BLASTX nr result

ID: Mentha25_contig00004424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00004424
         (472 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU33717.1| hypothetical protein MIMGU_mgv1a003044mg [Mimulus...    72   1e-10
ref|XP_006363757.1| PREDICTED: putative ribosomal RNA methyltran...    72   1e-10
ref|XP_004243478.1| PREDICTED: putative ribosomal RNA methyltran...    65   1e-08
ref|XP_006347163.1| PREDICTED: putative ribosomal RNA methyltran...    65   1e-08
ref|XP_004232776.1| PREDICTED: putative ribosomal RNA methyltran...    64   2e-08

>gb|EYU33717.1| hypothetical protein MIMGU_mgv1a003044mg [Mimulus guttatus]
          Length = 612

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 42/80 (52%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
 Frame = -1

Query: 385 MAGPNLNKKKGGRAVNPPPKKKQKALPIIEKEALKEDVVSDSDGSEGPEMLENSGGEDQ- 209
           MAGP   KKK  R  N PP KKQK +  ++KEA KE+++SD D S+ PE LE S  E+Q 
Sbjct: 1   MAGPK-GKKKNARTSNAPPMKKQKRVFTVQKEAEKEELLSDLDVSDEPENLEESDLEEQE 59

Query: 208 --AQSDMSSDGDDVFAGDIL 155
             + SDMSS GDD  + DIL
Sbjct: 60  MDSDSDMSSGGDDPLSKDIL 79


>ref|XP_006363757.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Solanum tuberosum]
          Length = 647

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 39/82 (47%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
 Frame = -1

Query: 385 MAGPNLNKKKGGRAVNPPPKKKQKALPIIEKEALKEDVVSDSDGSEGPEMLENSGGEDQA 206
           MAGP L KK G +   PP KKKQK  P+  K   KED+ SD +G++G    +   G+++ 
Sbjct: 1   MAGPKLGKKVGSKLGKPPTKKKQKKEPLPPKPLEKEDLFSDDEGTDGDFEEDGGSGDEEQ 60

Query: 205 Q-----SDMSSDGDDVFAGDIL 155
           Q     SDMSSD DD FA DIL
Sbjct: 61  QEMNSDSDMSSDLDDTFAADIL 82


>ref|XP_004243478.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Solanum lycopersicum]
          Length = 646

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 39/82 (47%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
 Frame = -1

Query: 385 MAGPNLNKKKGGRAVNPPPKKKQKALPIIEKEALKEDVVSDSDGSEGPEMLENSGGEDQA 206
           MAG  L KK G +   PP KKKQK  P+  K   KED+ SDS+G++G    +   G+++ 
Sbjct: 1   MAG-KLGKKVGSKLGKPPTKKKQKKEPLPPKPLEKEDLFSDSEGTDGDFEEDGGSGDEEQ 59

Query: 205 Q-----SDMSSDGDDVFAGDIL 155
           Q     SDMSSD DD FA DIL
Sbjct: 60  QEMNSDSDMSSDLDDPFAADIL 81


>ref|XP_006347163.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Solanum tuberosum]
          Length = 637

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 36/77 (46%), Positives = 48/77 (62%)
 Frame = -1

Query: 385 MAGPNLNKKKGGRAVNPPPKKKQKALPIIEKEALKEDVVSDSDGSEGPEMLENSGGEDQA 206
           MAGP L KK G +    P KKKQK  P+  K   KE++ SDS+G++G +  E+   +  +
Sbjct: 1   MAGPKLGKKSGSKLGKLPAKKKQKKEPLPAKPLEKEELFSDSEGTDG-DFQEDDEQKINS 59

Query: 205 QSDMSSDGDDVFAGDIL 155
            S+MSSD DD FA DIL
Sbjct: 60  DSEMSSDIDDPFAADIL 76


>ref|XP_004232776.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Solanum lycopersicum]
          Length = 637

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 36/77 (46%), Positives = 47/77 (61%)
 Frame = -1

Query: 385 MAGPNLNKKKGGRAVNPPPKKKQKALPIIEKEALKEDVVSDSDGSEGPEMLENSGGEDQA 206
           MAGP L KK   +    P KKKQK  P+  K   KE++ SDS+G++G +  E+   E  +
Sbjct: 1   MAGPKLGKKSSSKLGKLPAKKKQKKEPLPAKPLEKEELFSDSEGTDG-DFQEDDEQEINS 59

Query: 205 QSDMSSDGDDVFAGDIL 155
            S+MSSD DD FA DIL
Sbjct: 60  DSEMSSDIDDPFAADIL 76


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