BLASTX nr result

ID: Mentha25_contig00009139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00009139
         (431 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004960540.1| PREDICTED: uncharacterized protein LOC101780...    66   4e-09
gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]               66   4e-09
ref|XP_006477302.1| PREDICTED: general transcription factor IIH ...    66   6e-09
ref|XP_002439126.1| hypothetical protein SORBIDRAFT_09g000940 [S...    66   6e-09
gb|AFW75001.1| REX1 DNA Repair family protein [Zea mays]               65   7e-09
gb|AFW74999.1| REX1 DNA Repair family protein, partial [Zea mays]      65   7e-09
ref|NP_001148022.1| REX1 DNA Repair family protein [Zea mays] gi...    65   7e-09
ref|XP_007040007.1| Nucleotide excision repair, TFIIH, subunit T...    65   1e-08
ref|XP_006363721.1| PREDICTED: general transcription factor IIH ...    64   2e-08
ref|XP_002266482.1| PREDICTED: general transcription factor IIH ...    64   2e-08
gb|EMT14713.1| General transcription factor IIH subunit 5 [Aegil...    64   2e-08
ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arab...    64   2e-08
ref|XP_006368720.1| hypothetical protein POPTR_0001s08090g [Popu...    64   2e-08
ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutr...    64   3e-08
ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like ...    64   3e-08
ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA...    64   3e-08
dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare]     63   4e-08
ref|XP_006303055.1| hypothetical protein CARUB_v10021214mg, part...    62   6e-08
ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group] g...    62   6e-08
ref|NP_001054876.2| Os05g0198700 [Oryza sativa Japonica Group] g...    62   6e-08

>ref|XP_004960540.1| PREDICTED: uncharacterized protein LOC101780092 [Setaria italica]
          Length = 70

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 29/37 (78%), Positives = 35/37 (94%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKGL+ISCDIPMAQFIINLNAS PP+++FI+ +
Sbjct: 1   MVNAIKGLFISCDIPMAQFIINLNASMPPSERFIVHM 37


>gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]
          Length = 113

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 39/88 (44%), Positives = 51/88 (57%)
 Frame = +2

Query: 167 CWSFQGRSSLALLPSVATAQPRIRYQALLPSLALTQPPRVTRPARSRTLVIMVNAIKGLY 346
           C+SF  R S    PS+       RYQ    S  + Q            +++MVNAIKG++
Sbjct: 6   CFSFVIRLSYKANPSLLYCDNNRRYQDY--SCFVLQ------------VLLMVNAIKGVF 51

Query: 347 ISCDIPMAQFIINLNASQPPAQKFIIQV 430
           +SCDIPM QFI+N+N S PP+QKFII V
Sbjct: 52  VSCDIPMTQFIVNMNNSMPPSQKFIIHV 79


>ref|XP_006477302.1| PREDICTED: general transcription factor IIH subunit 5-like isoform
           X1 [Citrus sinensis] gi|568846947|ref|XP_006477303.1|
           PREDICTED: general transcription factor IIH subunit
           5-like isoform X2 [Citrus sinensis]
           gi|568846949|ref|XP_006477304.1| PREDICTED: general
           transcription factor IIH subunit 5-like isoform X3
           [Citrus sinensis]
          Length = 70

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKGL+ISCDIPMAQFIIN+NAS P +QKFII +
Sbjct: 1   MVNAIKGLFISCDIPMAQFIINMNASMPQSQKFIIHI 37


>ref|XP_002439126.1| hypothetical protein SORBIDRAFT_09g000940 [Sorghum bicolor]
           gi|241944411|gb|EES17556.1| hypothetical protein
           SORBIDRAFT_09g000940 [Sorghum bicolor]
          Length = 70

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 28/37 (75%), Positives = 35/37 (94%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKGL+ISCDIPMAQFI+NLNAS PP+++FI+ +
Sbjct: 1   MVNAIKGLFISCDIPMAQFIVNLNASMPPSERFIVHM 37


>gb|AFW75001.1| REX1 DNA Repair family protein [Zea mays]
          Length = 154

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 27/37 (72%), Positives = 35/37 (94%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKGL+ISCD+PMAQFI+NLNAS PP+++FI+ +
Sbjct: 85  MVNAIKGLFISCDVPMAQFIVNLNASMPPSERFIVHM 121


>gb|AFW74999.1| REX1 DNA Repair family protein, partial [Zea mays]
          Length = 132

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 27/37 (72%), Positives = 35/37 (94%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKGL+ISCD+PMAQFI+NLNAS PP+++FI+ +
Sbjct: 63  MVNAIKGLFISCDVPMAQFIVNLNASMPPSERFIVHM 99


>ref|NP_001148022.1| REX1 DNA Repair family protein [Zea mays]
           gi|195615234|gb|ACG29447.1| REX1 DNA Repair family
           protein [Zea mays] gi|195628074|gb|ACG35867.1| REX1 DNA
           Repair family protein [Zea mays]
           gi|195639980|gb|ACG39458.1| REX1 DNA Repair family
           protein [Zea mays] gi|413942353|gb|AFW75002.1| REX1 DNA
           Repair family protein [Zea mays]
          Length = 70

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 27/37 (72%), Positives = 35/37 (94%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKGL+ISCD+PMAQFI+NLNAS PP+++FI+ +
Sbjct: 1   MVNAIKGLFISCDVPMAQFIVNLNASMPPSERFIVHM 37


>ref|XP_007040007.1| Nucleotide excision repair, TFIIH, subunit TTDA isoform 1
           [Theobroma cacao] gi|590677408|ref|XP_007040008.1|
           Nucleotide excision repair, TFIIH, subunit TTDA isoform
           1 [Theobroma cacao] gi|508777252|gb|EOY24508.1|
           Nucleotide excision repair, TFIIH, subunit TTDA isoform
           1 [Theobroma cacao] gi|508777253|gb|EOY24509.1|
           Nucleotide excision repair, TFIIH, subunit TTDA isoform
           1 [Theobroma cacao]
          Length = 70

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNA KGL+ISCDIPMAQFI+NLNAS P +QKFII V
Sbjct: 1   MVNATKGLFISCDIPMAQFIVNLNASMPASQKFIIHV 37


>ref|XP_006363721.1| PREDICTED: general transcription factor IIH subunit 5-like [Solanum
           tuberosum]
          Length = 70

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNA+KGLY+SCDIPM QFIIN+NAS P +QKFII V
Sbjct: 1   MVNAVKGLYLSCDIPMTQFIINMNASLPQSQKFIIHV 37


>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
           vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
           product [Vitis vinifera]
          Length = 70

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNA KGL+ISCDIPMAQFIIN+NAS P +QKFII V
Sbjct: 1   MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHV 37


>gb|EMT14713.1| General transcription factor IIH subunit 5 [Aegilops tauschii]
          Length = 70

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKGL+ISCDIPMAQFI+N+NAS P ++KFI+ +
Sbjct: 1   MVNAIKGLFISCDIPMAQFIVNMNASMPASEKFIVHI 37


>ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arabidopsis lyrata subsp.
           lyrata] gi|297335775|gb|EFH66192.1| hypothetical protein
           ARALYDRAFT_471390 [Arabidopsis lyrata subsp. lyrata]
          Length = 71

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKG++ISCDIPM QFI+N+N S PP+QKFII V
Sbjct: 1   MVNAIKGVFISCDIPMTQFIVNMNNSMPPSQKFIIHV 37


>ref|XP_006368720.1| hypothetical protein POPTR_0001s08090g [Populus trichocarpa]
           gi|566147875|ref|XP_006368721.1| hypothetical protein
           POPTR_0001s08090g [Populus trichocarpa]
           gi|566147877|ref|XP_006368722.1| hypothetical protein
           POPTR_0001s08090g [Populus trichocarpa]
           gi|550346807|gb|ERP65289.1| hypothetical protein
           POPTR_0001s08090g [Populus trichocarpa]
           gi|550346808|gb|ERP65290.1| hypothetical protein
           POPTR_0001s08090g [Populus trichocarpa]
           gi|550346809|gb|ERP65291.1| hypothetical protein
           POPTR_0001s08090g [Populus trichocarpa]
          Length = 70

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNA KGL+ISCDIPMAQFIINLNAS P +QKFII +
Sbjct: 1   MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHI 37


>ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutrema salsugineum]
           gi|557095010|gb|ESQ35592.1| hypothetical protein
           EUTSA_v10009271mg [Eutrema salsugineum]
          Length = 70

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKG++ISCDIPMAQFI+N+N+S P +QKFII V
Sbjct: 1   MVNAIKGVFISCDIPMAQFIVNMNSSMPSSQKFIIHV 37


>ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
           distachyon]
          Length = 457

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKGL+ISCD+PMAQFI+NLNAS P ++KFI+ +
Sbjct: 1   MVNAIKGLFISCDVPMAQFIVNLNASMPASEKFIVHM 37


>ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA [Arabidopsis
           thaliana] gi|38566546|gb|AAR24163.1| At1g12400
           [Arabidopsis thaliana] gi|40823747|gb|AAR92302.1|
           At1g12400 [Arabidopsis thaliana]
           gi|332190754|gb|AEE28875.1| nucleotide excision repair,
           TFIIH, subunit TTDA [Arabidopsis thaliana]
          Length = 71

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKG+++SCDIPM QFI+N+N S PP+QKFII V
Sbjct: 1   MVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHV 37


>dbj|BAK07005.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 71

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKGL+ISCDIPMAQFI+N+NAS P + KFI+ +
Sbjct: 2   MVNAIKGLFISCDIPMAQFIVNMNASMPASDKFIVHI 38


>ref|XP_006303055.1| hypothetical protein CARUB_v10021214mg, partial [Capsella rubella]
           gi|482571765|gb|EOA35953.1| hypothetical protein
           CARUB_v10021214mg, partial [Capsella rubella]
          Length = 89

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/37 (75%), Positives = 34/37 (91%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVN+IKG++ISCD+PMAQFI +LN S PP+QKFIIQV
Sbjct: 17  MVNSIKGVFISCDVPMAQFIAHLNNSLPPSQKFIIQV 53


>ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group]
           gi|34393555|dbj|BAC83153.1| unknown protein [Oryza
           sativa Japonica Group] gi|113611604|dbj|BAF21982.1|
           Os07g0573600 [Oryza sativa Japonica Group]
           gi|215707252|dbj|BAG93712.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218199880|gb|EEC82307.1| hypothetical protein
           OsI_26568 [Oryza sativa Indica Group]
           gi|222637319|gb|EEE67451.1| hypothetical protein
           OsJ_24828 [Oryza sativa Japonica Group]
          Length = 131

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKGL+ISCD+PMAQFI+NLNAS P + KFI+ +
Sbjct: 62  MVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHM 98


>ref|NP_001054876.2| Os05g0198700 [Oryza sativa Japonica Group]
           gi|255676118|dbj|BAF16790.2| Os05g0198700 [Oryza sativa
           Japonica Group]
          Length = 121

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/37 (72%), Positives = 33/37 (89%)
 Frame = +2

Query: 320 MVNAIKGLYISCDIPMAQFIINLNASQPPAQKFIIQV 430
           MVNAIKGL+ISCD+PMAQFI+NLNAS P + KFI+ +
Sbjct: 57  MVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHM 93


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