BLASTX nr result

ID: Mentha24_contig00045357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00045357
         (390 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU20783.1| hypothetical protein MIMGU_mgv1a009040mg [Mimulus...    83   5e-14
ref|XP_006340244.1| PREDICTED: zinc finger CCCH domain-containin...    62   6e-08
ref|XP_004251186.1| PREDICTED: zinc finger CCCH domain-containin...    62   6e-08

>gb|EYU20783.1| hypothetical protein MIMGU_mgv1a009040mg [Mimulus guttatus]
          Length = 355

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 49/94 (52%), Positives = 55/94 (58%), Gaps = 12/94 (12%)
 Frame = -3

Query: 388 HFAHGQSDLKF---VDDG----ESKSAVSAPRKXXXXXXXXXXXXXXXXXA-----GDGE 245
           H+AHGQS+LK    V D      +K AVS PRK                 A     GD E
Sbjct: 260 HYAHGQSELKSHVSVSDSVHFEPAKEAVSIPRKPVPVSAFTAAPANNLVAAIPSSNGDEE 319

Query: 244 EKKMSKWKLTKKINRIYADWLDDLTPPHVSPIKE 143
            KK+SKWKLTKKINRIYADWLDD+TPPH SP +E
Sbjct: 320 SKKLSKWKLTKKINRIYADWLDDMTPPHNSPTQE 353


>ref|XP_006340244.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           isoform X1 [Solanum tuberosum]
           gi|565346403|ref|XP_006340245.1| PREDICTED: zinc finger
           CCCH domain-containing protein 39-like isoform X2
           [Solanum tuberosum]
          Length = 341

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
 Frame = -3

Query: 388 HFAHGQSDLKFVD-----DGESKSAVSAPR--KXXXXXXXXXXXXXXXXXAGDGEEKKMS 230
           HFAHGQS+L+        D  + S    PR                      + EEKK+ 
Sbjct: 251 HFAHGQSELQMPTGRVEMDMLTNSGPITPRPFSIQPVDSSSANTLVNASMQEEREEKKIH 310

Query: 229 KWKLTKKINRIYADWLDDLTPPHVSP 152
           KWKL+KKI+RIY DW+DDL PPH+ P
Sbjct: 311 KWKLSKKISRIYGDWIDDLVPPHLHP 336


>ref|XP_004251186.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Solanum lycopersicum]
          Length = 341

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
 Frame = -3

Query: 388 HFAHGQSDLKFVD-----DGESKSAVSAPR--KXXXXXXXXXXXXXXXXXAGDGEEKKMS 230
           HFAHGQS+L+        D  + S    PR                      + EEKK+ 
Sbjct: 251 HFAHGQSELQMPTGRVEMDMLTNSGPITPRPFSVQPVDSSSATTLVNASMQEEKEEKKIH 310

Query: 229 KWKLTKKINRIYADWLDDLTPPHVSP 152
           KWKL+KKI+RIY DW+DDL PPH+ P
Sbjct: 311 KWKLSKKISRIYGDWIDDLVPPHLHP 336


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