BLASTX nr result

ID: Mentha24_contig00048499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00048499
         (428 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU45554.1| hypothetical protein MIMGU_mgv1a022804mg, partial...    58   2e-06
ref|XP_006363470.1| PREDICTED: F-box protein CPR30-like [Solanum...    56   4e-06
gb|EXB41587.1| F-box protein [Morus notabilis]                         55   1e-05
gb|EXB41581.1| F-box protein [Morus notabilis]                         55   1e-05

>gb|EYU45554.1| hypothetical protein MIMGU_mgv1a022804mg, partial [Mimulus
           guttatus]
          Length = 346

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
 Frame = +1

Query: 37  VVVKPHVFPLSSILSKSDESAPFRLP---LFNCDASCGELWCVEFENSLILHNPTTQRYR 207
           +V KP + P  +I        P   P   L N   SC  L  ++F   LIL NP+T+++ 
Sbjct: 98  LVNKPEITPTLNI------DIPMPTPNACLVNIMGSCNGLILIKFRK-LILWNPSTRKHM 150

Query: 208 KLPIPSARVPIXXXXXXXXXXXXXXFVYGLGYDCVGDDYKILKIHRS----LDVETELYS 375
            +P PS   PI                YGLGYD   DDYK++ I +S      ++T++YS
Sbjct: 151 VIPSPSFD-PIPQQDLFHVRLYRIR--YGLGYDEANDDYKVVSIRQSDYQQPHLQTKVYS 207

Query: 376 LKTDSWTKVK 405
            KTDSW +++
Sbjct: 208 SKTDSWKEIE 217


>ref|XP_006363470.1| PREDICTED: F-box protein CPR30-like [Solanum tuberosum]
          Length = 386

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
 Frame = +1

Query: 43  VKPHVFPLSSILSKSD----ESAPFRLPLFNCD------ASCGELWCVEFE-NSLILHNP 189
           +K HV    S+ S  +    ES     PL N +       S   L C++ E N L+L NP
Sbjct: 73  IKQHVLRECSVSSLHNDSVVESLDLNYPLKNPELRVCIVGSVNGLICLDIEDNDLVLWNP 132

Query: 190 TTQRYRKLPIPSARVPIXXXXXXXXXXXXXXFVYGLGYDCVGDDYKILKIHRS---LDVE 360
           T + YRKLP    RV                 +YG GYD   DDYK++ +  S     +E
Sbjct: 133 TLRVYRKLPDSRLRV-----SGGSRLDRITSVMYGFGYDEFSDDYKVVGVRCSCTRYPLE 187

Query: 361 TELYSLKTDSW 393
            ++YSLK +SW
Sbjct: 188 VKIYSLKNNSW 198


>gb|EXB41587.1| F-box protein [Morus notabilis]
          Length = 392

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
 Frame = +1

Query: 166 NSLILHNPTTQRYRKLPIPSARVPIXXXXXXXXXXXXXXFVYGLGYDCVGDDYKILKI-- 339
           N ++  NP+T+RY+KLPI +  V +                YG G+D V DDYK++KI  
Sbjct: 107 NDIVFWNPSTKRYKKLPISNVNVNVSTSSARNLD------FYGFGHDPVTDDYKLVKITF 160

Query: 340 --HRSLDVETELYSLKTDSWTKV 402
                 D E ++YS K +SW ++
Sbjct: 161 LAGNPFDSEVKVYSAKANSWKRI 183


>gb|EXB41581.1| F-box protein [Morus notabilis]
          Length = 406

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
 Frame = +1

Query: 133 SC-GELWCVEFENSLILHNPTTQRYRKLPIPSARVPIXXXXXXXXXXXXXXFVYGLGYDC 309
           SC G L  +   + + L NP+T+RYRK+PI +   P                VYG GYD 
Sbjct: 94  SCHGLLVLLNINDVVALWNPSTRRYRKIPISNIEFP------DGILPCFQFIVYGFGYDP 147

Query: 310 VGDDYKILKI--------HRSLDVETELYSLKTDSWTKVK 405
           V +DYK++++          S D E ++YS K+++W +++
Sbjct: 148 VSNDYKLVRMVQFFGNVGEDSFDSEVKVYSAKSNTWKRIR 187


Top