BLASTX nr result

ID: Mentha24_contig00048226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00048226
         (514 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283424.2| PREDICTED: uncharacterized protein LOC100246...    65   1e-08
emb|CBI16489.3| unnamed protein product [Vitis vinifera]               65   1e-08
ref|XP_007014745.1| RNA-binding KH domain-containing protein, pu...    64   3e-08
ref|XP_007014743.1| RNA-binding KH domain-containing protein, pu...    64   3e-08

>ref|XP_002283424.2| PREDICTED: uncharacterized protein LOC100246694 [Vitis vinifera]
          Length = 866

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 63/178 (35%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
 Frame = -3

Query: 512 STTPNTACDDNVYT-NRSQGM-PSSVTAPAHANXXXXXXXXXXXXXXXXXT-WFPLGPTQ 342
           STTP +   DNV   N+SQ + P++V  P                       WFP+GP  
Sbjct: 259 STTPTSVSGDNVNVHNQSQEVVPTTVVNPGVVQPVSGPSQTPPQGQFQYPGPWFPIGPPP 318

Query: 341 TP-YQQSGLVNPANA---FHNNTVQVSS---SPINTPSMFGPRPGIPASFSPVLQNSSAG 183
            P +  SG + P+N      NN   + S   S  N PS+FGPRP   A F  VL+N S  
Sbjct: 319 IPMHLPSGFIPPSNPSAQILNNPPHLPSPSFSASNMPSLFGPRPSPAAGFGSVLRNPS-- 376

Query: 182 PQPLYVQQAPGRPQPPYMHQA--PPLTGWAGPPHNHPLTSKPPFSANESAGWLPSPVS 15
           P PL  Q +    Q PYM QA  P L         HPL ++P  SA      LP PV+
Sbjct: 377 PVPLRPQSSIQMLQRPYMPQANLPMLA-------QHPLLAQPNVSAP-----LPFPVN 422


>emb|CBI16489.3| unnamed protein product [Vitis vinifera]
          Length = 886

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 63/178 (35%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
 Frame = -3

Query: 512 STTPNTACDDNVYT-NRSQGM-PSSVTAPAHANXXXXXXXXXXXXXXXXXT-WFPLGPTQ 342
           STTP +   DNV   N+SQ + P++V  P                       WFP+GP  
Sbjct: 279 STTPTSVSGDNVNVHNQSQEVVPTTVVNPGVVQPVSGPSQTPPQGQFQYPGPWFPIGPPP 338

Query: 341 TP-YQQSGLVNPANA---FHNNTVQVSS---SPINTPSMFGPRPGIPASFSPVLQNSSAG 183
            P +  SG + P+N      NN   + S   S  N PS+FGPRP   A F  VL+N S  
Sbjct: 339 IPMHLPSGFIPPSNPSAQILNNPPHLPSPSFSASNMPSLFGPRPSPAAGFGSVLRNPS-- 396

Query: 182 PQPLYVQQAPGRPQPPYMHQA--PPLTGWAGPPHNHPLTSKPPFSANESAGWLPSPVS 15
           P PL  Q +    Q PYM QA  P L         HPL ++P  SA      LP PV+
Sbjct: 397 PVPLRPQSSIQMLQRPYMPQANLPMLA-------QHPLLAQPNVSAP-----LPFPVN 442


>ref|XP_007014745.1| RNA-binding KH domain-containing protein, putative isoform 3
           [Theobroma cacao] gi|508785108|gb|EOY32364.1|
           RNA-binding KH domain-containing protein, putative
           isoform 3 [Theobroma cacao]
          Length = 762

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
 Frame = -3

Query: 365 WFPLGPTQTPYQQSGLVNPANAFHNNTVQVSSSPINTPSMFGPRPGIPASFSPVLQNSS- 189
           WFP GPT         +N      N+ V   SSP N PS+FGP+P   A ++ +LQNSS 
Sbjct: 224 WFPAGPTP--------LNFTAPIFNSPVSAQSSPSNLPSLFGPQPAPAAGYNSILQNSSF 275

Query: 188 AGPQPLYVQQAPGRPQPPYMHQAPPLTGWAGPPHNHPLTSKPPFSANES 42
               P   +Q   +P  P MH   PL    GPP N  L +  P SA  S
Sbjct: 276 ISSSPQLPRQVLSQPYTPQMH---PLV-HTGPPRNLILLNPNPASAQPS 320


>ref|XP_007014743.1| RNA-binding KH domain-containing protein, putative isoform 1
           [Theobroma cacao] gi|590582873|ref|XP_007014744.1|
           RNA-binding KH domain-containing protein, putative
           isoform 1 [Theobroma cacao] gi|508785106|gb|EOY32362.1|
           RNA-binding KH domain-containing protein, putative
           isoform 1 [Theobroma cacao] gi|508785107|gb|EOY32363.1|
           RNA-binding KH domain-containing protein, putative
           isoform 1 [Theobroma cacao]
          Length = 872

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 42/109 (38%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
 Frame = -3

Query: 365 WFPLGPTQTPYQQSGLVNPANAFHNNTVQVSSSPINTPSMFGPRPGIPASFSPVLQNSS- 189
           WFP GPT         +N      N+ V   SSP N PS+FGP+P   A ++ +LQNSS 
Sbjct: 334 WFPAGPTP--------LNFTAPIFNSPVSAQSSPSNLPSLFGPQPAPAAGYNSILQNSSF 385

Query: 188 AGPQPLYVQQAPGRPQPPYMHQAPPLTGWAGPPHNHPLTSKPPFSANES 42
               P   +Q   +P  P MH   PL    GPP N  L +  P SA  S
Sbjct: 386 ISSSPQLPRQVLSQPYTPQMH---PLV-HTGPPRNLILLNPNPASAQPS 430


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