BLASTX nr result

ID: Mentha25_contig00005856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00005856
         (399 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding pro...    60   3e-07
gb|ACU24035.1| unknown [Glycine max]                                   60   3e-07
ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula] g...    60   4e-07
ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] g...    60   4e-07
ref|XP_004495202.1| PREDICTED: chloroplast stem-loop binding pro...    59   5e-07
ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding pro...    59   7e-07
ref|NP_001234656.1| mRNA binding protein precursor [Solanum lyco...    59   7e-07
ref|XP_007144635.1| hypothetical protein PHAVU_007G172100g [Phas...    59   9e-07
ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding pro...    59   9e-07
ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citr...    57   2e-06
gb|ABK42080.1| mRNA-binding protein [Capsicum annuum]                  57   2e-06
gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotian...    57   2e-06
gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis]      56   4e-06

>ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Glycine max]
          Length = 403

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/48 (62%), Positives = 33/48 (68%)
 Frame = -1

Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
           LGW ST+NLPEDLKER+EEYVKIGR             + ALKVPVTV
Sbjct: 356 LGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVTV 403


>gb|ACU24035.1| unknown [Glycine max]
          Length = 403

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/48 (62%), Positives = 33/48 (68%)
 Frame = -1

Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
           LGW ST+NLPEDLKER+EEYVKIGR             + ALKVPVTV
Sbjct: 356 LGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVTV 403


>ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula]
           gi|355479698|gb|AES60901.1| MRNA-binding protein
           [Medicago truncatula]
          Length = 419

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/48 (60%), Positives = 34/48 (70%)
 Frame = -1

Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
           LGWSST+NLPEDLKER+EEY+KIGR             + ALKVPV+V
Sbjct: 372 LGWSSTTNLPEDLKERFEEYIKIGRDKKPIKFELDDKILEALKVPVSV 419


>ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
           gi|355479697|gb|AES60900.1| MRNA-binding protein
           [Medicago truncatula]
          Length = 401

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/48 (60%), Positives = 34/48 (70%)
 Frame = -1

Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
           LGWSST+NLPEDLKER+EEY+KIGR             + ALKVPV+V
Sbjct: 354 LGWSSTTNLPEDLKERFEEYIKIGRDKKPIKFELDDKILEALKVPVSV 401


>ref|XP_004495202.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Cicer arietinum]
          Length = 403

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/48 (60%), Positives = 33/48 (68%)
 Frame = -1

Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
           LGWSST+NLPEDLKER+EEY+KIGR             + ALKVPV V
Sbjct: 356 LGWSSTTNLPEDLKERFEEYIKIGRDKKPIKFEVDDKILEALKVPVAV 403


>ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Solanum tuberosum]
          Length = 401

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/47 (61%), Positives = 33/47 (70%)
 Frame = -1

Query: 399 ILGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPV 259
           ILGWS+T+NLPEDLKERYEEYVKIGR             + +LKVPV
Sbjct: 353 ILGWSATTNLPEDLKERYEEYVKIGRDKKEMKFELDDKILESLKVPV 399


>ref|NP_001234656.1| mRNA binding protein precursor [Solanum lycopersicum]
           gi|26453355|gb|AAD21574.3| mRNA binding protein
           precursor [Solanum lycopersicum]
          Length = 407

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/47 (61%), Positives = 33/47 (70%)
 Frame = -1

Query: 399 ILGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPV 259
           ILGWS+T+NLPEDLKERYEEYVKIGR             + +LKVPV
Sbjct: 359 ILGWSATTNLPEDLKERYEEYVKIGRDKKEMKFELDDKILESLKVPV 405


>ref|XP_007144635.1| hypothetical protein PHAVU_007G172100g [Phaseolus vulgaris]
           gi|561017825|gb|ESW16629.1| hypothetical protein
           PHAVU_007G172100g [Phaseolus vulgaris]
          Length = 402

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/48 (60%), Positives = 33/48 (68%)
 Frame = -1

Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
           LGW ST+NLPEDLKER+EEYVKIGR             + ALKVPV+V
Sbjct: 355 LGWESTTNLPEDLKERFEEYVKIGRDKKSIKFEVDDKILEALKVPVSV 402


>ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Glycine max]
          Length = 404

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/48 (60%), Positives = 33/48 (68%)
 Frame = -1

Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
           LGW ST+NLPEDLKER+EEYVKIGR             + ALKVPV+V
Sbjct: 357 LGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVSV 404


>ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citrus clementina]
           gi|568852108|ref|XP_006479722.1| PREDICTED: chloroplast
           stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Citrus sinensis]
           gi|557546339|gb|ESR57317.1| hypothetical protein
           CICLE_v10020449mg [Citrus clementina]
          Length = 401

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = -1

Query: 399 ILGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
           ILGW ST+NLPEDLKER+EEYVKIGR             + +LKVP+ V
Sbjct: 353 ILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401


>gb|ABK42080.1| mRNA-binding protein [Capsicum annuum]
          Length = 169

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -1

Query: 399 ILGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPV 259
           ILGWS+T+NLPEDLKER+EEYVKIGR             + +LKVPV
Sbjct: 121 ILGWSATTNLPEDLKERFEEYVKIGRDKKEMKFELDDKILESLKVPV 167


>gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]
          Length = 405

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/47 (59%), Positives = 33/47 (70%)
 Frame = -1

Query: 399 ILGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPV 259
           ILGWS+T+NLPEDLKER++EYVKIGR             + ALKVPV
Sbjct: 357 ILGWSATTNLPEDLKERFDEYVKIGRDKKEMKFELDDKILEALKVPV 403


>gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis]
          Length = 408

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/47 (59%), Positives = 31/47 (65%)
 Frame = -1

Query: 399 ILGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPV 259
           ILGW  T+NLPEDLKER+EEYVKIGR             + ALKVPV
Sbjct: 360 ILGWQGTTNLPEDLKERFEEYVKIGRDKKDIKFELDDKILDALKVPV 406


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