BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha25_contig00000008
         (541 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]   338   7e-91
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       298   4e-79
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa...   298   8e-79
emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]       297   1e-78
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   293   2e-77
ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   290   2e-76
gb|ABI34311.1| RNA dependent RNA polymerase family protein [Sola...   288   5e-76
ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   287   1e-75
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu...   286   2e-75
gb|AAT38699.2| RNA dependent RNA polymerase family protein [Sola...   286   2e-75
ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycoper...   286   2e-75
gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tu...   286   2e-75
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       285   5e-75
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      281   7e-74
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      280   2e-73
dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]      278   6e-73
ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis...   278   6e-73
gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]   278   8e-73
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   278   8e-73
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   277   1e-72

>gb|AHL27584.1| RNA-dependent RNA polymerase 1 [Salvia miltiorrhiza]
          Length = 1118

 Score =  338 bits (866), Expect = 7e-91
 Identities = 158/180 (87%), Positives = 169/180 (93%)
 Frame = -1

Query: 541  EESIKFDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGK 362
            EESIKFDEYTS+D +++VKGKVAVAKNPCLHPGDLRVL AIDVPALHHMV+CIVFP+KG 
Sbjct: 671  EESIKFDEYTSTDHNYIVKGKVAVAKNPCLHPGDLRVLEAIDVPALHHMVNCIVFPQKGT 730

Query: 361  RPHPNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNY 182
            RPHPNECSGSDLDGD+Y VCWD +LIPPKQ  PMDY+PAPATRLDHEVTI EVQEYFTNY
Sbjct: 731  RPHPNECSGSDLDGDIYIVCWDPDLIPPKQFDPMDYNPAPATRLDHEVTIQEVQEYFTNY 790

Query: 181  ILNESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            ILNESLGIIANAH VFADKEPSMALS PC+ELA LHSVAVDFPKTG+PAQIPPKLRVKEY
Sbjct: 791  ILNESLGIIANAHTVFADKEPSMALSSPCLELAQLHSVAVDFPKTGVPAQIPPKLRVKEY 850


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  298 bits (764), Expect = 4e-79
 Identities = 133/180 (73%), Positives = 159/180 (88%)
 Frame = -1

Query: 541  EESIKFDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGK 362
            EES  F++  S++ DF++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KGK
Sbjct: 733  EESHPFNDSGSANCDFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGK 792

Query: 361  RPHPNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNY 182
            RPHPNECSGSDLDGD+YFVCWD +LIPP+QV  MDY PAP T+LDH+VTI EV+EYFTNY
Sbjct: 793  RPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQSMDYTPAPTTQLDHDVTIEEVEEYFTNY 852

Query: 181  ILNESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            I+N+SLGIIANAH+VFAD+EP MA+S PC +LA L S+AVDFPKTG+PA+IP +LR KEY
Sbjct: 853  IINDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEY 912


>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
            gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
            [Nicotiana glutinosa]
          Length = 1117

 Score =  298 bits (762), Expect = 8e-79
 Identities = 131/180 (72%), Positives = 160/180 (88%)
 Frame = -1

Query: 541  EESIKFDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGK 362
            EES  F++  S++ DF+++G V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KGK
Sbjct: 734  EESHPFNDSGSTNCDFILEGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGK 793

Query: 361  RPHPNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNY 182
            RPHPNECSGSDLDGD+YFVCWD +L+PP+Q  PMDY PAP+T+LDH+VTI EV+EYFTNY
Sbjct: 794  RPHPNECSGSDLDGDIYFVCWDPDLVPPRQFQPMDYTPAPSTQLDHDVTIEEVEEYFTNY 853

Query: 181  ILNESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            I+N+SLGIIANAH+VFAD+EP MA+S PC +LA L S+AVDFPKTG+PA+IP +LR KEY
Sbjct: 854  IVNDSLGIIANAHVVFADREPDMAMSDPCKQLAQLFSIAVDFPKTGVPAEIPSQLRPKEY 913


>emb|CAA09896.1| RNA-directed RNA polymerase [Petunia x hybrida]
          Length = 775

 Score =  297 bits (761), Expect = 1e-78
 Identities = 130/180 (72%), Positives = 161/180 (89%)
 Frame = -1

Query: 541 EESIKFDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGK 362
           EES  F++  S++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KGK
Sbjct: 424 EESHHFNDSGSANYNFILKGNVVVAKNPCLHPGDIRVLKAVDVPALHHMVDCVVFPQKGK 483

Query: 361 RPHPNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNY 182
           RPHPNECSGSDLDGD+YFVCWD +LIPP+QV PMDY PAP+ +LDH+VTI EV+EYFTNY
Sbjct: 484 RPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSIQLDHDVTIEEVEEYFTNY 543

Query: 181 ILNESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
           ++N+ LG+IANAH+VFAD+EP+MA+S PC+ELA L S+AVDFPKTG+PA+IP +LR KEY
Sbjct: 544 MVNDGLGVIANAHVVFADREPNMAMSDPCIELAQLFSIAVDFPKTGVPAEIPSQLRPKEY 603


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  293 bits (750), Expect = 2e-77
 Identities = 135/175 (77%), Positives = 154/175 (88%)
 Frame = -1

Query: 526  FDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGKRPHPN 347
            +D  T+++    V+GKV VAKNPCLHPGD+RVLTA+DVP L HMVDC+VFPK GKRPHPN
Sbjct: 735  YDNSTANERFDPVRGKVVVAKNPCLHPGDVRVLTAVDVPELRHMVDCVVFPKNGKRPHPN 794

Query: 346  ECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNYILNES 167
            ECSGSDLDGD+YFVCWDS+LIP KQV PMDY+PAP TRLDH+VTI EV++YFTNYI+N+S
Sbjct: 795  ECSGSDLDGDIYFVCWDSDLIPTKQVEPMDYNPAPTTRLDHDVTIEEVEDYFTNYIVNDS 854

Query: 166  LGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            LGIIANAH VFADKEP MALS PC+ELA L S+AVDF KTGIPA+IPP LRVKEY
Sbjct: 855  LGIIANAHTVFADKEPLMALSEPCLELARLFSIAVDFNKTGIPAEIPPHLRVKEY 909


>ref|XP_006366109.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Solanum
            tuberosum] gi|565401229|ref|XP_006366110.1| PREDICTED:
            RNA-dependent RNA polymerase 1-like isoform X2 [Solanum
            tuberosum]
          Length = 1115

 Score =  290 bits (741), Expect = 2e-76
 Identities = 128/180 (71%), Positives = 158/180 (87%)
 Frame = -1

Query: 541  EESIKFDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGK 362
            E+   F+   S++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KGK
Sbjct: 731  EDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGK 790

Query: 361  RPHPNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNY 182
            RPHPNECSGSDLDGD+YFVCWD ++IPP+QV  M+Y PAP+ +LDH+VTI EV+EYFTNY
Sbjct: 791  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHDVTIEEVEEYFTNY 850

Query: 181  ILNESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            I+N+SLGIIANAH+VFAD+EP MA+S PC +LA L S+AVDFPKTG+PA+IPP+LR KEY
Sbjct: 851  IVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELCSIAVDFPKTGVPAEIPPQLRPKEY 910


>gb|ABI34311.1| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  288 bits (738), Expect = 5e-76
 Identities = 127/180 (70%), Positives = 158/180 (87%)
 Frame = -1

Query: 541  EESIKFDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGK 362
            E+   F+   S++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KGK
Sbjct: 579  EDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGK 638

Query: 361  RPHPNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNY 182
            RPHPNECSGSDLDGD+YFVCWD ++IPP+QV PM+Y PAP+ +LDH+VTI EV+EYFTNY
Sbjct: 639  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNY 698

Query: 181  ILNESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            I+N+SLGII+NAH+VFAD+EP MA+S PC +LA L S+AVDFPKTG+PA+IP +LR KEY
Sbjct: 699  IVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELCSIAVDFPKTGVPAEIPSQLRPKEY 758


>ref|XP_006366108.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Solanum tuberosum]
          Length = 1115

 Score =  287 bits (735), Expect = 1e-75
 Identities = 127/180 (70%), Positives = 157/180 (87%)
 Frame = -1

Query: 541  EESIKFDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGK 362
            E+   F+   S++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KGK
Sbjct: 731  EDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGK 790

Query: 361  RPHPNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNY 182
            RPHPNECSGSDLDGD+YFVCWD ++IPP+QV  M+Y PAP+ +LDH+VTI EV+EYFTNY
Sbjct: 791  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHDVTIEEVEEYFTNY 850

Query: 181  ILNESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            I+N+SLGIIANAH+VFAD+EP MA+S PC +LA L S+AVDFPKTG+PA+IP +LR KEY
Sbjct: 851  IVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEY 910


>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1115

 Score =  286 bits (733), Expect = 2e-75
 Identities = 127/180 (70%), Positives = 156/180 (86%)
 Frame = -1

Query: 541  EESIKFDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGK 362
            E+   F+   S++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KGK
Sbjct: 731  EDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGK 790

Query: 361  RPHPNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNY 182
            RPHPNECSGSDLDGD+YFVCWD ++IPP+QV  M+Y PAP+ +LDH VTI EV+EYFTNY
Sbjct: 791  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHNVTIEEVEEYFTNY 850

Query: 181  ILNESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            I+N+SLGIIANAH+VFAD+EP MA+S PC +LA L S+AVDFPKTG+PA+IP +LR KEY
Sbjct: 851  IVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEY 910


>gb|AAT38699.2| RNA dependent RNA polymerase family protein [Solanum demissum]
          Length = 963

 Score =  286 bits (733), Expect = 2e-75
 Identities = 127/180 (70%), Positives = 156/180 (86%)
 Frame = -1

Query: 541  EESIKFDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGK 362
            E+   F+   S++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KGK
Sbjct: 579  EDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGK 638

Query: 361  RPHPNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNY 182
            RPHPNECSGSDLDGD+YFVCWD ++IPP+QV  M+Y PAP+ +LDH VTI EV+EYFTNY
Sbjct: 639  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEYPPAPSIQLDHNVTIEEVEEYFTNY 698

Query: 181  ILNESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            I+N+SLGIIANAH+VFAD+EP MA+S PC +LA L S+AVDFPKTG+PA+IP +LR KEY
Sbjct: 699  IVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEY 758


>ref|NP_001234319.1| RNA-directed RNA polymerase [Solanum lycopersicum]
            gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase
            [Solanum lycopersicum]
          Length = 1114

 Score =  286 bits (733), Expect = 2e-75
 Identities = 126/175 (72%), Positives = 156/175 (89%)
 Frame = -1

Query: 526  FDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGKRPHPN 347
            F+   S++S+F++KG V VAKNPCLHPGD+RVL A++V ALHHMVDC+VFP+KGKRPHPN
Sbjct: 736  FNNSRSTNSNFILKGNVVVAKNPCLHPGDIRVLKAVNVRALHHMVDCVVFPQKGKRPHPN 795

Query: 346  ECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNYILNES 167
            ECSGSDLDGD+YFVCWD ++IPP+QV PM+Y PAP+ +LDH+VTI EV+EYFTNYI+N+S
Sbjct: 796  ECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDS 855

Query: 166  LGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            LGIIANAH+VFAD+EP MA+S PC +LA L S+AVDFPKTG+PA+IP +LR KEY
Sbjct: 856  LGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEY 910


>gb|ABO93006.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
          Length = 1065

 Score =  286 bits (732), Expect = 2e-75
 Identities = 126/180 (70%), Positives = 157/180 (87%)
 Frame = -1

Query: 541  EESIKFDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGK 362
            E+   F+   S++ +F++KG V VAKNPCLHPGD+RVL A+DVPALHHMVDC+VFP+KGK
Sbjct: 730  EDLHPFNNSRSTNCNFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGK 789

Query: 361  RPHPNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNY 182
            RPHPNECSGSDLDGD+YFVCWD ++IPP+QV PM+Y PAP+ +LDH+VTI EV+EYFTNY
Sbjct: 790  RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNY 849

Query: 181  ILNESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            I+N+SLGII+NAH+VFAD+EP MA+S PC +LA L S+AVDFPKTG+PA+IP + R KEY
Sbjct: 850  IVNDSLGIISNAHVVFADREPDMAMSDPCKKLAELCSIAVDFPKTGVPAEIPSQWRPKEY 909


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  285 bits (729), Expect = 5e-75
 Identities = 129/171 (75%), Positives = 147/171 (85%)
 Frame = -1

Query: 514  TSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGKRPHPNECSG 335
            T S  +++V G+V VAKNPCLHPGD+RVL A++VPALHHMVDC+VFP+KG RPHPNECSG
Sbjct: 754  TGSGQNYIVVGRVVVAKNPCLHPGDVRVLRAVNVPALHHMVDCVVFPQKGSRPHPNECSG 813

Query: 334  SDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNYILNESLGII 155
            SDLDGD+YFVCWD ELIP KQ  PMDY PAP TRLDH+V I EVQEYFTNYI+N+SLGII
Sbjct: 814  SDLDGDIYFVCWDDELIPQKQFEPMDYSPAPTTRLDHDVRIEEVQEYFTNYIVNDSLGII 873

Query: 154  ANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            ANAH  FADKEPS A+SP C+ELA L S+AVDFPKTG+PA IP +L VKEY
Sbjct: 874  ANAHTAFADKEPSKAMSPSCIELARLFSIAVDFPKTGVPAVIPQELYVKEY 924


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  281 bits (719), Expect = 7e-74
 Identities = 128/177 (72%), Positives = 153/177 (86%), Gaps = 2/177 (1%)
 Frame = -1

Query: 526  FDEYTSSDSD--FVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGKRPH 353
            F +++ S S+  F+V+GKV VAKNPCLHPGD+RVL A++VP LHHMVDC+VFP+KG RPH
Sbjct: 725  FVQFSGSRSERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGTRPH 784

Query: 352  PNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNYILN 173
            PNECSGSDLDGDVYFVCWD ELIP KQ+ PMDY PA  T+LDHEVTI E++EYFTNYI+N
Sbjct: 785  PNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEIEEYFTNYIVN 844

Query: 172  ESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            +SLGII+NAH  FAD+EP  A+S PC+ELA L S+AVDFPKTG+PA+IP +LRVKEY
Sbjct: 845  DSLGIISNAHTAFADREPDKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEY 901


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  280 bits (715), Expect = 2e-73
 Identities = 127/177 (71%), Positives = 153/177 (86%), Gaps = 2/177 (1%)
 Frame = -1

Query: 526  FDEYTSSDSD--FVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGKRPH 353
            F +++ S S+  F+V+GKV VAKNPCLHPGD+RVL A++VP LHHMVDC+VFP+KG RPH
Sbjct: 725  FVQFSGSRSERRFIVQGKVIVAKNPCLHPGDVRVLRAVNVPDLHHMVDCVVFPQKGTRPH 784

Query: 352  PNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNYILN 173
            PNECSGSDLDGDVYFVCWD ELIP KQ+ PMDY PA  T+LDHEVTI E++EYFTNYI+N
Sbjct: 785  PNECSGSDLDGDVYFVCWDPELIPYKQIDPMDYSPASTTKLDHEVTIEEIEEYFTNYIVN 844

Query: 172  ESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            +SLGII+NAH  FAD+EP  A+S PC+ELA L S+AVDFPKTG+PA+IP +LRVKE+
Sbjct: 845  DSLGIISNAHTAFADREPGKAMSRPCLELAKLFSIAVDFPKTGVPAEIPQELRVKEF 901


>dbj|BAL63010.1| RNA-dependent RNA polymerase 1 [Cucumis sativus]
          Length = 1115

 Score =  278 bits (711), Expect = 6e-73
 Identities = 123/169 (72%), Positives = 145/169 (85%)
 Frame = -1

Query: 508  SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGKRPHPNECSGSD 329
            S+  F+V G V VAKNPCLHPGD+RVLTA+DVP+LHHM+DC+VFP+KG RPHPNECSGSD
Sbjct: 752  SNRHFIVTGTVVVAKNPCLHPGDVRVLTAVDVPSLHHMIDCVVFPQKGSRPHPNECSGSD 811

Query: 328  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNYILNESLGIIAN 149
            LDGD+YFVCWD +LIPP+QV PMDY P P+  LDH+VT+ EVQEYF NY++N+SLGIIAN
Sbjct: 812  LDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIAN 871

Query: 148  AHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            AH  FADKEP  A+S PC++LA L S+AVDFPKTG+PA IP  LRVKEY
Sbjct: 872  AHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALIPANLRVKEY 920


>ref|NP_001267682.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
            gi|316989901|gb|ADU77016.1| RNA-dependent RNA polymerase
            1b [Cucumis sativus]
          Length = 1115

 Score =  278 bits (711), Expect = 6e-73
 Identities = 123/169 (72%), Positives = 145/169 (85%)
 Frame = -1

Query: 508  SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGKRPHPNECSGSD 329
            S+  F+V G V VAKNPCLHPGD+RVLTA+DVP+LHHM+DC+VFP+KG RPHPNECSGSD
Sbjct: 752  SNRHFIVTGTVVVAKNPCLHPGDVRVLTAVDVPSLHHMIDCVVFPQKGSRPHPNECSGSD 811

Query: 328  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNYILNESLGIIAN 149
            LDGD+YFVCWD +LIPP+QV PMDY P P+  LDH+VT+ EVQEYF NY++N+SLGIIAN
Sbjct: 812  LDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIAN 871

Query: 148  AHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            AH  FADKEP  A+S PC++LA L S+AVDFPKTG+PA IP  LRVKEY
Sbjct: 872  AHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALIPANLRVKEY 920


>gb|AHL27585.1| RNA-dependent RNA polymerase 2 [Salvia miltiorrhiza]
          Length = 1101

 Score =  278 bits (710), Expect = 8e-73
 Identities = 130/165 (78%), Positives = 142/165 (86%)
 Frame = -1

Query: 496  FVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGKRPHPNECSGSDLDGD 317
            + V GKVAVAKNPCLHPGD+RVL A+DVP L HMVDC+VFP+KG+RPHPNECSGSDLDGD
Sbjct: 742  YTVTGKVAVAKNPCLHPGDVRVLRAVDVPELQHMVDCVVFPRKGRRPHPNECSGSDLDGD 801

Query: 316  VYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNYILNESLGIIANAHIV 137
             YFVCWD ELIPP Q SPM Y+PAP T LDH VTI EV+EYFTNYI+N+SLGIIANAH  
Sbjct: 802  RYFVCWDPELIPPNQESPMTYNPAPNTLLDHNVTIEEVEEYFTNYIVNDSLGIIANAHTA 861

Query: 136  FADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            FADKE   ALS PC+ELA L SVAVDFPKTGIPA+IPP LRVKEY
Sbjct: 862  FADKERDGALSSPCLELAQLFSVAVDFPKTGIPAEIPPHLRVKEY 906


>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
            gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
            1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
            RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
            cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
            polymerase 1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  278 bits (710), Expect = 8e-73
 Identities = 126/169 (74%), Positives = 146/169 (86%)
 Frame = -1

Query: 508  SDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGKRPHPNECSGSD 329
            S+  F+V+GKV VAKNPCLHPGD+RVLTA++VP LHHMVDC+VFP+KG RPHPNECSGSD
Sbjct: 733  SEQRFIVQGKVVVAKNPCLHPGDVRVLTAVNVPDLHHMVDCVVFPQKGSRPHPNECSGSD 792

Query: 328  LDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNYILNESLGIIAN 149
            LDGD+YFVCWD ELIP KQ+ PMDY PAP   L+HEVTI EV+EYFTNYI+N+SLGIIAN
Sbjct: 793  LDGDIYFVCWDPELIPSKQIPPMDYSPAPTKPLEHEVTIEEVEEYFTNYIVNDSLGIIAN 852

Query: 148  AHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            AH VFAD+EP  A+S  C  LA L S+AVDFPKTG+PA+IP +LRVKEY
Sbjct: 853  AHTVFADREPRKAMSSECKWLAKLFSIAVDFPKTGVPAEIPQELRVKEY 901


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  277 bits (708), Expect = 1e-72
 Identities = 125/179 (69%), Positives = 149/179 (83%)
 Frame = -1

Query: 538  ESIKFDEYTSSDSDFVVKGKVAVAKNPCLHPGDLRVLTAIDVPALHHMVDCIVFPKKGKR 359
            +S+ F    S   +F+++GK+ VAKNPCLHPGD+RVL A++VP LHHMVDC+VFP+KGKR
Sbjct: 735  DSLMFRGSGSHHDNFILEGKIVVAKNPCLHPGDVRVLWAVNVPTLHHMVDCVVFPQKGKR 794

Query: 358  PHPNECSGSDLDGDVYFVCWDSELIPPKQVSPMDYDPAPATRLDHEVTIGEVQEYFTNYI 179
            PHPNECSGSDLDGD+YFVCWD +LIPP+Q++PMDY PAP   LDH+V I EV+EYFTNYI
Sbjct: 795  PHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNYI 854

Query: 178  LNESLGIIANAHIVFADKEPSMALSPPCVELAMLHSVAVDFPKTGIPAQIPPKLRVKEY 2
            +N+SLGIIANAH VFADKE   A   PC ELA L S+AVDFPKTG+PA+IP  LRVKEY
Sbjct: 855  VNDSLGIIANAHTVFADKEYDKAYCDPCTELAKLFSIAVDFPKTGVPAEIPRNLRVKEY 913