BLASTX nr result
ID: Mentha25_contig00003150
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha25_contig00003150
(315 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides] 124 1e-26
gb|EYU38405.1| hypothetical protein MIMGU_mgv1a008259mg [Mimulus... 124 2e-26
ref|XP_002319474.2| hypothetical protein POPTR_0013s00760g [Popu... 122 4e-26
gb|EPS69756.1| hypothetical protein M569_05003 [Genlisea aurea] 120 1e-25
ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putativ... 120 3e-25
ref|XP_006382356.1| hypothetical protein POPTR_0005s01370g [Popu... 119 3e-25
ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutr... 118 1e-24
gb|AFK36692.1| unknown [Medicago truncatula] 118 1e-24
dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila] 118 1e-24
gb|AFK44229.1| unknown [Medicago truncatula] 116 3e-24
ref|XP_006347295.1| PREDICTED: chloroplast stem-loop binding pro... 116 4e-24
ref|XP_004241412.1| PREDICTED: chloroplast stem-loop binding pro... 116 4e-24
ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Caps... 115 5e-24
ref|XP_007163307.1| hypothetical protein PHAVU_001G223800g [Phas... 115 6e-24
ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340... 115 6e-24
ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidop... 115 8e-24
emb|CAA71589.1| g5bf [Arabidopsis thaliana] 115 8e-24
emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana] 115 8e-24
gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana] 115 8e-24
gb|AAL32648.1| g5bf protein [Arabidopsis thaliana] 115 8e-24
>gb|ABK96584.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 380
Score = 124 bits (311), Expect = 1e-26
Identities = 62/85 (72%), Positives = 67/85 (78%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q QP DFNG RL S +QCKR+VWQ KGAL+VSASS+K ILIMGGTRFIG+
Sbjct: 9 QQTQPSFSLLPSSLSDFNGTRLHSQVQCKRRVWQTKGALQVSASSSKNILIMGGTRFIGV 68
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSRLLVKEGHQVTLFTRGKAPI Q
Sbjct: 69 FLSRLLVKEGHQVTLFTRGKAPITQ 93
>gb|EYU38405.1| hypothetical protein MIMGU_mgv1a008259mg [Mimulus guttatus]
Length = 379
Score = 124 bits (310), Expect = 2e-26
Identities = 63/84 (75%), Positives = 69/84 (82%)
Frame = +3
Query: 63 HKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGIF 242
HKQP DF+GARLT+S+Q KRKVWQ K AL V+ASS KKILIMGGTRFIG+F
Sbjct: 9 HKQPSSAILSSSLSDFSGARLTASVQYKRKVWQSKSALSVTASSEKKILIMGGTRFIGLF 68
Query: 243 LSRLLVKEGHQVTLFTRGKAPIAQ 314
LSRLLVKEGH+VTLFTRGKAPIAQ
Sbjct: 69 LSRLLVKEGHKVTLFTRGKAPIAQ 92
>ref|XP_002319474.2| hypothetical protein POPTR_0013s00760g [Populus trichocarpa]
gi|118487652|gb|ABK95651.1| unknown [Populus
trichocarpa] gi|550324645|gb|EEE95397.2| hypothetical
protein POPTR_0013s00760g [Populus trichocarpa]
Length = 380
Score = 122 bits (307), Expect = 4e-26
Identities = 61/85 (71%), Positives = 67/85 (78%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q QP DFNG RL S ++CKR+VWQ KGAL+VSASS+K ILIMGGTRFIG+
Sbjct: 9 QQTQPSFSLLPSSLSDFNGTRLHSQVRCKRRVWQTKGALQVSASSSKNILIMGGTRFIGV 68
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSRLLVKEGHQVTLFTRGKAPI Q
Sbjct: 69 FLSRLLVKEGHQVTLFTRGKAPITQ 93
>gb|EPS69756.1| hypothetical protein M569_05003 [Genlisea aurea]
Length = 379
Score = 120 bits (302), Expect = 1e-25
Identities = 63/86 (73%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSA-KKILIMGGTRFIG 236
QHKQP DFNG+RLT+S+Q KR + QPKGA+RV+ASS+ KKILIMGGTRFIG
Sbjct: 8 QHKQPSSIVLSSSLSDFNGSRLTASIQYKRAMKQPKGAMRVTASSSSKKILIMGGTRFIG 67
Query: 237 IFLSRLLVKEGHQVTLFTRGKAPIAQ 314
IFLSRLLVKEGHQVTLFTRGKAPI++
Sbjct: 68 IFLSRLLVKEGHQVTLFTRGKAPISK 93
>ref|XP_002512541.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
gi|223548502|gb|EEF49993.1| NAD dependent
epimerase/dehydratase, putative [Ricinus communis]
Length = 381
Score = 120 bits (300), Expect = 3e-25
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +3
Query: 105 DFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 284
DFNG RL + +QCKR+VWQ KGAL+V+ASS+K ILIMGGTRFIG+FLSRLLVKEGHQVTL
Sbjct: 25 DFNGTRLHTQIQCKRRVWQAKGALQVTASSSKNILIMGGTRFIGVFLSRLLVKEGHQVTL 84
Query: 285 FTRGKAPIAQ 314
FTRGKAPI Q
Sbjct: 85 FTRGKAPITQ 94
>ref|XP_006382356.1| hypothetical protein POPTR_0005s01370g [Populus trichocarpa]
gi|550337715|gb|ERP60153.1| hypothetical protein
POPTR_0005s01370g [Populus trichocarpa]
Length = 380
Score = 119 bits (299), Expect = 3e-25
Identities = 60/85 (70%), Positives = 65/85 (76%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q QP DFNG RL S +QCKR+ WQ K AL+VSASS+K ILIMGGTRFIG+
Sbjct: 9 QQTQPSLSLLLSSLSDFNGTRLHSQVQCKRRAWQTKRALQVSASSSKNILIMGGTRFIGV 68
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSRLLVKEGHQVTLFTRGKAPI Q
Sbjct: 69 FLSRLLVKEGHQVTLFTRGKAPITQ 93
>ref|XP_006417582.1| hypothetical protein EUTSA_v10007937mg [Eutrema salsugineum]
gi|557095353|gb|ESQ35935.1| hypothetical protein
EUTSA_v10007937mg [Eutrema salsugineum]
Length = 379
Score = 118 bits (295), Expect = 1e-24
Identities = 61/85 (71%), Positives = 67/85 (78%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q QP DFNGA+L +Q KRKV+QPKGAL VSASS KKILIMGGTRFIG+
Sbjct: 8 QQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMGGTRFIGV 67
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSRLLVKEGHQVTLFTRGK+PIA+
Sbjct: 68 FLSRLLVKEGHQVTLFTRGKSPIAK 92
>gb|AFK36692.1| unknown [Medicago truncatula]
Length = 378
Score = 118 bits (295), Expect = 1e-24
Identities = 58/70 (82%), Positives = 62/70 (88%)
Frame = +3
Query: 105 DFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 284
DFNGARL + +Q KRK WQPKG+L VSASS KKILIMGGTRFIG+FLSR LVKEGHQVTL
Sbjct: 23 DFNGARLQTHIQLKRKTWQPKGSLIVSASSTKKILIMGGTRFIGVFLSRQLVKEGHQVTL 82
Query: 285 FTRGKAPIAQ 314
FTRGKAPI Q
Sbjct: 83 FTRGKAPITQ 92
>dbj|BAJ33886.1| unnamed protein product [Thellungiella halophila]
Length = 379
Score = 118 bits (295), Expect = 1e-24
Identities = 61/85 (71%), Positives = 67/85 (78%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q QP DFNGA+L +Q KRKV+QPKGAL VSASS KKILIMGGTRFIG+
Sbjct: 8 QQSQPSFSLLTSSLSDFNGAKLHLQVQYKRKVYQPKGALYVSASSEKKILIMGGTRFIGV 67
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSRLLVKEGHQVTLFTRGK+PIA+
Sbjct: 68 FLSRLLVKEGHQVTLFTRGKSPIAK 92
>gb|AFK44229.1| unknown [Medicago truncatula]
Length = 378
Score = 116 bits (291), Expect = 3e-24
Identities = 57/70 (81%), Positives = 61/70 (87%)
Frame = +3
Query: 105 DFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 284
DFNG RL + +Q KRK WQPKG+L VSASS KKILIMGGTRFIG+FLSR LVKEGHQVTL
Sbjct: 23 DFNGTRLQTHIQLKRKTWQPKGSLIVSASSTKKILIMGGTRFIGVFLSRQLVKEGHQVTL 82
Query: 285 FTRGKAPIAQ 314
FTRGKAPI Q
Sbjct: 83 FTRGKAPITQ 92
>ref|XP_006347295.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Solanum tuberosum]
Length = 379
Score = 116 bits (290), Expect = 4e-24
Identities = 62/85 (72%), Positives = 66/85 (77%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q KQP DFNGARL SS Q KRK KGAL+V+ASS KKILIMGGTRFIG+
Sbjct: 8 QPKQPSFSVLPSSHSDFNGARLISSFQYKRKPCLSKGALQVTASSEKKILIMGGTRFIGV 67
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSRLLVKEGHQVTLFTRGKAPI+Q
Sbjct: 68 FLSRLLVKEGHQVTLFTRGKAPISQ 92
>ref|XP_004241412.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic-like [Solanum lycopersicum]
Length = 379
Score = 116 bits (290), Expect = 4e-24
Identities = 62/85 (72%), Positives = 66/85 (77%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q KQP DFNGARL SS Q KRK KGAL+V+ASS KKILIMGGTRFIG+
Sbjct: 8 QPKQPSFSLLPSSNSDFNGARLISSFQYKRKPCLSKGALQVTASSEKKILIMGGTRFIGV 67
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSRLLVKEGHQVTLFTRGKAPI+Q
Sbjct: 68 FLSRLLVKEGHQVTLFTRGKAPISQ 92
>ref|XP_006305088.1| hypothetical protein CARUB_v10009455mg [Capsella rubella]
gi|482573799|gb|EOA37986.1| hypothetical protein
CARUB_v10009455mg [Capsella rubella]
Length = 379
Score = 115 bits (289), Expect = 5e-24
Identities = 61/85 (71%), Positives = 65/85 (76%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q QP DFNGA+L +Q KRKV QPKGAL VSASS KKILIMGGTRFIG+
Sbjct: 8 QQHQPSFSLLNSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGV 67
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSRLLVKEGHQVTLFTRGK PIA+
Sbjct: 68 FLSRLLVKEGHQVTLFTRGKTPIAK 92
>ref|XP_007163307.1| hypothetical protein PHAVU_001G223800g [Phaseolus vulgaris]
gi|561036771|gb|ESW35301.1| hypothetical protein
PHAVU_001G223800g [Phaseolus vulgaris]
Length = 378
Score = 115 bits (288), Expect = 6e-24
Identities = 55/70 (78%), Positives = 61/70 (87%)
Frame = +3
Query: 105 DFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGIFLSRLLVKEGHQVTL 284
DF+G RL + LQ KRK+WQPKG+ VSASS KKILIMGGTRFIG+FLSRLLVKEGHQVTL
Sbjct: 23 DFSGTRLPTQLQLKRKLWQPKGSFYVSASSTKKILIMGGTRFIGVFLSRLLVKEGHQVTL 82
Query: 285 FTRGKAPIAQ 314
FTRGK P+ Q
Sbjct: 83 FTRGKTPVTQ 92
>ref|XP_002281395.1| PREDICTED: uncharacterized protein At1g09340, chloroplastic [Vitis
vinifera] gi|147773479|emb|CAN73432.1| hypothetical
protein VITISV_032681 [Vitis vinifera]
gi|296089806|emb|CBI39625.3| unnamed protein product
[Vitis vinifera]
Length = 378
Score = 115 bits (288), Expect = 6e-24
Identities = 59/86 (68%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Frame = +3
Query: 60 QHK-QPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIG 236
QH+ QP DFNG RLT+ +QC+RKV QPKGAL V+AS KKIL+MGGTRFIG
Sbjct: 7 QHQNQPSFSLLPSSLSDFNGIRLTNHIQCRRKVCQPKGALHVTASGEKKILMMGGTRFIG 66
Query: 237 IFLSRLLVKEGHQVTLFTRGKAPIAQ 314
+FL+RLLVKEGHQVTLFTRGKA I Q
Sbjct: 67 VFLARLLVKEGHQVTLFTRGKAAITQ 92
>ref|NP_172405.1| chloroplast stem-loop binding protein [Arabidopsis thaliana]
gi|75313128|sp|Q9SA52.1|CP41B_ARATH RecName:
Full=Chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic; Short=CSP41-b; AltName:
Full=Heteroglycan-interacting protein 1.3; AltName:
Full=Protein CHLOROPLAST RNA BINDING; AltName:
Full=Protein Gb5f; Flags: Precursor
gi|11762234|gb|AAG40395.1|AF325043_1 At1g09340
[Arabidopsis thaliana]
gi|16226247|gb|AAL16114.1|AF428282_1 At1g09340/T31J12_6
[Arabidopsis thaliana] gi|4337177|gb|AAD18098.1|
Identical to gb|Y10557 g5bf gene from Arabidopsis
thaliana. ESTs gb|R30578, gb|R90475, gb|T22384,
gb|T22425, gb|N64934 and gb|T46767 come from this gene
[Arabidopsis thaliana] gi|14334754|gb|AAK59555.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|17979099|gb|AAL47493.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|332190310|gb|AEE28431.1|
chloroplast stem-loop binding protein [Arabidopsis
thaliana]
Length = 378
Score = 115 bits (287), Expect = 8e-24
Identities = 60/85 (70%), Positives = 66/85 (77%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q QP DFNGA+L +Q KRKV QPKGAL VSASS KKILIMGGTRFIG+
Sbjct: 8 QQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGL 67
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSR+LVKEGHQVTLFTRGK+PIA+
Sbjct: 68 FLSRILVKEGHQVTLFTRGKSPIAK 92
>emb|CAA71589.1| g5bf [Arabidopsis thaliana]
Length = 378
Score = 115 bits (287), Expect = 8e-24
Identities = 60/85 (70%), Positives = 66/85 (77%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q QP DFNGA+L +Q KRKV QPKGAL VSASS KKILIMGGTRFIG+
Sbjct: 8 QQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGL 67
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSR+LVKEGHQVTLFTRGK+PIA+
Sbjct: 68 FLSRILVKEGHQVTLFTRGKSPIAK 92
>emb|CAA75602.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 374
Score = 115 bits (287), Expect = 8e-24
Identities = 60/85 (70%), Positives = 66/85 (77%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q QP DFNGA+L +Q KRKV QPKGAL VSASS KKILIMGGTRFIG+
Sbjct: 4 QQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGL 63
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSR+LVKEGHQVTLFTRGK+PIA+
Sbjct: 64 FLSRILVKEGHQVTLFTRGKSPIAK 88
>gb|AAM65150.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 378
Score = 115 bits (287), Expect = 8e-24
Identities = 60/85 (70%), Positives = 66/85 (77%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q QP DFNGA+L +Q KRKV QPKGAL VSASS KKILIMGGTRFIG+
Sbjct: 8 QQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGL 67
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSR+LVKEGHQVTLFTRGK+PIA+
Sbjct: 68 FLSRILVKEGHQVTLFTRGKSPIAK 92
>gb|AAL32648.1| g5bf protein [Arabidopsis thaliana]
Length = 378
Score = 115 bits (287), Expect = 8e-24
Identities = 60/85 (70%), Positives = 66/85 (77%)
Frame = +3
Query: 60 QHKQPXXXXXXXXXXDFNGARLTSSLQCKRKVWQPKGALRVSASSAKKILIMGGTRFIGI 239
Q QP DFNGA+L +Q KRKV QPKGAL VSASS KKILIMGGTRFIG+
Sbjct: 8 QQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMGGTRFIGL 67
Query: 240 FLSRLLVKEGHQVTLFTRGKAPIAQ 314
FLSR+LVKEGHQVTLFTRGK+PIA+
Sbjct: 68 FLSRILVKEGHQVTLFTRGKSPIAK 92