BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00046139
         (313 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II tra...    62   2e-11
ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II tra...    62   8e-08
gb|EYU29950.1| hypothetical protein MIMGU_mgv1a001668mg [Mimulus...    60   3e-07
gb|EYU29949.1| hypothetical protein MIMGU_mgv1a001668mg [Mimulus...    60   3e-07
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr...    51   6e-06
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra...    51   6e-06

>ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Solanum tuberosum]
          Length = 819

 Score = 62.0 bits (149), Expect(2) = 2e-11
 Identities = 34/46 (73%), Positives = 36/46 (78%)
 Frame = +3

Query: 3   RPVGGAAANVRILNDVAVAQARQALAGGTSIGLPSMGPTPMLSNMI 140
           RPV  AAANV+ILN   VAQA Q L GGTSIGL SMG TPMLS+MI
Sbjct: 354 RPVAAAAANVKILN--GVAQAHQVLGGGTSIGLQSMGGTPMLSSMI 397



 Score = 32.3 bits (72), Expect(2) = 2e-11
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +1

Query: 163 PPPQTVLXXXXXXXXXXXXXLPIPATGTIAPNSGPAPFTSTASTMPGNSS 312
           P  Q VL             +P+  +     NS P+ FTSTA +M GNS+
Sbjct: 406 PASQAVLSSGQSGVTTMTGAVPLAGSAQNTQNSAPSSFTSTAPSMSGNSN 455


>ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like [Solanum lycopersicum]
          Length = 805

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/46 (73%), Positives = 36/46 (78%)
 Frame = +3

Query: 3   RPVGGAAANVRILNDVAVAQARQALAGGTSIGLPSMGPTPMLSNMI 140
           RPV  AAANV+ILN   VAQA Q L GGTSIGL SMG TPMLS+MI
Sbjct: 354 RPVAAAAANVKILN--GVAQAHQVLGGGTSIGLQSMGGTPMLSSMI 397


>gb|EYU29950.1| hypothetical protein MIMGU_mgv1a001668mg [Mimulus guttatus]
          Length = 757

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/54 (70%), Positives = 40/54 (74%), Gaps = 8/54 (14%)
 Frame = +3

Query: 3   RPVGGAAANVRILNDVAVAQARQALA-------GGTSIGLPSM-GPTPMLSNMI 140
           RP GGAAANVRILND  +AQARQALA       GG SIG+PSM G T MLSNMI
Sbjct: 357 RPAGGAAANVRILND--MAQARQALAAAAAGGGGGASIGIPSMGGGTTMLSNMI 408


>gb|EYU29949.1| hypothetical protein MIMGU_mgv1a001668mg [Mimulus guttatus]
          Length = 777

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/54 (70%), Positives = 40/54 (74%), Gaps = 8/54 (14%)
 Frame = +3

Query: 3   RPVGGAAANVRILNDVAVAQARQALA-------GGTSIGLPSM-GPTPMLSNMI 140
           RP GGAAANVRILND  +AQARQALA       GG SIG+PSM G T MLSNMI
Sbjct: 357 RPAGGAAANVRILND--MAQARQALAAAAAGGGGGASIGIPSMGGGTTMLSNMI 408


>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
           gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 25-like isoform
           X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
           hypothetical protein CICLE_v10030710mg [Citrus
           clementina]
          Length = 830

 Score = 50.8 bits (120), Expect(2) = 6e-06
 Identities = 33/54 (61%), Positives = 38/54 (70%), Gaps = 8/54 (14%)
 Frame = +3

Query: 3   RPVGGAAANVRILNDVAVAQARQ-----ALAGGTSIGLPSMGPTPM---LSNMI 140
           RP+  AAANV ILN+++  QARQ     AL GGTSIGL SMG TPM   +SNMI
Sbjct: 356 RPMAPAAANVNILNNLS--QARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMI 407



 Score = 24.6 bits (52), Expect(2) = 6e-06
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 229 IPATGTIAPNSGPAPFTSTASTMPGNSS 312
           +  T  +  NSG   FTS  S + GNS+
Sbjct: 438 LTGTSQVPQNSGLNSFTSAPSNLSGNSN 465


>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           25-like isoform X2 [Citrus sinensis]
          Length = 829

 Score = 50.8 bits (120), Expect(2) = 6e-06
 Identities = 33/54 (61%), Positives = 38/54 (70%), Gaps = 8/54 (14%)
 Frame = +3

Query: 3   RPVGGAAANVRILNDVAVAQARQ-----ALAGGTSIGLPSMGPTPM---LSNMI 140
           RP+  AAANV ILN+++  QARQ     AL GGTSIGL SMG TPM   +SNMI
Sbjct: 355 RPMAPAAANVNILNNLS--QARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMI 406



 Score = 24.6 bits (52), Expect(2) = 6e-06
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 229 IPATGTIAPNSGPAPFTSTASTMPGNSS 312
           +  T  +  NSG   FTS  S + GNS+
Sbjct: 437 LTGTSQVPQNSGLNSFTSAPSNLSGNSN 464