BLASTX nr result

ID: Mentha24_contig00045388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00045388
         (443 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subu...   140   2e-31
gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Men...   138   7e-31

>gb|AAF08793.1|AF182828_1 geranyl diphosphate synthase large subunit [Mentha x piperita]
           gi|10637876|emb|CAC10561.1| gpp synthase large subunit
           [Mentha x piperita] gi|158979013|gb|ABW86879.1| geranyl
           pyrophosphate synthase large subunit [Mentha x piperita]
          Length = 377

 Score =  140 bits (352), Expect = 2e-31
 Identities = 68/94 (72%), Positives = 74/94 (78%)
 Frame = +2

Query: 161 MSVLVNPVTKWPQTIGVRDVHXXXXXXXXXTAFHSHPLRAKLPFSLYFSSPIKGSASFSV 340
           MS LVNPV KWPQTIGV+DVH         T F SHPLR ++PFSLYFSSP+K  A+FSV
Sbjct: 1   MSALVNPVAKWPQTIGVKDVHGGRRRRSRSTLFQSHPLRTEMPFSLYFSSPLKAPATFSV 60

Query: 341 SAVYTKEDSEIRAEDPASSASPAFDFDGYMLRKA 442
           SAVYTKE SEIR +DPA S SPAFDFDGYMLRKA
Sbjct: 61  SAVYTKEGSEIRDKDPAPSTSPAFDFDGYMLRKA 94


>gb|ABR15420.1| geranyl pyrophosphate synthase large subunit [Mentha canadensis]
          Length = 377

 Score =  138 bits (348), Expect = 7e-31
 Identities = 67/94 (71%), Positives = 74/94 (78%)
 Frame = +2

Query: 161 MSVLVNPVTKWPQTIGVRDVHXXXXXXXXXTAFHSHPLRAKLPFSLYFSSPIKGSASFSV 340
           MS LVNPV KWPQTIG++DVH         T F SHPLR ++PFSLYFSSP+K  A+FSV
Sbjct: 1   MSALVNPVAKWPQTIGIKDVHGGRRRRSRSTLFLSHPLRTEMPFSLYFSSPLKAPATFSV 60

Query: 341 SAVYTKEDSEIRAEDPASSASPAFDFDGYMLRKA 442
           SAVYTKE SEIR +DPA S SPAFDFDGYMLRKA
Sbjct: 61  SAVYTKEGSEIRDKDPAPSTSPAFDFDGYMLRKA 94


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