BLASTX nr result
ID: Mentha25_contig00009139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00009139
(431 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004960540.1| PREDICTED: uncharacterized protein LOC101780... 66 4e-09
gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana] 66 4e-09
ref|XP_006477302.1| PREDICTED: general transcription factor IIH ... 66 6e-09
ref|XP_002439126.1| hypothetical protein SORBIDRAFT_09g000940 [S... 66 6e-09
gb|AFW75001.1| REX1 DNA Repair family protein [Zea mays] 65 7e-09
gb|AFW74999.1| REX1 DNA Repair family protein, partial [Zea mays] 65 7e-09
ref|NP_001148022.1| REX1 DNA Repair family protein [Zea mays] gi... 65 7e-09
ref|XP_007040007.1| Nucleotide excision repair, TFIIH, subunit T... 65 1e-08
ref|XP_006363721.1| PREDICTED: general transcription factor IIH ... 64 2e-08
ref|XP_002266482.1| PREDICTED: general transcription factor IIH ... 64 2e-08
gb|EMT14713.1| General transcription factor IIH subunit 5 [Aegil... 64 2e-08
ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arab... 64 2e-08
ref|XP_006368720.1| hypothetical protein POPTR_0001s08090g [Popu... 64 2e-08
ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutr... 64 3e-08
ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like ... 64 3e-08
ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA... 64 3e-08
dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare] 63 4e-08
ref|XP_006303055.1| hypothetical protein CARUB_v10021214mg, part... 62 6e-08
ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group] g... 62 6e-08
ref|NP_001054876.2| Os05g0198700 [Oryza sativa Japonica Group] g... 62 6e-08
>ref|XP_004960540.1| PREDICTED: uncharacterized protein LOC101780092 [Setaria italica]
Length = 70
Score = 66.2 bits (160), Expect = 4e-09
Identities = 29/37 (78%), Positives = 35/37 (94%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKGL+ISCDIPMAQFIINLNAS PP+++FI+ +
Sbjct: 1 MVNAIKGLFISCDIPMAQFIINLNASMPPSERFIVHM 37
>gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]
Length = 113
Score = 66.2 bits (160), Expect = 4e-09
Identities = 39/88 (44%), Positives = 51/88 (57%)
Frame = +2
Query: 167 CWSFQGRSSLALLPSVATAQPRIRYQALLPSLALTQPPRVTRPARSRTLVIMVNAIKGLY 346
C+SF R S PS+ RYQ S + Q +++MVNAIKG++
Sbjct: 6 CFSFVIRLSYKANPSLLYCDNNRRYQDY--SCFVLQ------------VLLMVNAIKGVF 51
Query: 347 ISCDIPMAQFIINLNASQPPAQKFIIQV 430
+SCDIPM QFI+N+N S PP+QKFII V
Sbjct: 52 VSCDIPMTQFIVNMNNSMPPSQKFIIHV 79
>ref|XP_006477302.1| PREDICTED: general transcription factor IIH subunit 5-like isoform
X1 [Citrus sinensis] gi|568846947|ref|XP_006477303.1|
PREDICTED: general transcription factor IIH subunit
5-like isoform X2 [Citrus sinensis]
gi|568846949|ref|XP_006477304.1| PREDICTED: general
transcription factor IIH subunit 5-like isoform X3
[Citrus sinensis]
Length = 70
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKGL+ISCDIPMAQFIIN+NAS P +QKFII +
Sbjct: 1 MVNAIKGLFISCDIPMAQFIINMNASMPQSQKFIIHI 37
>ref|XP_002439126.1| hypothetical protein SORBIDRAFT_09g000940 [Sorghum bicolor]
gi|241944411|gb|EES17556.1| hypothetical protein
SORBIDRAFT_09g000940 [Sorghum bicolor]
Length = 70
Score = 65.9 bits (159), Expect = 6e-09
Identities = 28/37 (75%), Positives = 35/37 (94%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKGL+ISCDIPMAQFI+NLNAS PP+++FI+ +
Sbjct: 1 MVNAIKGLFISCDIPMAQFIVNLNASMPPSERFIVHM 37
>gb|AFW75001.1| REX1 DNA Repair family protein [Zea mays]
Length = 154
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/37 (72%), Positives = 35/37 (94%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKGL+ISCD+PMAQFI+NLNAS PP+++FI+ +
Sbjct: 85 MVNAIKGLFISCDVPMAQFIVNLNASMPPSERFIVHM 121
>gb|AFW74999.1| REX1 DNA Repair family protein, partial [Zea mays]
Length = 132
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/37 (72%), Positives = 35/37 (94%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKGL+ISCD+PMAQFI+NLNAS PP+++FI+ +
Sbjct: 63 MVNAIKGLFISCDVPMAQFIVNLNASMPPSERFIVHM 99
>ref|NP_001148022.1| REX1 DNA Repair family protein [Zea mays]
gi|195615234|gb|ACG29447.1| REX1 DNA Repair family
protein [Zea mays] gi|195628074|gb|ACG35867.1| REX1 DNA
Repair family protein [Zea mays]
gi|195639980|gb|ACG39458.1| REX1 DNA Repair family
protein [Zea mays] gi|413942353|gb|AFW75002.1| REX1 DNA
Repair family protein [Zea mays]
Length = 70
Score = 65.5 bits (158), Expect = 7e-09
Identities = 27/37 (72%), Positives = 35/37 (94%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKGL+ISCD+PMAQFI+NLNAS PP+++FI+ +
Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPPSERFIVHM 37
>ref|XP_007040007.1| Nucleotide excision repair, TFIIH, subunit TTDA isoform 1
[Theobroma cacao] gi|590677408|ref|XP_007040008.1|
Nucleotide excision repair, TFIIH, subunit TTDA isoform
1 [Theobroma cacao] gi|508777252|gb|EOY24508.1|
Nucleotide excision repair, TFIIH, subunit TTDA isoform
1 [Theobroma cacao] gi|508777253|gb|EOY24509.1|
Nucleotide excision repair, TFIIH, subunit TTDA isoform
1 [Theobroma cacao]
Length = 70
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNA KGL+ISCDIPMAQFI+NLNAS P +QKFII V
Sbjct: 1 MVNATKGLFISCDIPMAQFIVNLNASMPASQKFIIHV 37
>ref|XP_006363721.1| PREDICTED: general transcription factor IIH subunit 5-like [Solanum
tuberosum]
Length = 70
Score = 64.3 bits (155), Expect = 2e-08
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNA+KGLY+SCDIPM QFIIN+NAS P +QKFII V
Sbjct: 1 MVNAVKGLYLSCDIPMTQFIINMNASLPQSQKFIIHV 37
>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
product [Vitis vinifera]
Length = 70
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNA KGL+ISCDIPMAQFIIN+NAS P +QKFII V
Sbjct: 1 MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHV 37
>gb|EMT14713.1| General transcription factor IIH subunit 5 [Aegilops tauschii]
Length = 70
Score = 63.9 bits (154), Expect = 2e-08
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKGL+ISCDIPMAQFI+N+NAS P ++KFI+ +
Sbjct: 1 MVNAIKGLFISCDIPMAQFIVNMNASMPASEKFIVHI 37
>ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arabidopsis lyrata subsp.
lyrata] gi|297335775|gb|EFH66192.1| hypothetical protein
ARALYDRAFT_471390 [Arabidopsis lyrata subsp. lyrata]
Length = 71
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKG++ISCDIPM QFI+N+N S PP+QKFII V
Sbjct: 1 MVNAIKGVFISCDIPMTQFIVNMNNSMPPSQKFIIHV 37
>ref|XP_006368720.1| hypothetical protein POPTR_0001s08090g [Populus trichocarpa]
gi|566147875|ref|XP_006368721.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|566147877|ref|XP_006368722.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346807|gb|ERP65289.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346808|gb|ERP65290.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346809|gb|ERP65291.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
Length = 70
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNA KGL+ISCDIPMAQFIINLNAS P +QKFII +
Sbjct: 1 MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHI 37
>ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutrema salsugineum]
gi|557095010|gb|ESQ35592.1| hypothetical protein
EUTSA_v10009271mg [Eutrema salsugineum]
Length = 70
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKG++ISCDIPMAQFI+N+N+S P +QKFII V
Sbjct: 1 MVNAIKGVFISCDIPMAQFIVNMNSSMPSSQKFIIHV 37
>ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
distachyon]
Length = 457
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/37 (72%), Positives = 34/37 (91%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKGL+ISCD+PMAQFI+NLNAS P ++KFI+ +
Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPASEKFIVHM 37
>ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA [Arabidopsis
thaliana] gi|38566546|gb|AAR24163.1| At1g12400
[Arabidopsis thaliana] gi|40823747|gb|AAR92302.1|
At1g12400 [Arabidopsis thaliana]
gi|332190754|gb|AEE28875.1| nucleotide excision repair,
TFIIH, subunit TTDA [Arabidopsis thaliana]
Length = 71
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKG+++SCDIPM QFI+N+N S PP+QKFII V
Sbjct: 1 MVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHV 37
>dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 71
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKGL+ISCDIPMAQFI+N+NAS P + KFI+ +
Sbjct: 2 MVNAIKGLFISCDIPMAQFIVNMNASMPASDKFIVHI 38
>ref|XP_006303055.1| hypothetical protein CARUB_v10021214mg, partial [Capsella rubella]
gi|482571765|gb|EOA35953.1| hypothetical protein
CARUB_v10021214mg, partial [Capsella rubella]
Length = 89
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVN+IKG++ISCD+PMAQFI +LN S PP+QKFIIQV
Sbjct: 17 MVNSIKGVFISCDVPMAQFIAHLNNSLPPSQKFIIQV 53
>ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group]
gi|34393555|dbj|BAC83153.1| unknown protein [Oryza
sativa Japonica Group] gi|113611604|dbj|BAF21982.1|
Os07g0573600 [Oryza sativa Japonica Group]
gi|215707252|dbj|BAG93712.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218199880|gb|EEC82307.1| hypothetical protein
OsI_26568 [Oryza sativa Indica Group]
gi|222637319|gb|EEE67451.1| hypothetical protein
OsJ_24828 [Oryza sativa Japonica Group]
Length = 131
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKGL+ISCD+PMAQFI+NLNAS P + KFI+ +
Sbjct: 62 MVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHM 98
>ref|NP_001054876.2| Os05g0198700 [Oryza sativa Japonica Group]
gi|255676118|dbj|BAF16790.2| Os05g0198700 [Oryza sativa
Japonica Group]
Length = 121
Score = 62.4 bits (150), Expect = 6e-08
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +2
Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
MVNAIKGL+ISCD+PMAQFI+NLNAS P + KFI+ +
Sbjct: 57 MVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHM 93