BLASTX nr result

ID: Mentha24_contig00048001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00048001
         (539 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago trunc...   117   1e-24
ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago ...   102   3e-22
emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera]    73   4e-11
ref|XP_002523276.1| conserved hypothetical protein [Ricinus comm...    63   5e-08

>ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago truncatula]
           gi|355522519|gb|AET02973.1| NADH dehydrogenase subunit F
           [Medicago truncatula]
          Length = 187

 Score =  117 bits (294), Expect = 1e-24
 Identities = 58/63 (92%), Positives = 60/63 (95%), Gaps = 1/63 (1%)
 Frame = +1

Query: 244 GSLISTPPVLVRSGPWSSVSGLPADKISEIDQPAGLVWLFFSIE-KESAVCASHLLIGSA 420
           GSLISTPPVL+RSGPWSSVSG PADKISEIDQPAGLVWLF SIE KESAVCASHLL+GSA
Sbjct: 19  GSLISTPPVLIRSGPWSSVSGFPADKISEIDQPAGLVWLFLSIEKKESAVCASHLLLGSA 78

Query: 421 GRH 429
           GRH
Sbjct: 79  GRH 81


>ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago truncatula]
           gi|355477332|gb|AES58535.1| hypothetical protein
           MTR_1g005250 [Medicago truncatula]
          Length = 197

 Score =  102 bits (253), Expect(2) = 3e-22
 Identities = 57/86 (66%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
 Frame = +1

Query: 244 GSLISTPPVLVRSGPWSSVSGLPADKISEIDQPAGLVWLFFSIE-KESAVCASHLLIGSA 420
           GSLISTPPVL+RSGPWSSVSGLPADKISEIDQPAGLVWLF SIE KESAVC         
Sbjct: 37  GSLISTPPVLIRSGPWSSVSGLPADKISEIDQPAGLVWLFLSIEKKESAVC--------- 87

Query: 421 GRHGIFVQI**IKAGRTCDGSQGFNM 498
                        AGRTCDGS   N+
Sbjct: 88  -------------AGRTCDGSPRSNI 100



 Score = 28.9 bits (63), Expect(2) = 3e-22
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 495 YDHLGLRCHD 524
           YDHLGLRCHD
Sbjct: 101 YDHLGLRCHD 110


>emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera]
          Length = 124

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 45/88 (51%), Positives = 47/88 (53%)
 Frame = +1

Query: 88  MAFSEPLVAYVVVGIPTCSSLPPYLRIQRWPLDVVVTA*AWLILSEKKVGFWGSLISTPP 267
           +AFS+PLVAYVVVGIPT                                        TPP
Sbjct: 21  LAFSQPLVAYVVVGIPT----------------------------------------TPP 40

Query: 268 VLVRSGPWSSVSGLPADKISEIDQPAGL 351
           VLVRSG WSSVSGLPADKISEIDQPAGL
Sbjct: 41  VLVRSGLWSSVSGLPADKISEIDQPAGL 68


>ref|XP_002523276.1| conserved hypothetical protein [Ricinus communis]
           gi|223537489|gb|EEF39115.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 136

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 39/88 (44%), Positives = 42/88 (47%)
 Frame = -1

Query: 380 SFSIEKNSQTNPAGWSISEILSAGKPETDDHGPDLTSTGGVLINEPQKPTFFSDKINQA* 201
           SF  E+NSQT P  WSIS+ILS GK ETD+ GPDLTST GV                   
Sbjct: 84  SFEAERNSQTKPVVWSISKILSIGKLETDNQGPDLTSTRGV------------------- 124

Query: 200 AVTTTSKGHLWILK*GGKEEHVGMPTTT 117
                            KEEHVGMPT T
Sbjct: 125 ----------------HKEEHVGMPTPT 136


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