPRTLVLLGD 1018 Query: 1552 PLQCNYYNKNDDLFLAPERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVT 1731 PLQ Y++K D++ L + + F + G YL +HRLP N NLFE+ G EK V Sbjct: 1019 PLQSTYHSKRDNVVLEASQEDVFNRVQGRLPYLCYSHRLPRNCNLFEIECMGAECEKRVV 1078 Query: 1732 W-NEKVGNDMRIVASRKRKEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAF 1908 + + ++ ++ I A+R KE +G+ T+ ETQGLS + + +DE WA DE VMVA Sbjct: 1079 YRSNRLKDEPTICATRAMKEEKGSGWYTVSETQGLSFKSCLIYLDEHWAKKEDEDVMVAL 1138 Query: 1909 TRARKQLNIVVGKDLKEKLIRHAKSGLLR 1995 TR+R ++ I V LK+ LI +AKS LL+ Sbjct: 1139 TRSRGEIGIHVTPALKKNLINNAKSTLLK 1167 >gb|AAO84267.1| replicase [Grapevine virus A] Length = 1706 Score = 456 bits (1174), Expect(2) = 0.0 Identities = 221/341 (64%), Positives = 270/341 (79%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 +V ++ +E RLA++ + E RLAGDPYLK LLSL ++ L+P +THL LS Sbjct: 1189 EVTVLFEESRLAENVDYEARLAGDPYLKSLLSLYDEIEMDEVEIEEPVALEPVKTHLALS 1248 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 +NE++ EL+ K RE +T+AG T+QIDE GY GE ANPMTHKALYL H +DD ATFM Sbjct: 1249 EKMNELAPFELKAKEYREQYTDAGRTEQIDEEGYSGEEANPMTHKALYLRHTSDDTATFM 1308 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 +SV+KRLRFR+ E N RKY+ G GKQMF + ++TY L +SLP+L+RCE EF +KR+ Sbjct: 1309 MSVRKRLRFRNYEANRRKYKACNGIGKQMFSVFKETYQLKEIDSLPDLERCEMEFMKKRV 1368 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 KS LIE+H+ RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIACF+H+VLCRFG Sbjct: 1369 EKSAGLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG 1428 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TE+ALR L +NVMIYSQKNY DLD W++ +V+ M+GTDSDYEAFDRSQDEK+L Sbjct: 1429 PILRQTERALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLD 1488 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVEVL+FFLWPE+LI EY LKLMMGC++GDLA+MRFSGE Sbjct: 1489 LEVEVLRFFLWPEDLIREYEELKLMMGCALGDLAVMRFSGE 1529 Score = 389 bits (999), Expect(2) = 0.0 Identities = 228/569 (40%), Positives = 321/569 (56%), Gaps = 7/569 (1%) Frame = +1 Query: 310 RRVQFYSRNSLSYEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHA 489 R V FYSR S Y Y GG H S GW + + + +L L E +DHCL+Q Y EG I +HA Sbjct: 604 REVAFYSRYSKQYSYKGGSHHSLGWDKALDELIQELGLDESYDHCLIQRYSEGGSINFHA 663 Query: 490 DDEECYT-NNAVVTLNLVGEAEFSIK-CPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKS 663 DDE CY VVT+NL GEA F +K +G +LK G TM GMQ HKH V S Sbjct: 664 DDEPCYLPGGTVVTVNLNGEAIFELKENTSGKTESKRLKDGDVFTMGAGMQQTHKHKVTS 723 Query: 664 LSKDRVSLTFRNGILGADQGSDTL-SEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMG 840 L+ R S+T RN + + ++ + S+YEED DE ++ L +N N+C + +EHM Sbjct: 724 LTNGRCSITLRNKTVDYEARTEAINSDYEEDVAALDEGIEYLQKNQGNMCSLKAFAEHMQ 783 Query: 841 ITREICMSIIHSKMPRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFREL 1020 ++ +SI++ P+ + EI+ GG+SV+TL+ + ++LD I RG T G +R L Sbjct: 784 LSIPSVISIVNGASPQTLREIEGGGISVATLVNLSRALDFPIAIHGERGYAETPGTYRRL 843 Query: 1021 VCHADDEHLSHYHGPKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLN 1200 H+ + G + + ALL + + I + + +A L SF G TGV L Sbjct: 844 HLKITTGHVEPFDGVISKGGLKEALLLSDGVGIGLFRVDKNKADRLAQSFYNGNTGVLLG 903 Query: 1201 KFQK---HKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALC 1371 K+ K H D P + + T+ GFAGSGKS++ QT+L LVI PRK L Sbjct: 904 KYNKGKMHSEGIDEP-----KEVLTAFGFAGSGKSHWCQTILKHCSVEKALVISPRKVLK 958 Query: 1372 MDWRNKVHKSIDVTTFESAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGD 1551 DW +K+ K V TFE AF +++V+DE+GLLPPGY+DLVI + TL++LGD Sbjct: 959 DDWTSKISKRHKVVTFEVAF-MDDYGCKDVVIDEIGLLPPGYIDLVIAVHRPRTLVLLGD 1017 Query: 1552 PLQCNYYNKNDDLFLAPERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVT 1731 PLQ Y++K D++ L + + F + G YL +HRLP N LFE+ G EK VT Sbjct: 1018 PLQSTYHSKRDNVVLEASQEDIFARIKGQLPYLCYSHRLPKNCRLFELECMGAESEKRVT 1077 Query: 1732 W-NEKVGNDMRIVASRKRKEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAF 1908 + + ++ ++ I A+R KE +G+ T+ ETQGLS + + +DE WA DE VMVA Sbjct: 1078 YRSSRLKDEPVICATRAMKEEKGSGWYTVSETQGLSFKSCLIHLDEHWAKKEDEDVMVAL 1137 Query: 1909 TRARKQLNIVVGKDLKEKLIRHAKSGLLR 1995 TR+R ++ I V LK+ LI AKS LLR Sbjct: 1138 TRSRGEIGINVTNALKKTLIASAKSTLLR 1166 >gb|ABH06983.2| 194 kDa protein [Grapevine virus A] Length = 1707 Score = 458 bits (1179), Expect(2) = 0.0 Identities = 225/341 (65%), Positives = 269/341 (78%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 +V ++ +E RLA++ + E RLAGDPYLK LLSL ++ L+P +THL LS Sbjct: 1190 EVTVMFEESRLAENVDYEARLAGDPYLKSLLSLYDEIEMEEVEIEEPTALEPVKTHLALS 1249 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 LNE++ +L+ K RE +TEAG T+QIDE GYKGE ANPMTHKALYL H +DD ATFM Sbjct: 1250 EKLNELAPFDLKAKEDREQYTEAGRTEQIDEEGYKGEDANPMTHKALYLRHTSDDTATFM 1309 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 +SVKKRLRFR+ E N RKY+ G G+QMF + ++ Y L +SLPEL+RCE EF +KR+ Sbjct: 1310 MSVKKRLRFRNFEANRRKYKACHGIGQQMFSVFKEIYQLKEIDSLPELERCEMEFMKKRV 1369 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 KS LIE+H+ RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIACF+H+VLC+FG Sbjct: 1370 EKSAVLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCKFG 1429 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TEKALR L +NVMIYSQKNY DLD W+R +V+ M GTDSDYEAFDRSQDEK+L Sbjct: 1430 PTLRQTEKALRELLPENVMIYSQKNYMDLDKWARTWVESMTGTDSDYEAFDRSQDEKVLD 1489 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVEVL+FFLWPE+LI EY LKLMMGCS+GDLA+MRFSGE Sbjct: 1490 LEVEVLRFFLWPEDLIREYEELKLMMGCSLGDLAVMRFSGE 1530 Score = 386 bits (992), Expect(2) = 0.0 Identities = 226/567 (39%), Positives = 322/567 (56%), Gaps = 5/567 (0%) Frame = +1 Query: 310 RRVQFYSRNSLSYEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHA 489 R V FYSR+S Y Y G H S GW + + + +L L E +DHCL+Q Y +G IG+HA Sbjct: 605 REVAFYSRHSKEYSYTSGSHRSLGWDKALDELIVELGLDESYDHCLIQRYSKGGSIGFHA 664 Query: 490 DDEECYT-NNAVVTLNLVGEAEFSIKCPNGAESLYKLKAGSS--LTMPEGMQSDHKHSVK 660 DDE CY +VVTLNL GEA F +K N + K+K G TM GMQ HKH V+ Sbjct: 665 DDERCYLPGGSVVTLNLHGEAIFEVK-ENATGKVQKIKLGDGDVYTMGPGMQQTHKHRVE 723 Query: 661 SLSKDRVSLTFRNGILGADQGSD-TLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHM 837 S ++ R S+T RN + + SEYEED E DE ++ L +NS N+C + ++HM Sbjct: 724 SCTEGRCSVTLRNKTTDYETRQEGNNSEYEEDVAELDEGIEYLKKNSGNMCSLKAFADHM 783 Query: 838 GITREICMSIIHSKMPRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRE 1017 ++ +SI++ P+ + EI+ GG+SV+TL+ + K+LD I RG T G++R+ Sbjct: 784 QLSIPSVISIVNGASPQTLREIESGGISVATLVNLSKALDFPVAIHGERGYAETMGDYRK 843 Query: 1018 LVCHADDEHLSHYHGPKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCL 1197 L H+ + G + F+ ALL + I I + + +A L SF G TGV L Sbjct: 844 LHLKITAGHVEPFEGVNSRGGFKEALLLSDGIGIGRFRVDKSKADRLAQSFHNGNTGVLL 903 Query: 1198 NKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMD 1377 K+ +KG A + + T+ GFAGSGKS++ QT+L LVI PRK L D Sbjct: 904 GKY--NKGKIHAEWLDEPKEVLTAFGFAGSGKSHWCQTILKHCAVEKVLVISPRKVLKDD 961 Query: 1378 WRNKVHKSIDVTTFESAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPL 1557 W +K+ K V TFE AF ++IV+DE+GLLPPGY+DLVI + L++LGDPL Sbjct: 962 WTSKISKKHKVVTFEVAF-MDDYGCKDIVIDEIGLLPPGYIDLVIAVHRPRVLVLLGDPL 1020 Query: 1558 QCNYYNKNDDLFLAPERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTW- 1734 Q Y++K D++ L + + F + G+ YL +HRLP N LFE+ G +K + Sbjct: 1021 QSTYHSKRDNVVLEASQEDVFSRVQGNLPYLCYSHRLPKNCTLFELECMGAECDKRIVHR 1080 Query: 1735 NEKVGNDMRIVASRKRKEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTR 1914 + ++ ++ I A+R KE +G+ T+ ETQGLS + + +DE W DE VMVA TR Sbjct: 1081 SNRLKDEPVICATRAMKEEKGSGWYTVSETQGLSFKSCLIYLDEHWGKKEDEDVMVALTR 1140 Query: 1915 ARKQLNIVVGKDLKEKLIRHAKSGLLR 1995 +R ++ I LK+ LI AKS LLR Sbjct: 1141 SRGEIGIHASPALKKSLISTAKSTLLR 1167 >gb|ABH06996.2| replication-related protein [Grapevine virus A] Length = 1707 Score = 456 bits (1173), Expect(2) = 0.0 Identities = 224/341 (65%), Positives = 268/341 (78%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 D ++ +E RLA++ + E RLAGDPYLK LL+L ++ L+P +THL LS Sbjct: 1190 DTTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDVEIEEPVALEPTKTHLALS 1249 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 A NE++ +L+ K RE +T+AG T+QIDE GY+GE+ +PMTHKALYL H +DD ATFM Sbjct: 1250 AKNNELAPFDLKAKEYREQYTDAGRTEQIDEEGYQGETGDPMTHKALYLRHTSDDTATFM 1309 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 +SVKKRLRFR+ E N RKY+ G G QMF + + TY L +SLPEL+RCE EF RKRI Sbjct: 1310 MSVKKRLRFRNYEANRRKYKACHGIGHQMFSVFKDTYQLKEIDSLPELERCEMEFMRKRI 1369 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 KS LIEKH+ RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIACF+H+VLCRFG Sbjct: 1370 EKSTGLIEKHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG 1429 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TEKALR L +NVMIYSQKNY DLD W++ +V+ M+GTDSDYEAFDRSQDEK+L Sbjct: 1430 PILRQTEKALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLD 1489 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVEVL+FFLWPEELI EY LKLMMGC++GDLA+MRFSGE Sbjct: 1490 LEVEVLRFFLWPEELIKEYEELKLMMGCALGDLAVMRFSGE 1530 Score = 389 bits (998), Expect(2) = 0.0 Identities = 224/567 (39%), Positives = 323/567 (56%), Gaps = 5/567 (0%) Frame = +1 Query: 310 RRVQFYSRNSLSYEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHA 489 R V FYS +S Y+YNGG H S GW + + +L L + +DHCL+Q Y G IG+HA Sbjct: 605 REVAFYSNHSREYKYNGGAHRSLGWDRALTELRQELGLDDSYDHCLIQRYTAGGSIGFHA 664 Query: 490 DDEECYT-NNAVVTLNLVGEAEFSIKCPNGAESLYK--LKAGSSLTMPEGMQSDHKHSVK 660 DDE CY +VVT+NL G+A F +K N +E + K L G M Q HKH V Sbjct: 665 DDEPCYLPGGSVVTVNLFGDATFEVK-ENKSEKIEKKELHDGDVYVMGPRKQQTHKHRVT 723 Query: 661 SLSKDRVSLTFRNGILGAD-QGSDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHM 837 S + R S+T RN + + + D SEYEED E DE + L +N N+C + ++HM Sbjct: 724 SHTDGRCSITLRNKTVDYETRRGDDGSEYEEDKAELDEGIDYLQKNQSNMCSLKAFADHM 783 Query: 838 GITREICMSIIHSKMPRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRE 1017 ++ +++++ P+ + EI+DGG+S++TL+ + K+LD I RG T+G++R Sbjct: 784 QLSIPSVIAVVNGASPQTLREIEDGGISLATLVNLSKALDFPIAIHGERGYAETSGSYRR 843 Query: 1018 LVCHADDEHLSHYHGPKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCL 1197 L H+ + G + F+ A+L + + ++ + +A L SF G TGV L Sbjct: 844 LHLKITSGHVEPFEGVTSKGGFKEAMLLGDGVGLGHFRVDKAKADRLAQSFYNGNTGVLL 903 Query: 1198 NKFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMD 1377 K+ +KG A G + TS GFAGSGKS++ QT+L LVI PRK L D Sbjct: 904 GKY--NKGKMHASETEGSMEVLTSFGFAGSGKSHWCQTILKHCSVEKVLVISPRKVLKDD 961 Query: 1378 WRNKVHKSIDVTTFESAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPL 1557 W K+ K V TFE AF ++IV+DE+GLLPPGY+DLVI + Q TL++LGDPL Sbjct: 962 WVAKISKKHKVVTFEVAF-MDDYGCKDIVIDEIGLLPPGYIDLVIAAHQPRTLVLLGDPL 1020 Query: 1558 QCNYYNKNDDLFLAPERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTW- 1734 Q Y++K D++ L + + F + G YL +HRLP N LFE+ G EK V + Sbjct: 1021 QSTYHSKRDNVVLEASQEDVFARIQGRLPYLCYSHRLPRNCKLFELECMGAESEKRVVYR 1080 Query: 1735 NEKVGNDMRIVASRKRKEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTR 1914 + ++ ++ I A+R KE +G+ T+ ETQGLS + + +DE WA DE VMVA TR Sbjct: 1081 SSRLKDEPTICATRAMKEEKGSGWYTVSETQGLSFKSCLIYLDEHWAKKEDEDVMVALTR 1140 Query: 1915 ARKQLNIVVGKDLKEKLIRHAKSGLLR 1995 +R ++ I V LK+ LI +AKS LL+ Sbjct: 1141 SRGEIGIHVTPALKKHLITNAKSTLLK 1167 >ref|NP_619662.1| putative replicase [Grapevine virus A] gi|81937291|sp|Q67704.1|RDRP_GVAIS RecName: Full=RNA replication protein; Includes: RecName: Full=RNA-directed RNA polymerase; Includes: RecName: Full=Helicase gi|1405615|emb|CAA53182.1| putative replicase [Grapevine virus A] Length = 1707 Score = 449 bits (1154), Expect(2) = 0.0 Identities = 219/341 (64%), Positives = 265/341 (77%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 + ++ +E RLA++ + E RLAGDPYLK LL+L ++ L+P +THL LS Sbjct: 1190 ETTVLFEESRLAETVDYEARLAGDPYLKSLLALYDEIEMEDIEIEEPVTLEPTKTHLALS 1249 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 +NE++ +L+ K RE HTEAG T+QIDE GY+GE +PMTHKALYL H +DD ATFM Sbjct: 1250 TKMNELAPFDLKAKEHREQHTEAGRTEQIDENGYQGEVGDPMTHKALYLRHTSDDTATFM 1309 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 +SVKKRLRFR+ E N RKY+ G G QMF + + TY L +SLPEL+RCE EF +KRI Sbjct: 1310 MSVKKRLRFRNYEANRRKYKTCHGIGHQMFSVFKDTYQLKEIDSLPELERCEMEFMKKRI 1369 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 KS LIEKH+ RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIACF+H+VLCRFG Sbjct: 1370 EKSTGLIEKHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG 1429 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TEKALR L + +MIYSQK Y DLD W++ +V+ M+GTDSDYEAFDRSQDEK+L Sbjct: 1430 PILRQTEKALRELLPEKLMIYSQKKYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLD 1489 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVEVL+FFLWPE+LI EY LKLMMGC++GDLA+MRFSGE Sbjct: 1490 LEVEVLRFFLWPEDLIREYEELKLMMGCALGDLAVMRFSGE 1530 Score = 395 bits (1016), Expect(2) = 0.0 Identities = 227/569 (39%), Positives = 325/569 (57%), Gaps = 7/569 (1%) Frame = +1 Query: 310 RRVQFYSRNSLSYEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHA 489 R V FYSR+S Y+YNGG H S GW E + ++ +L L + +DHCL+Q Y G IG+HA Sbjct: 605 REVAFYSRHSKEYKYNGGSHRSLGWDEALNELTQELGLDDSYDHCLIQRYTAGGSIGFHA 664 Query: 490 DDEECYT-NNAVVTLNLVGEAEFSIK-CPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKS 663 DDE CY +VVT+NL G+A F +K +G +L G M GMQ HKH V S Sbjct: 665 DDEPCYLPGGSVVTVNLHGDATFEVKENQSGKIEKKELHDGDVYVMGPGMQQTHKHRVTS 724 Query: 664 LSKDRVSLTFRNGILGAD-QGSDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMG 840 + R S+T RN + + + D SEYEED E DE + L +N N+C + ++HM Sbjct: 725 HTDGRCSITLRNKTVDYEARKGDEDSEYEEDKAELDEGIDYLQKNQGNMCSLKAFADHMQ 784 Query: 841 ITREICMSIIHSKMPRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFREL 1020 ++ ++I++ P+ + EI+DGG S++TL+ + K+LD I RG T G++R L Sbjct: 785 LSTPSVIAIVNGASPQTLREIEDGGYSLATLVNLSKALDFPIAIHGERGYAETPGSYRRL 844 Query: 1021 VCHADDEHLSHYHGPKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLN 1200 H+ + G + F A+L + + ++ + +A L SF G TGV L Sbjct: 845 HLKITSGHVEPFEGVTSKGGFREAMLLGDGVGVGHFRVDKAKADRLAQSFYNGNTGVLLG 904 Query: 1201 KFQK---HKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALC 1371 K+ K H G + P + + T+ GFAGSGKS++ QT+L LVI PRK L Sbjct: 905 KYNKGKMHTGEIEEP-----KEVLTAFGFAGSGKSHWCQTILKHCSVEKVLVISPRKVLR 959 Query: 1372 MDWRNKVHKSIDVTTFESAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGD 1551 DW K+ K V TFE AF ++IV+DE+GLLPPGY+DLVI + Q TL++LGD Sbjct: 960 DDWVAKISKKHRVVTFEVAF-MDDYGCKDIVIDEIGLLPPGYIDLVIAAHQPRTLVLLGD 1018 Query: 1552 PLQCNYYNKNDDLFLAPERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVT 1731 PLQ Y++K D++ L + + F + G YL +HRLP N LFE+ G EK V Sbjct: 1019 PLQSTYHSKRDNVVLEASQEDVFNRVRGKLPYLCYSHRLPRNCKLFEIECMGAESEKRVV 1078 Query: 1732 W-NEKVGNDMRIVASRKRKEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAF 1908 + + ++ ++ I A+R KE +G+ T+ ETQGLS + + +DE WA DE VMVA Sbjct: 1079 YRSNRLKDEPTICATRAMKEEKGSGWYTVSETQGLSFKSCLIYLDEHWAKKEDEDVMVAL 1138 Query: 1909 TRARKQLNIVVGKDLKEKLIRHAKSGLLR 1995 TR+R ++ I V LK+KLI +AKS LL+ Sbjct: 1139 TRSRGEIGIHVTPALKKKLITNAKSTLLK 1167 >gb|ABH06992.2| 194 kDa protein [Grapevine virus A] Length = 1707 Score = 457 bits (1176), Expect(2) = 0.0 Identities = 224/341 (65%), Positives = 270/341 (79%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 +V ++ +E RLA++ + E RLAGDPYLK LLSL ++ L+P +THL LS Sbjct: 1190 EVTVMFEESRLAETVDYEARLAGDPYLKSLLSLYDEIEMDEIEMEEPVVLEPIKTHLALS 1249 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 LNE++ +L+ K RE +TEAG T+QIDE GYKGE+ANPMTHKALY H +DD ATF+ Sbjct: 1250 EKLNELAPFDLKAKEHREQYTEAGRTEQIDEEGYKGENANPMTHKALYQRHTSDDTATFL 1309 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 +SVKKRLRFR+ E N RKY+ G G+QMF + ++ Y L +SLPEL+RCE EF +KR+ Sbjct: 1310 MSVKKRLRFRNYEANRRKYKACHGIGQQMFSVFKEIYQLKEIDSLPELERCEMEFMKKRV 1369 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 KS LIE+H+ RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIACF+H+VLCRFG Sbjct: 1370 EKSAGLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG 1429 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TE+ALR L +NVMIYSQKNY DLD W+R +V+GM GTDSDYEAFDRSQDEK+L Sbjct: 1430 PILRQTERALRELLPENVMIYSQKNYMDLDKWARTWVEGMTGTDSDYEAFDRSQDEKVLD 1489 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVEVL+FFLWPE+LI EY LKLMMGCS+GDLA+MRFSGE Sbjct: 1490 LEVEVLRFFLWPEDLIREYEELKLMMGCSLGDLAVMRFSGE 1530 Score = 386 bits (992), Expect(2) = 0.0 Identities = 228/566 (40%), Positives = 320/566 (56%), Gaps = 4/566 (0%) Frame = +1 Query: 310 RRVQFYSRNSLSYEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHA 489 R FYSR S Y Y GG H S GW + + + +L L E +DHCL+Q Y +G IG+HA Sbjct: 605 REAAFYSRYSKEYSYTGGSHRSLGWDKALDELVAELGLDESYDHCLIQRYSKGGSIGFHA 664 Query: 490 DDEECYT-NNAVVTLNLVGEAEFSIK-CPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKS 663 DDE CY +VVTLNL GEA F +K G KLK G TM GMQ HKH V S Sbjct: 665 DDESCYLPGGSVVTLNLHGEAIFEVKENATGKIEQIKLKDGDVYTMGPGMQQSHKHRVVS 724 Query: 664 LSKDRVSLTFRNGILGADQGSD-TLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMG 840 ++ R S+T RN + + SEYEED E DE ++ L +NS N+C + ++HM Sbjct: 725 CTEGRCSVTLRNKTTDYETRREGNNSEYEEDVAELDEGIEYLQKNSGNMCSLKAFADHMQ 784 Query: 841 ITREICMSIIHSKMPRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFREL 1020 ++ +SI++ P+ + EI+ GG+SV+TL+ + K+LD I RG T G++R+L Sbjct: 785 LSIPSVISIVNGASPQTLREIESGGISVATLVNLSKALDFPVAIHGERGYAETAGDYRKL 844 Query: 1021 VCHADDEHLSHYHGPKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLN 1200 H+ G + F+ ALL + I I + + +A L SF G TGV L Sbjct: 845 HLKITAGHVEPLDGVNSKGGFKEALLLSDGIGIGRFRSDKSKADRLAQSFYNGNTGVLLG 904 Query: 1201 KFQKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMDW 1380 K+ +KG A + + T+ GFAGSGKS++ QT+L LVI PRK L DW Sbjct: 905 KY--NKGKMHAEWLEEPKEVLTAFGFAGSGKSHWCQTILKHCAVEKVLVISPRKVLKDDW 962 Query: 1381 RNKVHKSIDVTTFESAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPLQ 1560 +K+ K V TFE AF ++IV+DE+GLLPPGY+DLVI + L++LGDPLQ Sbjct: 963 TSKISKKHKVVTFEVAF-MDDYGCKDIVIDEIGLLPPGYIDLVIAVHRPRVLVLLGDPLQ 1021 Query: 1561 CNYYNKNDDLFLAPERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTW-N 1737 Y++K D++ L + + F + G+ YL +HRLP N +FE+ G EK V + + Sbjct: 1022 STYHSKRDNVVLEASQEDIFSRVQGNLPYLCYSHRLPKNCKVFELECMGAECEKRVVYRS 1081 Query: 1738 EKVGNDMRIVASRKRKEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTRA 1917 ++ ++ I A+R KE +G+ T+ ETQGLS + + +DE W DE VMVA TR+ Sbjct: 1082 NRLKDEPVICATRAMKEEKGSGWCTVSETQGLSFKSCLIYLDEHWGKKEDEDVMVALTRS 1141 Query: 1918 RKQLNIVVGKDLKEKLIRHAKSGLLR 1995 R ++ I V LK+ LI AKS LL+ Sbjct: 1142 RGEIGIHVSPALKKTLISTAKSTLLK 1167 >gb|AAO17778.1| RNA-dependent RNA polymerase [Grapevine virus A] Length = 1707 Score = 452 bits (1164), Expect(2) = 0.0 Identities = 220/341 (64%), Positives = 269/341 (78%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 +V ++ +E RLA++ + E RLAGDPYLK LLSL ++ L+P +THL LS Sbjct: 1190 EVTVLFEESRLAENVDYEARLAGDPYLKSLLSLYDEIEMDEVEIEEPVALEPVKTHLALS 1249 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 +NE++ EL+ K RE +T+AG T+QIDE GY GE ANPMTHKALYL H +DD ATFM Sbjct: 1250 EKMNELAPFELKAKEYREQYTDAGRTEQIDEEGYSGEEANPMTHKALYLKHTSDDTATFM 1309 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 +SV+KRLRFR+ E N RK + G GKQMF + ++TY L +SLP+L+RCE EF +KR+ Sbjct: 1310 MSVRKRLRFRNYEANRRKSKACNGIGKQMFSVFKETYQLKEIDSLPDLERCEMEFMKKRV 1369 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 KS LIE+H+ RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIACF+H+VLCRFG Sbjct: 1370 EKSAGLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG 1429 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TE+ALR L +NVMIYSQKNY DLD W++ +V+ M+GTDSDYEAFDRSQDEK+L Sbjct: 1430 PILRQTERALRELLPENVMIYSQKNYMDLDKWAKTWVESMMGTDSDYEAFDRSQDEKVLD 1489 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVEVL+FFLWPE+LI EY LKLMMGC++GDLA+MRFSGE Sbjct: 1490 LEVEVLRFFLWPEDLIREYEELKLMMGCALGDLAVMRFSGE 1530 Score = 389 bits (999), Expect(2) = 0.0 Identities = 228/569 (40%), Positives = 321/569 (56%), Gaps = 7/569 (1%) Frame = +1 Query: 310 RRVQFYSRNSLSYEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHA 489 R V FYSR S Y Y GG H S GW + + + +L L E +DHCL+Q Y EG I +HA Sbjct: 605 REVAFYSRYSKQYSYKGGSHHSLGWDKALDELIQELGLDESYDHCLIQRYSEGGSINFHA 664 Query: 490 DDEECYT-NNAVVTLNLVGEAEFSIK-CPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKS 663 DDE CY VVT+NL GEA F +K +G +LK G TM GMQ HKH V S Sbjct: 665 DDEPCYLPGGTVVTVNLNGEAIFELKENTSGKTESKRLKDGDVFTMGAGMQQTHKHKVTS 724 Query: 664 LSKDRVSLTFRNGILGADQGSDTL-SEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMG 840 L+ R S+T RN + + ++ + S+YEED DE ++ L +N N+C + +EHM Sbjct: 725 LTNGRCSITLRNKTVDYEARTEAINSDYEEDVAALDEGIEYLQKNQGNMCSLKAFAEHMQ 784 Query: 841 ITREICMSIIHSKMPRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFREL 1020 ++ +SI++ P+ + EI+ GG+SV+TL+ + ++LD I RG T G +R L Sbjct: 785 LSIPSVISIVNGASPQTLREIEGGGISVATLVNLSRALDFPIAIHGERGYAETPGTYRRL 844 Query: 1021 VCHADDEHLSHYHGPKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLN 1200 H+ + G + + ALL + + I + + +A L SF G TGV L Sbjct: 845 HLKITTGHVEPFDGVISKGGLKEALLLSDGVGIGLFRVDKNKADRLAQSFYNGNTGVLLG 904 Query: 1201 KFQK---HKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALC 1371 K+ K H D P + + T+ GFAGSGKS++ QT+L LVI PRK L Sbjct: 905 KYNKGKMHSEGIDEP-----KEVLTAFGFAGSGKSHWCQTILKHCSVEKALVISPRKVLK 959 Query: 1372 MDWRNKVHKSIDVTTFESAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGD 1551 DW +K+ K V TFE AF +++V+DE+GLLPPGY+DLVI + TL++LGD Sbjct: 960 DDWTSKISKRHKVVTFEVAF-MDDYGCKDVVIDEIGLLPPGYIDLVIAVHRPRTLVLLGD 1018 Query: 1552 PLQCNYYNKNDDLFLAPERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVT 1731 PLQ Y++K D++ L + + F + G YL +HRLP N LFE+ G EK VT Sbjct: 1019 PLQSTYHSKRDNVVLEASQEDIFARIKGQLPYLCYSHRLPKNCRLFELECMGAESEKRVT 1078 Query: 1732 W-NEKVGNDMRIVASRKRKEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAF 1908 + + ++ ++ I A+R KE +G+ T+ ETQGLS + + +DE WA DE VMVA Sbjct: 1079 YRSSRLKDEPVICATRAMKEEKGSGWYTVSETQGLSFKSCLIHLDEHWAKKEDEDVMVAL 1138 Query: 1909 TRARKQLNIVVGKDLKEKLIRHAKSGLLR 1995 TR+R ++ I V LK+ LI AKS LLR Sbjct: 1139 TRSRGEIGINVTNALKKTLIASAKSTLLR 1167 >gb|ABH06988.2| 194 kDa protein [Grapevine virus A] Length = 1707 Score = 460 bits (1183), Expect(2) = 0.0 Identities = 226/341 (66%), Positives = 270/341 (79%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 +V ++ +E RLA++ + E RLAGDPYLK LLSL ++ L+P +THL LS Sbjct: 1190 EVVVMFEESRLAETVDYEARLAGDPYLKSLLSLYDEIEMDEVEMEEPVALEPIKTHLALS 1249 Query: 2183 AGLNEVSVGELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLHHKNDDVATFM 2362 LNE++ +L+ K RE +TEAG T+QIDE GYKGE+ANPMTHKALYL H +DD ATFM Sbjct: 1250 EKLNELAPFDLKAKEYREQYTEAGRTEQIDEEGYKGENANPMTHKALYLRHTSDDTATFM 1309 Query: 2363 LSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDRCEAEFTRKRI 2542 +SVKKRLRFR+ E N RKY G G+QMF + ++ Y L +SLPEL+RCE EF +KR+ Sbjct: 1310 MSVKKRLRFRNFEANRRKYRACHGIGQQMFSVFKEIYQLKEIDSLPELERCEMEFMKKRV 1369 Query: 2543 AKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIACFSHAVLCRFG 2722 KS LIE+H+ RSDPDWPSNYLKIFLKQQ CTKMEKRGVDAKAGQTIACF+H+VLCRFG Sbjct: 1370 EKSAGLIEQHAGRSDPDWPSNYLKIFLKQQTCTKMEKRGVDAKAGQTIACFAHSVLCRFG 1429 Query: 2723 PQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAFDRSQDEKILS 2902 P LR+TE+ALR L +NVMIYSQKNY DLD W+R +V+GM GTDSDYEAFDRSQDEK+L Sbjct: 1430 PILRQTERALRELLPENVMIYSQKNYMDLDKWARTWVEGMTGTDSDYEAFDRSQDEKVLD 1489 Query: 2903 FEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 EVEVL+FFLWPE+LI EY LKLMMGCS+GDLA+MRFSGE Sbjct: 1490 LEVEVLRFFLWPEDLIREYEELKLMMGCSLGDLAVMRFSGE 1530 Score = 380 bits (975), Expect(2) = 0.0 Identities = 223/564 (39%), Positives = 323/564 (57%), Gaps = 6/564 (1%) Frame = +1 Query: 322 FYSRNSLSYEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHADDEE 501 FYS S Y Y GG H S GW + + + +L L E +DHCL+Q Y +G IG+HADDE Sbjct: 609 FYSGYSKEYSYTGGSHRSLGWDKALDELVAELGLDESYDHCLIQRYSKGGSIGFHADDER 668 Query: 502 CYT-NNAVVTLNLVGEAEFSIK-CPNGAESLYKLKAGSSLTMPEGMQSDHKHSVKSLSKD 675 CY +VVTLNL GEA F +K G K++ G TM GMQ HKH V S ++ Sbjct: 669 CYLPGGSVVTLNLHGEAIFEVKENATGKIQQIKMRDGDVYTMGPGMQQTHKHRVVSCTEG 728 Query: 676 RVSLTFRNGILGAD---QGSDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMGIT 846 R S+T RN + +G++ SEYEED E DE ++ L +NS N+C + ++HM ++ Sbjct: 729 RCSVTLRNKTTDYETRLEGNN--SEYEEDVAELDEGIEYLQKNSGNMCSLKAFADHMQLS 786 Query: 847 REICMSIIHSKMPRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRELVC 1026 +SI++ P+ + EI+ GG+SV+TL+ + K+LD I + RG T G++R+L Sbjct: 787 IPSVISIVNGASPQTLREIESGGISVATLVNLSKALDFPVAIHSERGYAETVGDYRKLHL 846 Query: 1027 HADDEHLSHYHGPKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLNKF 1206 H+ + G + F+ ALL + I I + + +A L SF G TGV L K+ Sbjct: 847 KITAGHVEPFDGVNSKGGFKEALLLSDGIGIGRFRVDKNKADRLARSFYNGNTGVLLGKY 906 Query: 1207 QKHKGSEDAPVGTGKERLFTSLGFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMDWRN 1386 +KG A + + T+ GFAGSGKS++ QT+L LVI PRK L DW + Sbjct: 907 --NKGKMHAEWLEEPKEVLTAFGFAGSGKSHWCQTILKHCAVEKVLVISPRKVLKDDWTS 964 Query: 1387 KVHKSIDVTTFESAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPLQCN 1566 K+ K V TFE AF ++IV+DE+GLLPPGY+DLVI + L++LGDPLQ Sbjct: 965 KISKKHKVVTFEVAF-MDDYGCKDIVIDEIGLLPPGYIDLVIAVHRPRVLVLLGDPLQST 1023 Query: 1567 YYNKNDDLFLAPERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTW-NEK 1743 Y++K D++ L + + F + G+ YL +HRLP N +FE+ G +K V + + + Sbjct: 1024 YHSKRDNVVLEASQEDIFSRVQGNLPYLCYSHRLPKNCKVFELECMGAECDKRVVYRSNR 1083 Query: 1744 VGNDMRIVASRKRKEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTRARK 1923 + ++ I A+R KE +G+ T+ ETQGLS + + +DE W DE VMVA TR+R Sbjct: 1084 LKDEPVICATRAMKEEKGSGWYTVSETQGLSFKSCLIYLDEHWGKKEDEDVMVALTRSRG 1143 Query: 1924 QLNIVVGKDLKEKLIRHAKSGLLR 1995 ++ I V LK+ L+ AKS LL+ Sbjct: 1144 EIGIHVSPALKKTLMSSAKSTLLK 1167 >ref|YP_006590065.1| replicase [Grapevine virus F] gi|401620150|gb|AFP95341.1| replicase [Grapevine virus F] Length = 1727 Score = 445 bits (1144), Expect(2) = 0.0 Identities = 220/351 (62%), Positives = 270/351 (76%), Gaps = 10/351 (2%) Frame = +2 Query: 2003 DVELIEKEQRLADSDEMEERLAGDPYLKGLLSLLEDXXXXXXXXXXXXXLQPERTHLYLS 2182 + E + E RLA+++E EE+L GDPYLKG+L LL++ +P +THL+LS Sbjct: 1198 NAEPVFTEARLANTEEYEEKLMGDPYLKGMLRLLQEEEIEEEECEEPMAPEPVKTHLFLS 1257 Query: 2183 AGLNEVSVG----------ELREKMTREAHTEAGVTDQIDEVGYKGESANPMTHKALYLH 2332 G+NE++ +L ++ RE T AG+T QIDE+GY G++ NP THKALYLH Sbjct: 1258 EGVNEMAPFMFVNQSGQRVKLGDRFNREQKTTAGLTAQIDEMGYAGQNENPCTHKALYLH 1317 Query: 2333 HKNDDVATFMLSVKKRLRFRDAEKNSRKYEKNKGFGKQMFKILQQTYNLVHPNSLPELDR 2512 HK D ATFMLSV+KRLRFRD EKN +YEK+KG G+QMF +L++TY+ +SLP L++ Sbjct: 1318 HKMDXAATFMLSVRKRLRFRDPEKNRARYEKHKGIGRQMFDVLKKTYHWTSIDSLPPLEK 1377 Query: 2513 CEAEFTRKRIAKSRNLIEKHSYRSDPDWPSNYLKIFLKQQVCTKMEKRGVDAKAGQTIAC 2692 EA+F +KR+ KS L+E+H+ RSDPDWPSN +KIFLKQQVCTK+EKRGVDAKAGQTIAC Sbjct: 1378 AEADFMKKRLNKSAALLERHNIRSDPDWPSNIIKIFLKQQVCTKLEKRGVDAKAGQTIAC 1437 Query: 2693 FSHAVLCRFGPQLRRTEKALRAQLGDNVMIYSQKNYTDLDNWSRLYVDGMIGTDSDYEAF 2872 FSHAVLC+FGP +R+TE+ LR L NVMIYSQKNY+DLD W++ YVD M+GTDSDYEAF Sbjct: 1438 FSHAVLCKFGPIMRQTERKLRELLPPNVMIYSQKNYSDLDVWAKTYVDTMVGTDSDYEAF 1497 Query: 2873 DRSQDEKILSFEVEVLKFFLWPEELINEYVTLKLMMGCSMGDLAIMRFSGE 3025 DRSQDEKIL EVEVLKFFLWPEELI EYV LKL M CSMG+LAIMRFSGE Sbjct: 1498 DRSQDEKILDLEVEVLKFFLWPEELIREYVELKLQMSCSMGNLAIMRFSGE 1548 Score = 363 bits (933), Expect(2) = 0.0 Identities = 220/563 (39%), Positives = 314/563 (55%), Gaps = 5/563 (0%) Frame = +1 Query: 322 FYSRNSLSYEYNGGKHASKGWPEWVQVISDKLNLKEDFDHCLLQIYDEGAQIGYHADDEE 501 FYS+ S Y Y GG H S+G PE + + + L E++DHCL+Q Y++ I +HADDE+ Sbjct: 619 FYSKYSTGYTYTGGSHISQGMPESLVELRRSMGLGEEYDHCLVQKYEKDGAIPFHADDEK 678 Query: 502 CYT-NNAVVTLNLVGEAEFSIKCPNGAESLYK--LKAGSSLTMPEGMQSDHKHSVKSLSK 672 CY + VVTLN+ G AEF +K NG E +++ L+ G L MPEG+Q ++KHSV S+ Sbjct: 679 CYLPGSCVVTLNMHGTAEFMLK-ENGKEEVHRVTLEDGDVLVMPEGVQENYKHSVLVKSE 737 Query: 673 DRVSLTFRNGILGADQGSDTLSEYEEDGVEFDESLQILSRNSKNLCCIDRISEHMGITRE 852 R+SLTFRN + SD +S+YEED + D+ L+ + N NLC + I++H+ + Sbjct: 738 GRISLTFRNKTVDY-MNSDAVSDYEEDAPDVDDGLRSIQANRANLCTLQCIADHIKLDLP 796 Query: 853 ICMSIIHSKMPRAIEEIKDGGMSVSTLLQILKSLDVAAYIQNSRGCVSTTGNFRELVCHA 1032 I ++ +++ P I E+ GG ++ T + + +D+ I G + T GNF++L Sbjct: 797 ILVARLNATNPEYISELSKGGPTLPTFINLCAKMDIPLQISGVHGGLQTRGNFKKLCVFM 856 Query: 1033 DDEHLSHYHGPKNMVNFENALLFNADISICYYNYSEKRAKLLITSFEEGFTGVCLNKFQK 1212 ++H+ N +A + + + + + A+ L S EG TG+ LNKF++ Sbjct: 857 GEDHVERVEETVGRNNAYDAFSLHPNSGRGTFYPNREYAEKLSESMFEGHTGILLNKFKR 916 Query: 1213 HKGSEDAPVGTGKERLFTSL-GFAGSGKSYYPQTLLGTGQYLDTLVIVPRKALCMDWRNK 1389 K KE F S GFAGSGKSYYPQT+L + LVI PRKAL DW +K Sbjct: 917 GKS---VIKDVRKEIKFVSFFGFAGSGKSYYPQTVLQHTFGIRALVISPRKALAADWSSK 973 Query: 1390 VHKSIDVTTFESAFKKGKRHYENIVVDEVGLLPPGYLDLVIGSFQYDTLLILGDPLQCNY 1569 + V TFE A + + + IVVDE+GL PPGYLDL+ + TL++LGDPLQ Y Sbjct: 974 IGSRAKVVTFEKAVVE-EEVFSCIVVDELGLYPPGYLDLICLLHEPSTLVLLGDPLQGTY 1032 Query: 1570 YNKNDDLFLAPERVNPFKLLSGSCTYLFKTHRLPCNQNLFEVPSHGERVEKYVTWNEKVG 1749 YNK+D + LA N F L GS YL +HRL + F++ +HG +K+ Sbjct: 1033 YNKDDRIKLATVSHNVFARLEGSLPYLMYSHRLSKSNRTFDIDTHGNLESAGSQRVKKLD 1092 Query: 1750 NDM-RIVASRKRKEIEGANASTIGETQGLSLQRANLLIDEDWALLSDEGVMVAFTRARKQ 1926 M I A+R KE A T+ ETQGLS + +LID+DWAL D V+VAFTRAR Sbjct: 1093 TKMPTIYAARATKESAEGTAYTVSETQGLSFKDVQVLIDKDWALKEDGDVIVAFTRARGT 1152 Query: 1927 LNIVVGKDLKEKLIRHAKSGLLR 1995 + + L AKS +LR Sbjct: 1153 TKYMCSDSDMDMLKARAKSEVLR 1175