BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00046475
         (564 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   233   2e-59
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     219   4e-55
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   218   9e-55
emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]         209   3e-52
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc...   209   4e-52
gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]     209   4e-52
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...   209   5e-52
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   207   1e-51
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        207   2e-51
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   205   8e-51
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]     205   8e-51
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   204   1e-50
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...   196   3e-48
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     196   3e-48
gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subc...   178   1e-42
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]   175   6e-42
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D...   174   2e-41
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]   170   3e-40
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]         164   1e-38
gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       163   3e-38

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  233 bits (595), Expect = 2e-59
 Identities = 109/188 (57%), Positives = 139/188 (73%)
 Frame = +1

Query: 1   CYFVPSITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLDCVQNNFN 180
           CY+VP+I +NIIS+  LDM+GFHF   N  CSF  +++ YG+A L NGL++L+     +N
Sbjct: 8   CYYVPAINKNIISVSCLDMEGFHFSIKNKCCSFDRDDMFYGSAPLDNGLHVLNQSMPIYN 67

Query: 181 ISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGKMTN 360
           I  K+ K  ++N  T+LWHCRLGHINEK I +L     L SFD+ESY  CESCL GKMT 
Sbjct: 68  IRTKKFKSNDLNP-TFLWHCRLGHINEKHIQKLHSDGLLNSFDYESYETCESCLLGKMTK 126

Query: 361 KPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSEAFE 540
            P +G   RA ++L L+HTDVCGP+ST ARG Y YFITFTDDFSR+GYVYL+KHKS++FE
Sbjct: 127 APFTGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMKHKSKSFE 186

Query: 541 KFKEYKLE 564
            FKE++ E
Sbjct: 187 NFKEFQNE 194


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  219 bits (558), Expect = 4e-55
 Identities = 102/188 (54%), Positives = 134/188 (71%)
 Frame = +1

Query: 1   CYFVPSITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLDCVQNNFN 180
           CY VP++ +N+IS   L  +G+ F   N  CS  + ++ Y +A LVNGLY+L+   +   
Sbjct: 363 CYCVPTLCQNVISASCLQAEGYDFRSMNNGCSIYLRDMFYFHAPLVNGLYVLNLEASPIY 422

Query: 181 ISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGKMTN 360
             N   +L N  N T++WHCRLGHIN+KR+ +L K   L SFDFES+  CESCL GKMT 
Sbjct: 423 NINTERQLSNDINPTFIWHCRLGHINKKRMEKLHKDGLLHSFDFESFETCESCLLGKMTK 482

Query: 361 KPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSEAFE 540
            P +G   RA ++L LVHTDVCGP+S+ ARGGY YFITFTDDFSR+GY+YL++HKSE+FE
Sbjct: 483 APFTGHSERASDLLALVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIYLMRHKSESFE 542

Query: 541 KFKEYKLE 564
           KFKE++ E
Sbjct: 543 KFKEFQNE 550


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  218 bits (555), Expect = 9e-55
 Identities = 101/189 (53%), Positives = 141/189 (74%), Gaps = 1/189 (0%)
 Frame = +1

Query: 1    CYFVPSITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLDCVQNN-F 177
            CY+VP+++RNIIS   L  +G+ F   +  CS  +N++ YG A ++NGL++L+      F
Sbjct: 451  CYYVPAMSRNIISASCLMTEGYKFIIEDHGCSIFLNDMFYGYAPVLNGLFILNLDDAPIF 510

Query: 178  NISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGKMT 357
            NI+ KR +  NMN+ T++WHCRLGHI+EKR+ +L     L SFD ES+  CESC+ GKMT
Sbjct: 511  NINAKRLRPNNMNS-TFIWHCRLGHISEKRMKKLHDDGILNSFDLESFETCESCILGKMT 569

Query: 358  NKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSEAF 537
              P +G+  RA ++L L+HTDVCGP+ST ARGG+ YFITFTDD+SR+GY+YL++HKSE+F
Sbjct: 570  KTPFTGRNERASDLLALIHTDVCGPMSTTARGGFQYFITFTDDYSRYGYIYLMRHKSESF 629

Query: 538  EKFKEYKLE 564
            EKFKE++ E
Sbjct: 630  EKFKEFQNE 638


>emb|CAE04999.2| OSJNBb0093G06.7 [Oryza sativa Japonica Group]
          Length = 923

 Score =  209 bits (533), Expect = 3e-52
 Identities = 98/191 (51%), Positives = 134/191 (70%), Gaps = 3/191 (1%)
 Frame = +1

Query: 1   CYFVPSITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLD---CVQN 171
           CY +P++ +N+IS   L  +G+ F   +  CS   N+I Y NA ++NGLY+++   C   
Sbjct: 322 CYCIPALCKNVISASCLQAEGYGFRSVDNGCSVYYNDIFYFNAPMMNGLYIVNLDGCSVY 381

Query: 172 NFNISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGK 351
           N N   +RP   N  N T++WHCR GHINEK + +L +   L SF FES+  CESCL GK
Sbjct: 382 NINAKRQRP---NDLNPTFIWHCRFGHINEKCMEKLNRDGLLHSFGFESFETCESCLLGK 438

Query: 352 MTNKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSE 531
           MT  P +G+  RA E+L LVHTD+CGP+S+ A+GG+ YFITFTDDFSR+GYVYL++HKSE
Sbjct: 439 MTKAPFTGQSERASELLGLVHTDICGPMSSTAKGGFGYFITFTDDFSRYGYVYLMRHKSE 498

Query: 532 AFEKFKEYKLE 564
           +FEKFK+++ E
Sbjct: 499 SFEKFKKFQNE 509


>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1073

 Score =  209 bits (532), Expect = 4e-52
 Identities = 99/191 (51%), Positives = 134/191 (70%), Gaps = 3/191 (1%)
 Frame = +1

Query: 1    CYFVPSITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLD---CVQN 171
            CY +P++ +N+IS   L  +G+ F   +  CS   N++ Y +A ++NGLY+++   C   
Sbjct: 455  CYCIPALCKNVISASCLQAEGYGFRSMDNGCSVYYNDLFYFHAPMMNGLYIVNLDGCSVY 514

Query: 172  NFNISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGK 351
            N N   + P   N  N T++WHCRLGHINEKR+ +L +   L SFDFES+  CESCL GK
Sbjct: 515  NINAKRQHP---NDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFETCESCLLGK 571

Query: 352  MTNKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSE 531
            MT  P +G+  RA E+L LVHTDVCGP+S+ ARGG+ YFITFTDDFSR GYVYL++HKSE
Sbjct: 572  MTKAPFTGQSKRASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSRCGYVYLMRHKSE 631

Query: 532  AFEKFKEYKLE 564
            + EKFK+++ E
Sbjct: 632  SVEKFKKFQNE 642


>gb|AAR06328.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1063

 Score =  209 bits (532), Expect = 4e-52
 Identities = 99/191 (51%), Positives = 134/191 (70%), Gaps = 3/191 (1%)
 Frame = +1

Query: 1    CYFVPSITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLD---CVQN 171
            CY +P++ +N+IS   L  +G+ F   +  CS   N++ Y +A ++NGLY+++   C   
Sbjct: 455  CYCIPALCKNVISASCLQAEGYGFRSMDNGCSVYYNDLFYFHAPMMNGLYIVNLDGCSVY 514

Query: 172  NFNISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGK 351
            N N   + P   N  N T++WHCRLGHINEKR+ +L +   L SFDFES+  CESCL GK
Sbjct: 515  NINAKRQHP---NDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFETCESCLLGK 571

Query: 352  MTNKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSE 531
            MT  P +G+  RA E+L LVHTDVCGP+S+ ARGG+ YFITFTDDFSR GYVYL++HKSE
Sbjct: 572  MTKAPFTGQSKRASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSRCGYVYLMRHKSE 631

Query: 532  AFEKFKEYKLE 564
            + EKFK+++ E
Sbjct: 632  SVEKFKKFQNE 642


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550379|gb|ABA93176.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 938

 Score =  209 bits (531), Expect = 5e-52
 Identities = 98/191 (51%), Positives = 136/191 (71%), Gaps = 3/191 (1%)
 Frame = +1

Query: 1   CYFVPSITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLD---CVQN 171
           CY + ++ +N+IS   L  +G+ F   +  CS   N+I Y +A ++NGLY+++   C   
Sbjct: 248 CYCILALCKNVISASCLQAEGYGFRSVDNGCSVYYNDIFYFHAPMMNGLYIVNLDGCSVY 307

Query: 172 NFNISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGK 351
           N N   +RP   N  N T++WHCRLGHINE+R+ +L +   L SFDFES+  CESCL GK
Sbjct: 308 NINAKRQRP---NDLNPTFIWHCRLGHINERRMEKLHRDGLLHSFDFESFETCESCLLGK 364

Query: 352 MTNKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSE 531
           MT  P +G+  +A E+L LVHTDVCGP+S+ ARGG+ YFITFT+DFSR+GYVYL++HKS+
Sbjct: 365 MTKAPFTGQSEKASELLGLVHTDVCGPMSSTARGGFGYFITFTNDFSRYGYVYLMRHKSD 424

Query: 532 AFEKFKEYKLE 564
           +FEKFKE++ E
Sbjct: 425 SFEKFKEFQNE 435


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  207 bits (528), Expect = 1e-51
 Identities = 97/188 (51%), Positives = 137/188 (72%), Gaps = 1/188 (0%)
 Frame = +1

Query: 4   YFVPSITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLDCVQNN-FN 180
           Y +P++ +N+IS   L  +G+ F   +  CS   N+I Y +A +++GLY+++    + +N
Sbjct: 340 YCIPALCKNVISASCLQAEGYGFRSVDNDCSVYYNDIFYFHAPMMSGLYIVNLNGYSVYN 399

Query: 181 ISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGKMTN 360
           I+ KR +  ++N  T++WHCRLGHINEKR+ ++ +   L SFDFES+  CESCL GKMT 
Sbjct: 400 INAKRQRPNDLNP-TFIWHCRLGHINEKRMEKIHRDGLLHSFDFESFETCESCLLGKMTK 458

Query: 361 KPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSEAFE 540
            P +G+  RA E+L LVHTDVCGP+S+ ARGG+ YF TFTDDFSR+GYVYL++HKSE+FE
Sbjct: 459 APFTGQSERASELLALVHTDVCGPMSSTARGGFGYFFTFTDDFSRYGYVYLMRHKSESFE 518

Query: 541 KFKEYKLE 564
           KFKE+  E
Sbjct: 519 KFKEFHNE 526


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  207 bits (526), Expect = 2e-51
 Identities = 99/186 (53%), Positives = 132/186 (70%), Gaps = 3/186 (1%)
 Frame = +1

Query: 16  SITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLD---CVQNNFNIS 186
           ++ +N+IS   L  +G+ F   +  CS   N+I Y +A ++NGLY+++   C   N N  
Sbjct: 363 ALCKNVISASCLQAEGYGFRSVDNGCSVYYNDIFYFHAPMMNGLYIVNLDGCSVYNINAK 422

Query: 187 NKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGKMTNKP 366
            +RP   N  N T++WHCRLGHINEKR+ +L +   L SFDFES+  CESCL GKMT  P
Sbjct: 423 RQRP---NDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFETCESCLLGKMTKAP 479

Query: 367 LSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSEAFEKF 546
            +G+  RA E+L LVHTDVCGP+S+ AR G+ YFITFTDDFSR+GYVYL++HKSE+FEKF
Sbjct: 480 FTGQSERASELLALVHTDVCGPMSSTARSGFGYFITFTDDFSRYGYVYLMRHKSESFEKF 539

Query: 547 KEYKLE 564
           KE++ E
Sbjct: 540 KEFQNE 545


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1142

 Score =  205 bits (521), Expect = 8e-51
 Identities = 98/191 (51%), Positives = 133/191 (69%), Gaps = 3/191 (1%)
 Frame = +1

Query: 1   CYFVPSITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLD---CVQN 171
           CY + ++ +N+IS   L  +G+ F   +  CS   N+I Y +  ++NGLY+++   C   
Sbjct: 415 CYCIRALCKNVISASCLQAEGYGFRSVDNGCSVYYNDIFYFHVPMMNGLYIVNLDGCSVY 474

Query: 172 NFNISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGK 351
           N N   + P   N  N T++WHCRLGHINEKR+ +L +   L SFDFES+   ESCL GK
Sbjct: 475 NINAKRQCP---NYLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFKTYESCLLGK 531

Query: 352 MTNKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSE 531
           MT  P +G+  RA E+L LVHTDVCGP+S+ ARGG+ YFITFTDDFS++GYVYL++HKSE
Sbjct: 532 MTKGPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSKYGYVYLMRHKSE 591

Query: 532 AFEKFKEYKLE 564
           +FEKFKE++ E
Sbjct: 592 SFEKFKEFQNE 602


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  205 bits (521), Expect = 8e-51
 Identities = 98/191 (51%), Positives = 133/191 (69%), Gaps = 3/191 (1%)
 Frame = +1

Query: 1   CYFVPSITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLD---CVQN 171
           CY + ++ +N+IS   L  +G+ F   +  CS   N+I Y +  ++NGLY+++   C   
Sbjct: 342 CYCIRALCKNVISASCLQAEGYGFRSVDNGCSVYYNDIFYFHVPMMNGLYIVNLDGCSVY 401

Query: 172 NFNISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGK 351
           N N   + P   N  N T++WHCRLGHINEKR+ +L +   L SFDFES+   ESCL GK
Sbjct: 402 NINAKRQCP---NYLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFKTYESCLLGK 458

Query: 352 MTNKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSE 531
           MT  P +G+  RA E+L LVHTDVCGP+S+ ARGG+ YFITFTDDFS++GYVYL++HKSE
Sbjct: 459 MTKGPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSKYGYVYLMRHKSE 518

Query: 532 AFEKFKEYKLE 564
           +FEKFKE++ E
Sbjct: 519 SFEKFKEFQNE 529


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score =  204 bits (520), Expect = 1e-50
 Identities = 99/186 (53%), Positives = 131/186 (70%), Gaps = 3/186 (1%)
 Frame = +1

Query: 16  SITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLD---CVQNNFNIS 186
           S+  N+IS   L  +G+ F   +  CS   N+I Y +A ++NGLY+++   C   N N  
Sbjct: 333 SLCNNVISTSCLQAEGYGFRSVDNGCSVYYNDIFYFHAPMMNGLYIVNLDGCSVYNINAK 392

Query: 187 NKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGKMTNKP 366
            +RP   N  N T++WHC LGHINEKRI +L +   L SFDFES+  CESCL GKMT  P
Sbjct: 393 RQRP---NNLNPTFIWHCCLGHINEKRIEKLHRDGLLHSFDFESFKTCESCLLGKMTKAP 449

Query: 367 LSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSEAFEKF 546
            +G+  RA E+L LVHTDVCGP+S+ ARGG+ YFITFTD+FSR+GYVYL++HKSE+FEKF
Sbjct: 450 FTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDEFSRYGYVYLMRHKSESFEKF 509

Query: 547 KEYKLE 564
           +E++ E
Sbjct: 510 QEFQNE 515


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score =  196 bits (499), Expect = 3e-48
 Identities = 95/186 (51%), Positives = 129/186 (69%), Gaps = 3/186 (1%)
 Frame = +1

Query: 16   SITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLD---CVQNNFNIS 186
            ++ +N+IS   L  +G+ F   +  CS   N+I Y +A +++GLY+++   C   N N  
Sbjct: 844  ALCKNVISASCLQAEGYGFRSVDNGCSVYYNDIFYFHAPMMSGLYIVNLDGCSIYNINAK 903

Query: 187  NKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGKMTNKP 366
             + P   N  N T++WHCRLGHINEKR+ +L +   L S DFES+  CESCL GKMT  P
Sbjct: 904  RQGP---NDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSLDFESFETCESCLLGKMTKAP 960

Query: 367  LSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSEAFEKF 546
             +G+  R  E+L LVHTDVCGP+S+ AR G+ YFITFTDDFSR+GYVYL++HKSE+FEKF
Sbjct: 961  FTGQSERTSELLVLVHTDVCGPMSSTARCGFGYFITFTDDFSRYGYVYLMRHKSESFEKF 1020

Query: 547  KEYKLE 564
            KE++ E
Sbjct: 1021 KEFQNE 1026


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  196 bits (499), Expect = 3e-48
 Identities = 94/174 (54%), Positives = 125/174 (71%), Gaps = 3/174 (1%)
 Frame = +1

Query: 52  DMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLD---CVQNNFNISNKRPKLGNMNNL 222
           + +G+ F   +  CS   N+I Y +A ++NGLY+++   C   N N   +RP   N  N 
Sbjct: 258 ETEGYGFRSVDNGCSVYYNDIFYFHAPMMNGLYIVNLDGCSVYNINAKRQRP---NNLNP 314

Query: 223 TYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGKMTNKPLSGKGIRAKEVL 402
           T++WHC LGHINEKRI +L +   L SFDFES+  CESCL GKMT  P +G+  RA E+L
Sbjct: 315 TFIWHCCLGHINEKRIEKLHRDGLLHSFDFESFKTCESCLLGKMTKAPFTGQSERASELL 374

Query: 403 ELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSEAFEKFKEYKLE 564
            LVHTDVCGP+S+ ARGG+ YFITFTD+FSR+GYVYL++HKSE+FEKF+E++ E
Sbjct: 375 GLVHTDVCGPMSSTARGGFGYFITFTDEFSRYGYVYLMRHKSESFEKFQEFQNE 428


>gb|ABA99022.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 829

 Score =  178 bits (451), Expect = 1e-42
 Identities = 83/130 (63%), Positives = 105/130 (80%)
 Frame = +1

Query: 175 FNISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGKM 354
           +NI+ KR +L N  N T++WHCRLGHINEKR+ +L +   L SFDFES+  CESCL GKM
Sbjct: 366 YNINAKR-QLPNDLNPTFIWHCRLGHINEKRMKKLHRDGLLHSFDFESFETCESCLLGKM 424

Query: 355 TNKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSEA 534
           T  P +G+  RA E+L LVHTDVCGP+S+ ARGG+ YFITFTDDFSR+GYVYL++HKSE+
Sbjct: 425 TKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSRYGYVYLMRHKSES 484

Query: 535 FEKFKEYKLE 564
           FEKFK+++ E
Sbjct: 485 FEKFKKFQNE 494


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score =  175 bits (444), Expect = 6e-42
 Identities = 95/199 (47%), Positives = 126/199 (63%), Gaps = 13/199 (6%)
 Frame = +1

Query: 7   FVPSITRNIISIPLLDMDGFHFHFG---NGSCSFGMNEIIYGNASLVNGLYLLDCVQ--- 168
           +VPSI RN+IS+  L  +G+   F    + S      E I  + SL++GLY+L       
Sbjct: 324 YVPSIRRNLISVSSLSKNGYSVCFNEFYDDSVVIKFREQIICSGSLIDGLYILKVTPELQ 383

Query: 169 ------NNFNI-SNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGA 327
                 NNF+I +  + K     + TYLWH RLGHIN  RI+ L K   L S   E+   
Sbjct: 384 LTNSEVNNFDIVAPLKRKCPIELSYTYLWHLRLGHINLDRISLLVKDGPLSSLKVEALPT 443

Query: 328 CESCLKGKMTNKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYV 507
           CESCL+GKMTN+P   KG RA +VLEL+H+D+CGP+S QARGG+ YF+TFT D+SR+GY+
Sbjct: 444 CESCLEGKMTNRPFPLKGNRANDVLELIHSDLCGPMSVQARGGFEYFVTFTYDYSRYGYI 503

Query: 508 YLIKHKSEAFEKFKEYKLE 564
           YL++ KSE FEKFK +K E
Sbjct: 504 YLLRRKSECFEKFKAFKAE 522


>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
          Length = 1303

 Score =  174 bits (440), Expect = 2e-41
 Identities = 91/191 (47%), Positives = 120/191 (62%), Gaps = 3/191 (1%)
 Frame = +1

Query: 1   CYFVPSITRNIISIPLLDMDGFHFHFGN--GSCSFGMNEIIYGNASLVNGLY-LLDCVQN 171
           C + P + RNIIS   L   GFHF F N  GS S   N I+   A   +G+Y  ++CV N
Sbjct: 336 CCYSPEMARNIISFHALFRQGFHFSFDNNIGSISVFKNGILNFTAYPCDGVYETVECVDN 395

Query: 172 NFNISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLKGK 351
             +  N       +     LWH RLGHI++KRIA+L+K   L+SFD +S   CESCL GK
Sbjct: 396 LGHSVNYIDSTSGVEKAC-LWHSRLGHISKKRIAQLQKDGVLESFDLKSDDVCESCLLGK 454

Query: 352 MTNKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHKSE 531
           MT  P  G   R + +L+++HTDVCGP  +  + G  +++TFTDDFSR+GY+YLIKHKS+
Sbjct: 455 MTKSPFKGSFERGEGLLDIIHTDVCGPFRSTTKDGTRFYVTFTDDFSRYGYIYLIKHKSD 514

Query: 532 AFEKFKEYKLE 564
            FEKFKE+K E
Sbjct: 515 TFEKFKEFKNE 525


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score =  170 bits (430), Expect = 3e-40
 Identities = 95/202 (47%), Positives = 123/202 (60%), Gaps = 16/202 (7%)
 Frame = +1

Query: 7    FVPSITRNIISIPLLDMDGFHFHFG---NGSCSFGMNEIIYGNASLVNGLYLLDCVQ--- 168
            +VPSI RN+I I  L  +G+   F    + S      E +  + SL++ LY+L       
Sbjct: 676  YVPSIRRNLIPISSLSKNGYSVCFNEFYDDSVVIKFREQMICSGSLIDSLYILKVTPELQ 735

Query: 169  ------NNFNI----SNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFES 318
                  NNF+I      KRP      + TYLWH RLGHIN  RI+ L K   L S   E+
Sbjct: 736  LTNSEVNNFDIVAPLKRKRPI---ELSYTYLWHLRLGHINLDRISLLVKDGPLSSLKVEA 792

Query: 319  YGACESCLKGKMTNKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRF 498
               CESCL+GKMT +P   KG RA +VLEL+H+D+CGP+S QARGG+ YF+TFTDD+SR+
Sbjct: 793  LPTCESCLEGKMTKRPFPLKGNRANDVLELIHSDLCGPMSVQARGGFEYFVTFTDDYSRY 852

Query: 499  GYVYLIKHKSEAFEKFKEYKLE 564
            GY+YL+  KSE FEKFK +K E
Sbjct: 853  GYIYLLCRKSECFEKFKAFKAE 874


>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
          Length = 873

 Score =  164 bits (415), Expect = 1e-38
 Identities = 77/133 (57%), Positives = 102/133 (76%)
 Frame = +1

Query: 166 QNNFNISNKRPKLGNMNNLTYLWHCRLGHINEKRIARLRKLDYLKSFDFESYGACESCLK 345
           +N +NI+ KR +  ++N  T++WHCRLGHINEKR+ +L +   L SFDFES+   E CL 
Sbjct: 213 RNFYNINAKRQRPNDLNP-TFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFETYEFCLL 271

Query: 346 GKMTNKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDFSRFGYVYLIKHK 525
           GKMT  P +G+  R+ E+L LVH DVC P+S+ ARGG+ YFITFTDDFSR+ YVYL++HK
Sbjct: 272 GKMTKAPFTGQSERSSELLGLVHIDVCEPMSSTARGGFGYFITFTDDFSRYVYVYLMRHK 331

Query: 526 SEAFEKFKEYKLE 564
           SE+FEKFKE++ E
Sbjct: 332 SESFEKFKEFQNE 344


>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  163 bits (413), Expect = 3e-38
 Identities = 91/205 (44%), Positives = 122/205 (59%), Gaps = 19/205 (9%)
 Frame = +1

Query: 7   FVPSITRNIISIPLLDMDGFHFHFGNGSCSFGMNEIIYGNASLVNGLYLLDCVQNNFNIS 186
           +VP + RN+ISI  +     H +    + SF +NE+      L  G+ +   ++ N N+ 
Sbjct: 363 YVPLMKRNLISIACILE---HIY----TISFEVNEVFI----LCKGIQICSAIREN-NLY 410

Query: 187 NKRPKLGNM-------------------NNLTYLWHCRLGHINEKRIARLRKLDYLKSFD 309
             RP   N+                   ++  YLWH RLGHIN  RI RL K   L   +
Sbjct: 411 KLRPTRANVVLNTEMFRTLETQNKKQKVSSNAYLWHLRLGHINLNRIERLVKSGILNQLE 470

Query: 310 FESYGACESCLKGKMTNKPLSGKGIRAKEVLELVHTDVCGPLSTQARGGYSYFITFTDDF 489
             S   CESCL+GKMT +  +GKG+RAK  LELVH+D+CGP++ +ARGGY YFI+F DDF
Sbjct: 471 DNSLPPCESCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDF 530

Query: 490 SRFGYVYLIKHKSEAFEKFKEYKLE 564
           SR+G+VYL+ HKSE+FEKFKEYK E
Sbjct: 531 SRYGHVYLLHHKSESFEKFKEYKAE 555