BLASTX nr result

ID: Mentha24_contig00046325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00046325
         (385 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]    87   3e-15
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]    86   7e-15
gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group]      86   7e-15
emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis ...    85   1e-14
gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japo...    84   2e-14
dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica G...    84   2e-14
emb|CAE76054.1| B1248C03.13 [Oryza sativa Japonica Group]              84   2e-14
ref|XP_003627545.1| hypothetical protein MTR_8g027350 [Medicago ...    83   4e-14
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]    83   4e-14
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]            82   6e-14
emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]    82   8e-14
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]          81   1e-13
emb|CBI31290.3| unnamed protein product [Vitis vinifera]               81   2e-13
ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255...    80   2e-13
gb|ABA94311.1| retrotransposon protein, putative, Ty1-copia subc...    80   2e-13
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...    80   3e-13
ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266...    80   3e-13
ref|XP_002449872.1| hypothetical protein SORBIDRAFT_05g024695 [S...    80   3e-13
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    80   3e-13
gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subc...    80   4e-13

>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
 Frame = +3

Query: 33  GRGSVGARGGFSRNVKSVLCQLCGKAGHVALKCFKRFDVHFTG------PSDSSVVPQGL 194
           GR   G R   S + K   CQLCGK GH A  C+ RFD+ F G      PS ++     +
Sbjct: 121 GRNGQGRRQNSSPSEKPQ-CQLCGKFGHTAQICYHRFDISFQGGXTTTSPSLNNGNQNNI 179

Query: 195 VADCGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPISCIGS 374
           +A      + S D+ WY+DSGA++H+T  L NL+ +S Y G + V +GN   L IS IGS
Sbjct: 180 LAMVASFSNSSADESWYLDSGASHHLTQNLGNLTSTSPYTGTDRVTIGNXKHLSISNIGS 239


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 48/125 (38%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
 Frame = +3

Query: 33  GRGSVGARGGFSRNVKSVL--CQLCGKAGHVALKCFKRFDVHFTGP------SDSSVVPQ 188
           GRG    +GG   +  S    CQLCGK GH A  C+ RFD+ F G       S ++    
Sbjct: 268 GRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGQTTISHSLNNGNQN 327

Query: 189 GLVADCGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPISCI 368
            + A      +   D+ WY+DSGA++H+T  L NL+ +S Y G + V +GNG  L IS I
Sbjct: 328 NIPAMVASASNNPADESWYLDSGASHHLTQNLGNLTSTSPYTGTDKVTIGNGKHLSISNI 387

Query: 369 GSSSI 383
           GS  +
Sbjct: 388 GSKQL 392


>gb|AAV44026.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 760

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 50/124 (40%), Positives = 67/124 (54%)
 Frame = +3

Query: 12  GGARSAIGRGSVGARGGFSRNVKSVLCQLCGKAGHVALKCFKRFDVHFTGPSDSSVVPQG 191
           GG R A      G RGG + N +   CQLCGK GH  +KC+KRFD  FTG   +      
Sbjct: 180 GGGRDA----PQGGRGG-ANNQEWPKCQLCGKLGHTVIKCYKRFDTSFTGEEKA------ 228

Query: 192 LVADCGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPISCIG 371
             A+     +G  D  WY+D+GAT+HIT EL  L++  +Y G E V   NG  + IS I 
Sbjct: 229 --ANTATTSYGI-DTNWYVDTGATDHITGELDKLTVRDKYTGNEQVHAANGTGMEISHID 285

Query: 372 SSSI 383
            +++
Sbjct: 286 HATV 289


>emb|CAB10380.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268350|emb|CAB78643.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 1942

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 51/119 (42%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
 Frame = +3

Query: 33  GRGSVGARGGFSRNVKSVLCQLCGKAGHVALKCFKRFDVHFTGPSDSSVVPQGLVAD--C 206
           GRG    R G SR  +   CQ+CGK GH AL C+ RFD  +       V+PQ L A    
Sbjct: 231 GRGQGNRRFGGSRGQERPTCQICGKHGHHALNCWHRFDNSY----QLDVLPQALPATQIT 286

Query: 207 GVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPISCIGSSSI 383
            + DH   +  W  DS AT HITN   +L  +  Y G + V+VGNG  LPI+  GS+SI
Sbjct: 287 DITDHSGSE--WVTDSAATAHITNSPRHLQQTKSYAGSDSVMVGNGNFLPITHTGSTSI 343


>gb|EEE57553.1| hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
          Length = 499

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
 Frame = +3

Query: 33  GRGSVG-ARGGFSRNVKS--VLCQLCGKAGHVALKCFKRFDVHFTGPSDSSVVPQGLVAD 203
           GRG  G  RGGF+ N       CQLC K GH  +KC+KRFD  FTG   S+       + 
Sbjct: 132 GRGGQGRGRGGFTNNQGGDHPKCQLCDKLGHTVVKCYKRFDASFTGEEKSAAAA---TSS 188

Query: 204 CGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPISCIGSSSI 383
            GV  +      WY+D+GAT+HIT++L  L++  +YNG + V   +G  + I+ IG S +
Sbjct: 189 YGVGTN------WYIDTGATDHITSDLDKLTVREKYNGGDQVHTASGSGMKINQIGQSIV 242


>dbj|BAG98101.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 572

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
 Frame = +3

Query: 33  GRGSVG-ARGGFSRNVKS--VLCQLCGKAGHVALKCFKRFDVHFTGPSDSSVVPQGLVAD 203
           GRG  G  RGGF+ N       CQLC K GH  +KC+KRFD  FTG   S+       + 
Sbjct: 205 GRGGQGRGRGGFTNNQGGDHPKCQLCDKLGHTVVKCYKRFDASFTGEEKSAAAA---TSS 261

Query: 204 CGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPISCIGSSSI 383
            GV  +      WY+D+GAT+HIT++L  L++  +YNG + V   +G  + I+ IG S +
Sbjct: 262 YGVGTN------WYIDTGATDHITSDLDKLTVREKYNGGDQVHTASGSGMKINQIGQSIV 315


>emb|CAE76054.1| B1248C03.13 [Oryza sativa Japonica Group]
          Length = 261

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
 Frame = +3

Query: 12  GGARSAIGRGSV-GARGGFSRNVKSVLCQLCGKAGHVALKCFKRFDVHFTGPSDSSVVPQ 188
           GG     GRG+  G+RGG + N +   CQLCGK GH  +KC+KRFD  FTG   +     
Sbjct: 161 GGGNLGSGRGTPQGSRGG-ANNQERPKCQLCGKLGHTVIKCYKRFDTSFTGEEKA----- 214

Query: 189 GLVADCGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGN 341
              A+     +G  D  WY+D+GAT+H+T EL  L++  +Y G E V   N
Sbjct: 215 ---ANAATTSYGI-DTNWYVDTGATDHVTGELDKLTVRDKYTGNEQVHAAN 261


>ref|XP_003627545.1| hypothetical protein MTR_8g027350 [Medicago truncatula]
           gi|355521567|gb|AET02021.1| hypothetical protein
           MTR_8g027350 [Medicago truncatula]
          Length = 220

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 2/126 (1%)
 Frame = +3

Query: 12  GGARSAIGRGSVGARGGFSRNVKSVLCQLCGKAGHVALKCFKRFDVHFTGP--SDSSVVP 185
           G  R +  +G  G RG    N    +CQ+C + GH A+ CF RFD  ++G   S+S    
Sbjct: 90  GNWRGSNFKGMRGGRGKGRVNNSKPVCQVCTRTGHTAISCFYRFDKSYSGTNYSNSENEK 149

Query: 186 QGLVADCGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPISC 365
           QG         + S+D  WY DSGA+NH+T++        E+ G   ++VGNG +L +  
Sbjct: 150 QGTHNAFVASPYSSQDYEWYFDSGASNHVTHQTDRFQDLVEHTGKNSLMVGNGEKLKVVA 209

Query: 366 IGSSSI 383
            GSS I
Sbjct: 210 SGSSKI 215


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 55/133 (41%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
 Frame = +3

Query: 33  GRGSVGARGGFSRNVKSVLCQLCGKAGHVALKCFKRFDVHFTGPSD-SSVVPQGLVADCG 209
           GRG  G RG +  N K   CQLCG+ GHV ++C+ RFD  FTGPS      PQG +A   
Sbjct: 269 GRGRHG-RGSWKGNNKPQ-CQLCGRIGHVVMQCYYRFDQSFTGPSQLQGNRPQGNMAHLH 326

Query: 210 VQDHGS----------------EDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGN 341
            Q                    +D  WY DSGAT+H+T  L NL   S++   + V VGN
Sbjct: 327 QQLSEXFFPGTPSVKPTTAEIIQDNNWYPDSGATHHLTPNLNNLLTKSQFPSSDEVFVGN 386

Query: 342 GYRLPISCIGSSS 380
           G  LPI  IG +S
Sbjct: 387 GKGLPIHHIGHTS 399


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
 Frame = +3

Query: 12  GGARSAIGRGSVGARG-GFSRNVKSV-------LCQLCGKAGHVALKCFKRFDVHFTGPS 167
           GG     GR     RG GFS++  +        +CQ+CG+ GH ALKC+ RFD ++    
Sbjct: 248 GGYGQNRGRSGYSTRGRGFSQHQTNSNNTGERPVCQICGRTGHTALKCYNRFDHNYQSVD 307

Query: 168 DSSVVPQGLVADCGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGY 347
            +       V+D       S  + W  DS AT H+T+   NL  +S YNG + V+VG+G 
Sbjct: 308 TAQAFSSLRVSD-------SSGKEWVPDSAATAHVTSSTNNLQAASPYNGSDTVLVGDGA 360

Query: 348 RLPISCIGSSSI 383
            LPI+ +GS++I
Sbjct: 361 YLPITHVGSTTI 372


>emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]
          Length = 1139

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 49/128 (38%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
 Frame = +3

Query: 33  GRGSVGARGGFSRNVKSVL--CQLCGKAGHVALKCFKRFDVHFTG--PSDSSVVPQG--- 191
           GRG    +GG   +  S    CQLCGK GH A  C+ RFD+ F G   + S  +  G   
Sbjct: 239 GRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFDISFQGGQTTTSHSLNNGNQN 298

Query: 192 ----LVADCGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPI 359
               +VA      +   D+ WY+DSG ++H+T  L NL+ +S Y G + V +GNG  L I
Sbjct: 299 NIPTMVASAS---NSPADESWYLDSGTSHHLTQNLGNLTSTSLYTGTDRVTIGNGKHLSI 355

Query: 360 SCIGSSSI 383
           S IGS  +
Sbjct: 356 SNIGSKQL 363


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
 Frame = +3

Query: 33  GRGSVGARG-GFSRNVKSV-------LCQLCGKAGHVALKCFKRFDVHFTGPSDSSVVPQ 188
           GRG    RG GFS++  +        +CQ+CG+ GH A+KC+ RFD ++      S VP 
Sbjct: 254 GRGGYSTRGRGFSQHQSASPSSGQRPVCQICGRIGHTAIKCYNRFDNNY-----QSEVPT 308

Query: 189 GLVADCGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPISCI 368
              +   V D   ++  WY DS AT HIT   + L  ++ Y G + V+VG+G  LPI+ +
Sbjct: 309 QAFSALRVSDETGKE--WYPDSAATAHITASTSGLQNATTYEGNDAVLVGDGTYLPITHV 366

Query: 369 GSSSI 383
           GS++I
Sbjct: 367 GSTTI 371


>emb|CBI31290.3| unnamed protein product [Vitis vinifera]
          Length = 1201

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
 Frame = +3

Query: 66  SRNVKSVLCQLCGKAGHVALKCFKRFDVHFTGP-----SDSSVVPQGLVADCGVQDHGSE 230
           SR      CQLCGK GH+ L C+ RFDV++ GP     S S + P  L          + 
Sbjct: 383 SRTNNRPQCQLCGKFGHMVLSCYHRFDVNYQGPRAPASSTSQIGPIPLAQAMMAAPSPTL 442

Query: 231 DQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPISCIGSS 377
              W++DS AT+H+++  AN+   + YNG + V+V NG  LPI+ +G S
Sbjct: 443 MDSWFLDSSATHHLSHTAANIHNGTPYNGTDSVMVDNGKSLPITQVGHS 491


>ref|XP_004248587.1| PREDICTED: uncharacterized protein LOC101255439 [Solanum
           lycopersicum]
          Length = 318

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 42/99 (42%), Positives = 61/99 (61%)
 Frame = +3

Query: 87  LCQLCGKAGHVALKCFKRFDVHFTGPSDSSVVPQGLVADCGVQDHGSEDQIWYMDSGATN 266
           LCQ+C K  H+A  C+ R++  +  P  ++  PQ  VA          D  W +DSGATN
Sbjct: 213 LCQICEKLDHLAKNCYNRYNDQY--PPTNTPRPQANVA---TSSSAFLDPSWCLDSGATN 267

Query: 267 HITNELANLSISSEYNGPEGVVVGNGYRLPISCIGSSSI 383
           H+T ++ NLSI+S+Y+G + + VGNG +L I+  GSSSI
Sbjct: 268 HVTADVGNLSIASDYSGNDSLAVGNGSQLHITHFGSSSI 306


>gb|ABA94311.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 339

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 47/113 (41%), Positives = 58/113 (51%)
 Frame = +3

Query: 6   FYGGARSAIGRGSVGARGGFSRNVKSVLCQLCGKAGHVALKCFKRFDVHFTGPSDSSVVP 185
           F G      GRG+ G RGG  +  + V CQLCGK GH  +KC+ RFD  +         P
Sbjct: 223 FRGRGNGGCGRGN-GGRGGGQQGPRPV-CQLCGKTGHTVIKCWYRFDQTYQ--------P 272

Query: 186 QGLVADCGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNG 344
           +  VA          D  WY+D GAT+HIT EL  LSI  +YNG + V   NG
Sbjct: 273 EEKVAAAATNSAYGVDTNWYVDCGATDHITGELDKLSIREKYNGLDQVHATNG 325


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
 Frame = +3

Query: 48  GARGGFSRNVKS-----VLCQLCGKAGHVALKCFKRFDVHFTGP-------SDSSVVPQG 191
           G RGG S   ++       CQ+C K GHVA +C+ RFD  F          S S+  PQ 
Sbjct: 295 GFRGGHSNKGRANPGSRPQCQICCKIGHVATECWHRFDNQFQPKASHSNQFSSSAQDPQA 354

Query: 192 LVADCGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPISCIG 371
           L+A  G+      +  W++D+GAT+H+T++LANLS+ + ++G + V+VGNG  L +   G
Sbjct: 355 LMAAPGLLG----ETPWFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTG 410

Query: 372 SSSI 383
            SSI
Sbjct: 411 HSSI 414


>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
           lycopersicum]
          Length = 544

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
 Frame = +3

Query: 66  SRNVKSVLCQLCGKAGHVALKCFKRFDVHFTGPSDSSVVPQGLVADCGVQDHGSE----D 233
           +R+   ++CQ+C K  H A  C+ R ++    P+ SS  PQ  +         S     D
Sbjct: 281 NRSSPRIICQICEKPNHHARNCYNRNNMDTYPPTRSSNRPQANMVTPSTNSMMSPSAIID 340

Query: 234 QIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPISCIGSSSI 383
             W+ DSGATNH+T++L+ LSI  +YNG + + +GNG +L I+ IGSS +
Sbjct: 341 NSWFADSGATNHVTSDLSQLSIHMDYNGEDQLALGNGQKLSINHIGSSKL 390


>ref|XP_002449872.1| hypothetical protein SORBIDRAFT_05g024695 [Sorghum bicolor]
           gi|241935715|gb|EES08860.1| hypothetical protein
           SORBIDRAFT_05g024695 [Sorghum bicolor]
          Length = 438

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 44/106 (41%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
 Frame = +3

Query: 36  RGSVGARGGFSRNVK---SVLCQLCGKAGHVALKCFKRFDVHFTGPSDSSVVPQGLVADC 206
           RGS G RGG  R V     + CQ+C K GH A  CFKR D  +T P  S        A  
Sbjct: 268 RGS-GGRGGGGRRVPFQPGMFCQICTKEGHSAFDCFKRHDASYTPPQKS--------ASA 318

Query: 207 GVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNG 344
               H   D  WYMD+G T+HIT+EL  L++  +Y+G + V   NG
Sbjct: 319 ATSSHYGVDSNWYMDTGVTDHITSELDKLTVRDKYHGGDQVHTANG 364


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
 Frame = +3

Query: 33  GRGSVGARGGFSRNVKSVL--------CQLCGKAGHVALKCFKRFDVHFTGPSDSSVVPQ 188
           GRGS       SRN  +V         CQ+CGK GH+A+ C+ RFD  +    ++ +   
Sbjct: 229 GRGSFNNHSYSSRNFNNVSGGSNGKPQCQVCGKYGHIAINCYHRFDQTYQPTMNNHLA-- 286

Query: 189 GLVADCGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPISCI 368
            +VA          D+ WYMD+GAT+H+T  L  L+  + + G + V+VGNG RL IS I
Sbjct: 287 AMVATPSTVG----DESWYMDTGATHHLTPNLNKLNSHTPFAGSDKVMVGNGNRLNISNI 342

Query: 369 GSSSI 383
           G S+I
Sbjct: 343 GHSTI 347


>gb|ABA95720.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 358

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
 Frame = +3

Query: 9   YGGARSAI-GRGSVGARGGFSRNVK-SVLCQLCGKAGHVALKCFKRFDVHFTGPSDSSVV 182
           +GG  S   GRG  G  GG   + K   +CQLCGK GH  +KC+KRFD  ++G   S   
Sbjct: 194 HGGPNSGNRGRGGFGRGGGGRGDGKLKPICQLCGKIGHTVVKCWKRFDTSYSGEEKSVAA 253

Query: 183 PQGLVADCGVQDHGSEDQIWYMDSGATNHITNELANLSISSEYNGPEGVVVGNGYRLPIS 362
                   GV      D  WY+D+GAT+HIT EL  L++  +Y G + V   +G  + I 
Sbjct: 254 ATN---SYGV------DTNWYIDTGATDHITGELEKLTVRDKYTGGDQVHTASGTGMGID 304

Query: 363 CIGSSSI 383
            +G + I
Sbjct: 305 HVGRTVI 311


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