BLASTX nr result

ID: Mentha24_contig00046478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00046478
         (330 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006372890.1| hypothetical protein POPTR_0017s06030g [Popu...    59   7e-07
ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containin...    56   5e-06
emb|CBI36846.3| unnamed protein product [Vitis vinifera]               56   5e-06

>ref|XP_006372890.1| hypothetical protein POPTR_0017s06030g [Populus trichocarpa]
            gi|550319538|gb|ERP50687.1| hypothetical protein
            POPTR_0017s06030g [Populus trichocarpa]
          Length = 1056

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = -2

Query: 320  VTTRKSMLVSKPISYVFVLQPPSIFQFGDYERTLHKQLH 204
            VTTRK M+VSKPISYVF+LQPP+  QFG+Y   L K LH
Sbjct: 1003 VTTRKPMMVSKPISYVFILQPPTDVQFGNYAAILQKHLH 1041


>ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis
            vinifera]
          Length = 1014

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = -2

Query: 326  DEVTTRKSMLVSKPISYVFVLQPPSIFQFGDYERTLHKQLHGT 198
            D+VTT+K MLVS+  SYVF LQPP+   FGDY    +K+LHGT
Sbjct: 971  DKVTTKKPMLVSRATSYVFNLQPPTDILFGDYATAFNKRLHGT 1013


>emb|CBI36846.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = -2

Query: 326  DEVTTRKSMLVSKPISYVFVLQPPSIFQFGDYERTLHKQLHGT 198
            D+VTT+K MLVS+  SYVF LQPP+   FGDY    +K+LHGT
Sbjct: 964  DKVTTKKPMLVSRATSYVFNLQPPTDILFGDYATAFNKRLHGT 1006


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