BLASTX nr result
ID: Mentha25_contig00005856
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00005856
(399 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding pro... 60 3e-07
gb|ACU24035.1| unknown [Glycine max] 60 3e-07
ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula] g... 60 4e-07
ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] g... 60 4e-07
ref|XP_004495202.1| PREDICTED: chloroplast stem-loop binding pro... 59 5e-07
ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding pro... 59 7e-07
ref|NP_001234656.1| mRNA binding protein precursor [Solanum lyco... 59 7e-07
ref|XP_007144635.1| hypothetical protein PHAVU_007G172100g [Phas... 59 9e-07
ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding pro... 59 9e-07
ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citr... 57 2e-06
gb|ABK42080.1| mRNA-binding protein [Capsicum annuum] 57 2e-06
gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotian... 57 2e-06
gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis] 56 4e-06
>ref|XP_003518924.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Glycine max]
Length = 403
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/48 (62%), Positives = 33/48 (68%)
Frame = -1
Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
LGW ST+NLPEDLKER+EEYVKIGR + ALKVPVTV
Sbjct: 356 LGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVTV 403
>gb|ACU24035.1| unknown [Glycine max]
Length = 403
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/48 (62%), Positives = 33/48 (68%)
Frame = -1
Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
LGW ST+NLPEDLKER+EEYVKIGR + ALKVPVTV
Sbjct: 356 LGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVTV 403
>ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula]
gi|355479698|gb|AES60901.1| MRNA-binding protein
[Medicago truncatula]
Length = 419
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -1
Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
LGWSST+NLPEDLKER+EEY+KIGR + ALKVPV+V
Sbjct: 372 LGWSSTTNLPEDLKERFEEYIKIGRDKKPIKFELDDKILEALKVPVSV 419
>ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
gi|355479697|gb|AES60900.1| MRNA-binding protein
[Medicago truncatula]
Length = 401
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -1
Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
LGWSST+NLPEDLKER+EEY+KIGR + ALKVPV+V
Sbjct: 354 LGWSSTTNLPEDLKERFEEYIKIGRDKKPIKFELDDKILEALKVPVSV 401
>ref|XP_004495202.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Cicer arietinum]
Length = 403
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = -1
Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
LGWSST+NLPEDLKER+EEY+KIGR + ALKVPV V
Sbjct: 356 LGWSSTTNLPEDLKERFEEYIKIGRDKKPIKFEVDDKILEALKVPVAV 403
>ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Solanum tuberosum]
Length = 401
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = -1
Query: 399 ILGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPV 259
ILGWS+T+NLPEDLKERYEEYVKIGR + +LKVPV
Sbjct: 353 ILGWSATTNLPEDLKERYEEYVKIGRDKKEMKFELDDKILESLKVPV 399
>ref|NP_001234656.1| mRNA binding protein precursor [Solanum lycopersicum]
gi|26453355|gb|AAD21574.3| mRNA binding protein
precursor [Solanum lycopersicum]
Length = 407
Score = 58.9 bits (141), Expect = 7e-07
Identities = 29/47 (61%), Positives = 33/47 (70%)
Frame = -1
Query: 399 ILGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPV 259
ILGWS+T+NLPEDLKERYEEYVKIGR + +LKVPV
Sbjct: 359 ILGWSATTNLPEDLKERYEEYVKIGRDKKEMKFELDDKILESLKVPV 405
>ref|XP_007144635.1| hypothetical protein PHAVU_007G172100g [Phaseolus vulgaris]
gi|561017825|gb|ESW16629.1| hypothetical protein
PHAVU_007G172100g [Phaseolus vulgaris]
Length = 402
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = -1
Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
LGW ST+NLPEDLKER+EEYVKIGR + ALKVPV+V
Sbjct: 355 LGWESTTNLPEDLKERFEEYVKIGRDKKSIKFEVDDKILEALKVPVSV 402
>ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
chloroplastic-like [Glycine max]
Length = 404
Score = 58.5 bits (140), Expect = 9e-07
Identities = 29/48 (60%), Positives = 33/48 (68%)
Frame = -1
Query: 396 LGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
LGW ST+NLPEDLKER+EEYVKIGR + ALKVPV+V
Sbjct: 357 LGWQSTTNLPEDLKERFEEYVKIGRDKKSIQFELDDKILEALKVPVSV 404
>ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citrus clementina]
gi|568852108|ref|XP_006479722.1| PREDICTED: chloroplast
stem-loop binding protein of 41 kDa a,
chloroplastic-like [Citrus sinensis]
gi|557546339|gb|ESR57317.1| hypothetical protein
CICLE_v10020449mg [Citrus clementina]
Length = 401
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = -1
Query: 399 ILGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPVTV 253
ILGW ST+NLPEDLKER+EEYVKIGR + +LKVP+ V
Sbjct: 353 ILGWRSTTNLPEDLKERFEEYVKIGRDKKAMQFEIDDKILESLKVPIPV 401
>gb|ABK42080.1| mRNA-binding protein [Capsicum annuum]
Length = 169
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1
Query: 399 ILGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPV 259
ILGWS+T+NLPEDLKER+EEYVKIGR + +LKVPV
Sbjct: 121 ILGWSATTNLPEDLKERFEEYVKIGRDKKEMKFELDDKILESLKVPV 167
>gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]
Length = 405
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = -1
Query: 399 ILGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPV 259
ILGWS+T+NLPEDLKER++EYVKIGR + ALKVPV
Sbjct: 357 ILGWSATTNLPEDLKERFDEYVKIGRDKKEMKFELDDKILEALKVPV 403
>gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis]
Length = 408
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/47 (59%), Positives = 31/47 (65%)
Frame = -1
Query: 399 ILGWSSTSNLPEDLKERYEEYVKIGRXXXXXXXXXXXXXIAALKVPV 259
ILGW T+NLPEDLKER+EEYVKIGR + ALKVPV
Sbjct: 360 ILGWQGTTNLPEDLKERFEEYVKIGRDKKDIKFELDDKILDALKVPV 406