BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00046134
         (910 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus...   278   2e-72
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise...   249   8e-64
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...   232   2e-58
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   231   2e-58
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...   231   2e-58
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   231   2e-58
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...   230   5e-58
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   228   3e-57
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   227   6e-57
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   216   8e-54
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   209   9e-52
ref|XP_006411250.1| hypothetical protein EUTSA_v10016128mg [Eutr...   209   2e-51
ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Caps...   208   3e-51
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...   207   6e-51
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi...   204   3e-50
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub...   203   7e-50
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   201   4e-49
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no...   198   3e-48
ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phas...   198   3e-48
gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis th...   197   5e-48

>gb|EYU38281.1| hypothetical protein MIMGU_mgv1a000048mg [Mimulus guttatus]
          Length = 2113

 Score =  278 bits (711), Expect = 2e-72
 Identities = 137/193 (70%), Positives = 154/193 (79%)
 Frame = +1

Query: 331 TFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEAGQC 510
           TFEA+I+GIKF LAT QEI KASISDCPISHASQLSNPFLGLPLETGKCESCGTGE GQC
Sbjct: 9   TFEAKIEGIKFGLATRQEICKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEPGQC 68

Query: 511 EGHFGYIELPTPIYHPDHVNEXXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCCEETSH 690
           EGHFGYIELPTPIYHPDHV+E                     NVG+ E++LS+CCEETS 
Sbjct: 69  EGHFGYIELPTPIYHPDHVDELKRMLTLLCLKCLKFKNRKVKNVGVIERVLSTCCEETSQ 128

Query: 691 ISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLASEVVAILK 870
           +SIN+AKTTDGAY+LELK+P++     GLW FLEKYGFRYGD   YSR LL SEV+AIL+
Sbjct: 129 MSINQAKTTDGAYFLELKVPTRLRHEDGLWHFLEKYGFRYGDG--YSRPLLPSEVMAILR 186

Query: 871 KISQDTRKKLSSK 909
           K+ QDTRKKLS+K
Sbjct: 187 KLPQDTRKKLSAK 199


>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score =  249 bits (637), Expect = 8e-64
 Identities = 126/203 (62%), Positives = 145/203 (71%)
 Frame = +1

Query: 301 MEGPSVPAATTFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCE 480
           ME  SV  AT  E  I GI F LAT QEI K+SISDCPI+HASQLSNPFLGLPL++GKCE
Sbjct: 1   MENSSV--ATVPEGMISGISFGLATFQEICKSSISDCPITHASQLSNPFLGLPLDSGKCE 58

Query: 481 SCGTGEAGQCEGHFGYIELPTPIYHPDHVNEXXXXXXXXXXXXXXXXXXXXXNVGLAEKM 660
           SCGTGE GQCEGHFGYIE PTPIYHPDH+ E                     N+G  E+M
Sbjct: 59  SCGTGEPGQCEGHFGYIEFPTPIYHPDHITELKKMLSLLCLKCLKLKTRKVKNIGAMERM 118

Query: 661 LSSCCEETSHISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSL 840
           L SCCEETS I++ E KT+DGA YLELK+P KS  R G W FLEK+GFRYG T  YSR L
Sbjct: 119 LMSCCEETSQITVYETKTSDGASYLELKVPPKSKLREGYWNFLEKHGFRYGHT--YSRPL 176

Query: 841 LASEVVAILKKISQDTRKKLSSK 909
           L SEV++ILKK+ ++T+K L S+
Sbjct: 177 LPSEVMSILKKLPKETKKSLLSR 199


>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 991

 Score =  232 bits (591), Expect = 2e-58
 Identities = 117/203 (57%), Positives = 141/203 (69%)
 Frame = +1

Query: 301 MEGPSVPAATTFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCE 480
           ME      ++  E E+ GIKF LAT +EIS AS+SDCPISH+SQL+NPFLGLPLE GKCE
Sbjct: 1   MEDKENTQSSFLEGEVVGIKFGLATYKEISAASVSDCPISHSSQLTNPFLGLPLEFGKCE 60

Query: 481 SCGTGEAGQCEGHFGYIELPTPIYHPDHVNEXXXXXXXXXXXXXXXXXXXXXNVGLAEKM 660
           SCGT E G+CEGHFGYIELP PIYHP HV+E                     + G+AE+ 
Sbjct: 61  SCGTSEPGKCEGHFGYIELPIPIYHPSHVSELKRMLSLLCLKCLKLKTNKIKSSGVAER- 119

Query: 661 LSSCCEETSHISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSL 840
           L SCCEE + ISI E KTTDGAY L+LK+PS+   R G W FLE+YGFRYGD    +R+L
Sbjct: 120 LFSCCEEAAQISIKEVKTTDGAYILQLKLPSRMRLRDGFWNFLERYGFRYGDD--ITRTL 177

Query: 841 LASEVVAILKKISQDTRKKLSSK 909
           L  EV+ +L++I QDTRKKL+ K
Sbjct: 178 LPCEVLEMLRRIPQDTRKKLAKK 200


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
           sinensis]
          Length = 1865

 Score =  231 bits (590), Expect = 2e-58
 Identities = 116/198 (58%), Positives = 142/198 (71%), Gaps = 2/198 (1%)
 Frame = +1

Query: 322 AATTFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEA 501
           ++T  E +I GI+F LAT +EI  ASISDC ISHASQL+NPFLGLPLE GKCESCGT E 
Sbjct: 6   SSTILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCESCGTSEP 65

Query: 502 GQCEGHFGYIELPTPIYHPDHVNE--XXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCC 675
           G+CEGHFGYIELP PIYHP H++E                       N G+A+++LSSCC
Sbjct: 66  GKCEGHFGYIELPIPIYHPSHISELKHMLSLLCLKCLKMKSTKFQIKNDGVAQRLLSSCC 125

Query: 676 EETSHISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLASEV 855
           EE S +SI + KTTDGA+YLELK+PSK     G W FLE+YGFRYGD+   +R+LLASEV
Sbjct: 126 EEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDS--LTRTLLASEV 183

Query: 856 VAILKKISQDTRKKLSSK 909
             +LK+I ++TRKKL+ K
Sbjct: 184 KEMLKRIPEETRKKLAGK 201


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
           gi|557522591|gb|ESR33958.1| hypothetical protein
           CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score =  231 bits (590), Expect = 2e-58
 Identities = 116/198 (58%), Positives = 142/198 (71%), Gaps = 2/198 (1%)
 Frame = +1

Query: 322 AATTFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEA 501
           ++T  E +I GI+F LAT +EI  ASISDC ISHASQL+NPFLGLPLE GKCESCGT E 
Sbjct: 6   SSTILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCESCGTSEP 65

Query: 502 GQCEGHFGYIELPTPIYHPDHVNE--XXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCC 675
           G+CEGHFGYIELP PIYHP H++E                       N G+A+++LSSCC
Sbjct: 66  GKCEGHFGYIELPIPIYHPSHISELKRMLSLLCLKCLKMKSTKLQIKNDGVAQRLLSSCC 125

Query: 676 EETSHISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLASEV 855
           EE S +SI + KTTDGA+YLELK+PSK     G W FLE+YGFRYGD+   +R+LLASEV
Sbjct: 126 EEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDS--LTRTLLASEV 183

Query: 856 VAILKKISQDTRKKLSSK 909
             +LK+I ++TRKKL+ K
Sbjct: 184 KEMLKRIPEETRKKLAGK 201


>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
           subunit 1 [Solanum lycopersicum]
          Length = 1632

 Score =  231 bits (590), Expect = 2e-58
 Identities = 116/188 (61%), Positives = 136/188 (72%)
 Frame = +1

Query: 346 IKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFG 525
           +K IKF LAT QEI K+SISDCPI+H S L NPFLGLPLE G+CESCGT E GQCEGHFG
Sbjct: 15  VKRIKFGLATPQEICKSSISDCPITHPSLLLNPFLGLPLEAGRCESCGTAEPGQCEGHFG 74

Query: 526 YIELPTPIYHPDHVNEXXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCCEETSHISINE 705
           YIELP PIYHPDHV+E                     N G+ E+MLSSCCE+ S +S+ E
Sbjct: 75  YIELPIPIYHPDHVSELKKMLSLLCLKCLKMKNRKVKNAGVLERMLSSCCEDVSQVSVYE 134

Query: 706 AKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLASEVVAILKKISQD 885
            KT+DGA YLELK+P K+  +   W FLEKYG+RYGD   YSR LL SEV+AIL++I +D
Sbjct: 135 GKTSDGASYLELKVP-KNAAKLQEWNFLEKYGYRYGDG--YSRPLLPSEVLAILRRIRED 191

Query: 886 TRKKLSSK 909
           TRKKLS+K
Sbjct: 192 TRKKLSAK 199


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
           gi|462415343|gb|EMJ20080.1| hypothetical protein
           PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  230 bits (587), Expect = 5e-58
 Identities = 119/198 (60%), Positives = 140/198 (70%), Gaps = 2/198 (1%)
 Frame = +1

Query: 322 AATTFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEA 501
           ++T  E EI GIKF LAT QEI  ASIS+C ISHASQLSNPFLGLPLE GKCESCGT EA
Sbjct: 6   SSTILEGEITGIKFGLATHQEICTASISNCAISHASQLSNPFLGLPLEFGKCESCGTSEA 65

Query: 502 GQCEGHFGYIELPTPIYHPDHVNE--XXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCC 675
           G+CEGHFGYIELP PI+HP+HV+E                       N GLAE+MLSSCC
Sbjct: 66  GKCEGHFGYIELPIPIFHPNHVSELKRMLSLLCLKCLKMKKNKFPTKNAGLAERMLSSCC 125

Query: 676 EETSHISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLASEV 855
           E+ S +SI E K TDG+  L+LK PSKS    G W FLE+YGFRYGD   + R+LL  EV
Sbjct: 126 EDASQVSIGEIKPTDGSCSLQLKRPSKSRTPPGFWNFLERYGFRYGDG--HIRTLLPCEV 183

Query: 856 VAILKKISQDTRKKLSSK 909
           + +LK+I Q+TRKKL++K
Sbjct: 184 MEMLKRIPQETRKKLAAK 201


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  228 bits (580), Expect = 3e-57
 Identities = 110/196 (56%), Positives = 137/196 (69%)
 Frame = +1

Query: 322 AATTFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEA 501
           ++T  + EI GI+F LAT QEI  AS+SDCPISHASQL+NPFLGLPLE GKCESCGT E 
Sbjct: 5   SSTILDGEISGIRFGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCESCGTAEP 64

Query: 502 GQCEGHFGYIELPTPIYHPDHVNEXXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCCEE 681
           GQCEGHFGYIELP PIYHP HV+E                     N G+ E++L+ CC++
Sbjct: 65  GQCEGHFGYIELPIPIYHPGHVSELKRMLSLLCLKCLKIRKSKVTNNGITEQLLAPCCQD 124

Query: 682 TSHISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLASEVVA 861
           +  +S+ E + T+GA +LELKIPS+S P+ G W FL +YG+RYG     SR LL SEV+ 
Sbjct: 125 SPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHN--LSRILLPSEVME 182

Query: 862 ILKKISQDTRKKLSSK 909
           IL++I +DTRKKL  K
Sbjct: 183 ILRRIPEDTRKKLVRK 198


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
           sativus]
          Length = 1959

 Score =  227 bits (578), Expect = 6e-57
 Identities = 112/202 (55%), Positives = 143/202 (70%)
 Frame = +1

Query: 304 EGPSVPAATTFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCES 483
           E PS   ++  +AEI GI+F+LA  QEI  A+ISDCPI+HASQLSNPFLGLP+E GKCES
Sbjct: 3   EAPS--CSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCES 60

Query: 484 CGTGEAGQCEGHFGYIELPTPIYHPDHVNEXXXXXXXXXXXXXXXXXXXXXNVGLAEKML 663
           CGT E G+CEGHFGYIELP PIYHP+H+ E                     N+G AE++L
Sbjct: 61  CGTSEPGKCEGHFGYIELPIPIYHPNHITE--LKKMLSLLCLKCLKMKKTKNIGFAERLL 118

Query: 664 SSCCEETSHISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLL 843
           SSCCE+ S ++I EAK  DGA YL+LK+PS+++ +   W FLE+YGFRYGD   ++R+LL
Sbjct: 119 SSCCEDASQVTIREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDN--FTRTLL 176

Query: 844 ASEVVAILKKISQDTRKKLSSK 909
             EV  +LKKI  +TRKKL+ +
Sbjct: 177 PCEVKEMLKKIPNETRKKLAGR 198


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
           gi|550343552|gb|EEE78905.2| hypothetical protein
           POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  216 bits (551), Expect = 8e-54
 Identities = 113/201 (56%), Positives = 138/201 (68%), Gaps = 6/201 (2%)
 Frame = +1

Query: 325 ATTFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEAG 504
           ++ F+ EI GI+F LAT +EI  ASISDCPISH+SQL+NPFLGLPLE GKCESCGT E G
Sbjct: 7   SSIFDGEITGIRFGLATQKEICTASISDCPISHSSQLTNPFLGLPLEFGKCESCGTSEPG 66

Query: 505 QCEGHFGYIELPTPIYHPDHVNE--XXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCCE 678
           +CEGHFG+I LP PIYHP H++E                       + G+AE++L SCCE
Sbjct: 67  KCEGHFGFIHLPIPIYHPSHISELKRMLSLICLKCLKLKRNKIQIKSNGVAERLL-SCCE 125

Query: 679 ----ETSHISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLA 846
               E + ISI E K TDGA +LELK+PS+S  R G W FLE+YGFRYGD   ++R LL 
Sbjct: 126 VSIKECAQISIREVKNTDGACFLELKLPSRSRLRDGCWNFLERYGFRYGDD--FTRPLLP 183

Query: 847 SEVVAILKKISQDTRKKLSSK 909
            EV+ ILK+I  +TRKKLS K
Sbjct: 184 CEVMQILKRIPAETRKKLSGK 204


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
           subunit 1-like [Cucumis sativus]
          Length = 2019

 Score =  209 bits (533), Expect = 9e-52
 Identities = 111/230 (48%), Positives = 143/230 (62%), Gaps = 28/230 (12%)
 Frame = +1

Query: 304 EGPSVPAATTFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCES 483
           E PS   ++  +AEI GI+F+LA  QEI  A+ISDCPI+HASQLSNPFLGLP+E GKCES
Sbjct: 3   EAPS--CSSILDAEIVGIRFSLANGQEICIAAISDCPITHASQLSNPFLGLPIEFGKCES 60

Query: 484 CGTGEAGQCE--------------------------GHFGYIELPTPIYHPDHVNE--XX 579
           CGT E G+CE                          GHFGYIELP PIYHP+H+ E    
Sbjct: 61  CGTSEPGKCEGIDFFFXIFNVLHNTTXQVVFIFHLSGHFGYIELPIPIYHPNHITELKKM 120

Query: 580 XXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCCEETSHISINEAKTTDGAYYLELKIPSKS 759
                              N+G AE++LSSCCE+ S ++I EAK  DGA YL+LK+PS++
Sbjct: 121 LSLLCLKCLKMKKTKFPSKNIGFAERLLSSCCEDASQVTIREAKKADGASYLQLKVPSRT 180

Query: 760 NPRHGLWKFLEKYGFRYGDTSMYSRSLLASEVVAILKKISQDTRKKLSSK 909
           + +   W FLE+YGFRYGD   ++R+LL+  V  +LKKI  +TRKKL+ +
Sbjct: 181 SLQERFWDFLERYGFRYGDN--FTRTLLSVMVKEMLKKIPNETRKKLAGR 228


>ref|XP_006411250.1| hypothetical protein EUTSA_v10016128mg [Eutrema salsugineum]
           gi|557112419|gb|ESQ52703.1| hypothetical protein
           EUTSA_v10016128mg [Eutrema salsugineum]
          Length = 1874

 Score =  209 bits (531), Expect = 2e-51
 Identities = 108/191 (56%), Positives = 132/191 (69%)
 Frame = +1

Query: 337 EAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEAGQCEG 516
           E EI GI+FALAT  EI  ASISD  I+H+SQLSN FLGLPLE G+CESCG  E  +CEG
Sbjct: 11  EGEIVGIRFALATPHEICTASISDSAINHSSQLSNSFLGLPLEFGRCESCGATEPDKCEG 70

Query: 517 HFGYIELPTPIYHPDHVNEXXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCCEETSHIS 696
           HFGYIELP PIYHP HV+E                     + GLAE++L  CCEE S+IS
Sbjct: 71  HFGYIELPVPIYHPAHVSELKQMLSLLCLKCLNIKKAKSTSGGLAERLLGVCCEEASNIS 130

Query: 697 INEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLASEVVAILKKI 876
           I E K +DGA YLELK PS+S  + G W FLE+YG+RYG  S Y+R LLA EV  I++++
Sbjct: 131 IRE-KASDGASYLELKFPSRSRLQEGCWNFLERYGYRYG--SDYTRPLLAREVKEIIRRM 187

Query: 877 SQDTRKKLSSK 909
            ++TRKKL++K
Sbjct: 188 PEETRKKLTAK 198


>ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Capsella rubella]
           gi|482562261|gb|EOA26451.1| hypothetical protein
           CARUB_v10022497mg [Capsella rubella]
          Length = 1959

 Score =  208 bits (529), Expect = 3e-51
 Identities = 109/191 (57%), Positives = 131/191 (68%)
 Frame = +1

Query: 337 EAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEAGQCEG 516
           E EI GI FALA+  EI  ASIS+  I+HASQLSNPFLGLPLE GKCESCG  E  +CEG
Sbjct: 11  EGEIVGITFALASHHEICIASISESSINHASQLSNPFLGLPLEFGKCESCGATEPDKCEG 70

Query: 517 HFGYIELPTPIYHPDHVNEXXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCCEETSHIS 696
           HFGYI+LP PIYHP HV E                     + GLAE++L  CCEE SHIS
Sbjct: 71  HFGYIQLPVPIYHPAHVIELKQMLSLLCLKCLKIKKAKSTSGGLAERLLGVCCEEASHIS 130

Query: 697 INEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLASEVVAILKKI 876
           I + + +DGA YLELK PS+S  + G W FLE+YG+RYG  S Y+R LLA EV  IL++I
Sbjct: 131 IRD-RASDGASYLELKFPSRSRLQAGCWNFLERYGYRYG--SDYTRPLLAREVKEILRRI 187

Query: 877 SQDTRKKLSSK 909
            ++TRKKL++K
Sbjct: 188 PEETRKKLAAK 198


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
           vesca subsp. vesca]
          Length = 1991

 Score =  207 bits (526), Expect = 6e-51
 Identities = 103/191 (53%), Positives = 129/191 (67%)
 Frame = +1

Query: 337 EAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEAGQCEG 516
           + E+ GI+F LAT QEI  AS+  C ISHASQLSNPFLGLPLE GKCESCGT E G+CEG
Sbjct: 11  DGELIGIRFGLATHQEICTASMMGCSISHASQLSNPFLGLPLEFGKCESCGTSEPGKCEG 70

Query: 517 HFGYIELPTPIYHPDHVNEXXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCCEETSHIS 696
           HFGYI+LP PIYHP+HV+E                     + GLAE++LS CCE+ + +S
Sbjct: 71  HFGYIDLPVPIYHPNHVSE--LKKLLSLLCLKCLKMKKNKSAGLAERLLSVCCEDAAQVS 128

Query: 697 INEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLASEVVAILKKI 876
           I E K  DG   L+LK+PS   P  G W FLE+YGFRYGD     R LL  EV+ IL++I
Sbjct: 129 ITEFKPRDGVCSLQLKLPSNKKPPPGFWNFLERYGFRYGDG--VKRILLPREVMQILRRI 186

Query: 877 SQDTRKKLSSK 909
            ++T+KKL+++
Sbjct: 187 PEETKKKLATR 197


>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata]
           gi|297325678|gb|EFH56098.1| NRPD1b [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1947

 Score =  204 bits (520), Expect = 3e-50
 Identities = 107/191 (56%), Positives = 130/191 (68%)
 Frame = +1

Query: 337 EAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEAGQCEG 516
           E EI GIKFALAT  EI  ASIS   I+H SQL+N FLGLPLE GKCESCG  E  +CEG
Sbjct: 11  EGEIVGIKFALATHHEICIASISGSAINHPSQLTNSFLGLPLEFGKCESCGATEPDKCEG 70

Query: 517 HFGYIELPTPIYHPDHVNEXXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCCEETSHIS 696
           HFGYI+LP PIYHP HVNE                     + GLA+++L  CCEE S IS
Sbjct: 71  HFGYIQLPVPIYHPAHVNELKQMLSLLCLKCLKIKKAKSTSGGLADRLLGVCCEEASQIS 130

Query: 697 INEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLASEVVAILKKI 876
           I + + +DGA YLELK+PS+S  + G W FLE+YG+RYG  S Y+R LLA EV  IL++I
Sbjct: 131 IRD-RASDGASYLELKLPSRSRLQAGCWNFLERYGYRYG--SDYTRPLLAREVKEILRRI 187

Query: 877 SQDTRKKLSSK 909
            ++TRKKL++K
Sbjct: 188 PEETRKKLTAK 198


>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
           arietinum]
          Length = 2263

 Score =  203 bits (517), Expect = 7e-50
 Identities = 106/201 (52%), Positives = 134/201 (66%), Gaps = 4/201 (1%)
 Frame = +1

Query: 319 PAATTFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGE 498
           P ++  +A++ GI+F++AT  EIS ASISD  ISHASQL+NPFLGLPLE G+CESCGT E
Sbjct: 5   PTSSVLDAKVIGIRFSMATRHEISTASISDSTISHASQLANPFLGLPLEFGRCESCGTSE 64

Query: 499 AGQCEGHFGYIELPTPIYHPDHVNE--XXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSC 672
           AG+CEGHFGYIELP PIYHP HV E                       + GLA+ +LS C
Sbjct: 65  AGKCEGHFGYIELPVPIYHPSHVTELKKILSLVCLNCLKLKKTKFPSSSSGLAQSLLSPC 124

Query: 673 CEE--TSHISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLA 846
           CE+   + +SI E KT DGA YL LK+ SKS    G W FLEKYG+RYG    ++R+LL 
Sbjct: 125 CEDVNAAQVSIREVKTADGACYLALKV-SKSKMHDGFWGFLEKYGYRYGGD--HTRALLP 181

Query: 847 SEVVAILKKISQDTRKKLSSK 909
            EV+ I+K+  Q+T +KL+ K
Sbjct: 182 CEVMEIIKRFPQETNRKLAIK 202


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
           max]
          Length = 2082

 Score =  201 bits (510), Expect = 4e-49
 Identities = 103/201 (51%), Positives = 135/201 (67%), Gaps = 4/201 (1%)
 Frame = +1

Query: 319 PAATTFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGE 498
           P ++  +  + GIKF +AT QEI  ASISD  ISHASQLSNPFLGLPLE G+CESCGT E
Sbjct: 5   PPSSVLDGTVVGIKFGMATRQEICTASISDSSISHASQLSNPFLGLPLEFGRCESCGTSE 64

Query: 499 AGQCEGHFGYIELPTPIYHPDHVNE--XXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSC 672
            G+CEGHFGYIELP PIYHP H+++                       + GLA++++S C
Sbjct: 65  VGKCEGHFGYIELPIPIYHPSHISDLKRMLSMVCLNCLKLRKTKLPASSSGLAQRLISPC 124

Query: 673 CEE--TSHISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLA 846
           C+E   + +SI E KT+DGA YL LK+ SKS  ++G W FLEKYG+RYG    ++R+LL 
Sbjct: 125 CQEDKAALVSIREVKTSDGACYLALKV-SKSKMQNGFWSFLEKYGYRYGGD--HTRALLP 181

Query: 847 SEVVAILKKISQDTRKKLSSK 909
            E + I+K+I  +T+KKL+ K
Sbjct: 182 CEAMEIIKRIPIETKKKLAGK 202


>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
          Length = 2054

 Score =  198 bits (503), Expect = 3e-48
 Identities = 102/197 (51%), Positives = 126/197 (63%), Gaps = 5/197 (2%)
 Frame = +1

Query: 334 FEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEAGQCE 513
           +E EI GI+F LA+ +EI  AS+S   ISHA+QLSNPFLGLPLE GKCESCGT + G CE
Sbjct: 10  YEGEIVGIRFGLASHREICTASVSGSSISHATQLSNPFLGLPLEFGKCESCGTSDLGNCE 69

Query: 514 GHFGYIELPTPIYHPDHVNE--XXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCCEETS 687
           GHFGYIELP PIYHP HV+E                       N G+AE++L+SCC++ S
Sbjct: 70  GHFGYIELPVPIYHPSHVSELKRMLSLLCLKCLKMKKNKFPVKNAGIAEQLLASCCQDAS 129

Query: 688 HISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDT---SMYSRSLLASEVV 858
            +SI E K  D   +L LK+PS      G W FLE+YGFRYG +    +  R+LL  EV+
Sbjct: 130 QVSIEEVK-KDTYSHLRLKVPSNKKLHEGFWNFLERYGFRYGGSPGEELLRRTLLPCEVM 188

Query: 859 AILKKISQDTRKKLSSK 909
            I KKI ++TRKKL  K
Sbjct: 189 EIFKKIPEETRKKLVGK 205


>ref|XP_007133762.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
           gi|561006762|gb|ESW05756.1| hypothetical protein
           PHAVU_011G206900g [Phaseolus vulgaris]
          Length = 2052

 Score =  198 bits (503), Expect = 3e-48
 Identities = 106/202 (52%), Positives = 133/202 (65%), Gaps = 5/202 (2%)
 Frame = +1

Query: 319 PAATTFEAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGE 498
           P ++  +  + G+KF +AT QEI  ASISD  ISHASQLSNPFLGLPLE G+CESCGT E
Sbjct: 5   PPSSVLDGMVVGVKFGMATRQEICTASISDSSISHASQLSNPFLGLPLEFGRCESCGTSE 64

Query: 499 AGQCEGHFGYIELPTPIYHPDHVNE--XXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSC 672
           AG+CEGHFGYIELP PIYHP H++E                         GLA++++S C
Sbjct: 65  AGKCEGHFGYIELPVPIYHPSHISELKRLLSLVCLNCLKMRKTKLSASGSGLAQRLVSPC 124

Query: 673 CEE--TSHISINEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRY-GDTSMYSRSLL 843
           CEE   + ISI E KT+DGA YL LK+ SKS      W FLEKYG+RY GD   ++R+LL
Sbjct: 125 CEEINAAQISIREVKTSDGACYLALKV-SKSKMHPDFWGFLEKYGYRYEGD---HTRALL 180

Query: 844 ASEVVAILKKISQDTRKKLSSK 909
             E + I+K+I  +T+KKL+ K
Sbjct: 181 PCEAMEIIKRIPIETKKKLAGK 202


>gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis thaliana]
          Length = 1976

 Score =  197 bits (501), Expect = 5e-48
 Identities = 102/191 (53%), Positives = 129/191 (67%)
 Frame = +1

Query: 337 EAEIKGIKFALATSQEISKASISDCPISHASQLSNPFLGLPLETGKCESCGTGEAGQCEG 516
           + EI GI FALA+  EI   SIS+  I+H SQL+N FLGLPLE GKCESCG  E  +CEG
Sbjct: 11  DGEIVGITFALASHHEICIQSISESAINHPSQLTNAFLGLPLEFGKCESCGATEPDKCEG 70

Query: 517 HFGYIELPTPIYHPDHVNEXXXXXXXXXXXXXXXXXXXXXNVGLAEKMLSSCCEETSHIS 696
           HFGYI+LP PIYHP HVNE                     + GLA+++L  CCEE S IS
Sbjct: 71  HFGYIQLPVPIYHPAHVNELKQMLSLLCLKCLKIKKAKGTSGGLADRLLGVCCEEASQIS 130

Query: 697 INEAKTTDGAYYLELKIPSKSNPRHGLWKFLEKYGFRYGDTSMYSRSLLASEVVAILKKI 876
           I + + +DGA YLELK+PS+S  + G W FLE+YG+RYG  S Y+R LLA EV  IL++I
Sbjct: 131 IKD-RASDGASYLELKLPSRSRLQPGCWNFLERYGYRYG--SDYTRPLLAREVKEILRRI 187

Query: 877 SQDTRKKLSSK 909
            +++RKKL++K
Sbjct: 188 PEESRKKLTAK 198