BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00047379
         (518 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA93896.1| retrotransposon protein, putative, unclassified [...    57   3e-06
gb|ABF98227.1| retrotransposon protein, putative, unclassified [...    57   3e-06
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]      57   3e-06
gb|ABA95339.2| retrotransposon protein, putative, unclassified [...    56   6e-06

>gb|ABA93896.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 897

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
 Frame = +2

Query: 101 SLVIWIFCW----RNIQMSLLNQWGCRHAGE*SITFSFIQALPQSIRIPGLLQPLPIPHT 268
           S V W+F W    R +Q  + +   C+HA              + +R PGLLQPLP+P  
Sbjct: 500 SRVKWLFAWTGLKRAVQTFVTDCAVCKHAKS------------ERMRYPGLLQPLPVPDQ 547

Query: 269 AWTHISLDF*EGLPKS 316
           AW  +SLDF EGLPKS
Sbjct: 548 AWETVSLDFIEGLPKS 563


>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1160

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = +2

Query: 209 ALPQSIRIPGLLQPLPIPHTAWTHISLDF*EGLPKS 316
           A P+ I +PGLL PL IP  AWTHIS+DF EGLPKS
Sbjct: 857 AKPEHIHVPGLLDPLQIPEMAWTHISMDFIEGLPKS 892


>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1246

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = +2

Query: 209  ALPQSIRIPGLLQPLPIPHTAWTHISLDF*EGLPKS 316
            A P+ I +PGLL PL IP  AWTHIS+DF EGLPKS
Sbjct: 943  AKPEHIHVPGLLDPLQIPEMAWTHISMDFIEGLPKS 978


>gb|ABA95339.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1348

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/38 (63%), Positives = 30/38 (78%)
 Frame = +2

Query: 203  IQALPQSIRIPGLLQPLPIPHTAWTHISLDF*EGLPKS 316
            IQA P+ ++ PGLLQPLP+P  AW  I++DF EGLPKS
Sbjct: 935  IQAKPERVKYPGLLQPLPVPEGAWQTITMDFLEGLPKS 972