BLASTX nr result
ID: Mentha24_contig00045335
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00045335
(1122 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_004039788.1| hypothetical protein MPQ_1391 [Methylovorus ... 68 6e-09
ref|YP_007052748.1| PEP anchor domain-containing protein [Nostoc... 67 1e-08
ref|YP_436726.1| Rhs family protein [Hahella chejuensis KCTC 239... 66 2e-08
ref|WP_019883542.1| hypothetical protein [Methylophilus] 66 3e-08
ref|YP_545859.1| hypothetical protein Mfla_1750 [Methylobacillus... 65 4e-08
ref|YP_003051086.1| hypothetical protein Msip34_1313 [Methylovor... 65 5e-08
ref|YP_433329.1| Rhs family protein [Hahella chejuensis KCTC 239... 65 7e-08
ref|WP_018412282.1| hypothetical protein [Methyloversatilis sp. ... 63 3e-07
ref|WP_019921507.1| hypothetical protein [Duganella zoogloeoides] 62 3e-07
ref|WP_008447897.1| hypothetical protein [Janthinobacterium sp. ... 60 2e-06
ref|WP_008445553.1| hypothetical protein [Janthinobacterium sp. ... 59 3e-06
ref|YP_435791.1| hypothetical protein HCH_04667 [Hahella chejuen... 58 6e-06
ref|XP_004333472.1| RNA-directed RNA polymerase [Acanthamoeba ca... 58 8e-06
>ref|YP_004039788.1| hypothetical protein MPQ_1391 [Methylovorus sp. MP688]
gi|503207514|ref|WP_013442175.1| hypothetical protein
[Methylovorus sp. MP688] gi|312440446|gb|ADQ84552.1|
conserved hypothetical protein [Methylovorus sp. MP688]
Length = 307
Score = 68.2 bits (165), Expect = 6e-09
Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 2/240 (0%)
Frame = -1
Query: 921 EFDAISFNDLTITHGDIQGRVATRNNFKGINGSSIGDQITGNGLFTLIAGGDISLDGEAF 742
+F+A F+ + D +G VA N +NG S+ ++L+ GG+++ +
Sbjct: 32 KFNAFVFSTFNSQYSDTEGAVAVGGNTT-VNGYSVNANNKPYNGYSLVVGGNLNYTNGSI 90
Query: 741 PLSQNIFVGGSATDVPASVSARVTGNCPSSGCANDAFDNVLAYWNAFSSQLSAGTDNVDL 562
+ N +V G++T A ++G G A +F + A SS LS + N
Sbjct: 91 N-NGNAYVAGTSTTSSLGGGATISG-----GTAPFSFSDEKTELIALSSSLSKLSANGSA 144
Query: 561 SFENGIVTITCQSSTASLNFVNIDASEFNQITGYAIASCASTASFVFNILGSGDVEFNGN 382
+++ G VT T T+++ N+ ++ + + A AS + + N+ G G
Sbjct: 145 TYQYGGVTFT-GDGTSAVQVFNVSGADLYSVNYSSFAQLASNQTIIVNVSGDVAGFQGGT 203
Query: 381 PIESSGY-VVYNIAGARSVKVIS-SVNGNIVAPSATFNQVGGTVYGQLIAGNVINVVQIN 208
P S Y V++N A ++ + V G+I+AP AT GG + G +I + +QIN
Sbjct: 204 PNGFSNYNVLFNFYEATTLNFNNVGVYGSILAPYATVQGGGGQINGNVIVNAWNSNIQIN 263
>ref|YP_007052748.1| PEP anchor domain-containing protein [Nostoc sp. PCC 7107]
gi|504928684|ref|WP_015115786.1| PEP anchor
domain-containing protein [Nostoc sp. PCC 7107]
gi|427362876|gb|AFY45598.1| PEP motif putative anchor
domain protein [Nostoc sp. PCC 7107]
Length = 390
Score = 67.4 bits (163), Expect = 1e-08
Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 8/239 (3%)
Frame = -1
Query: 921 EFDAISFNDLTITHGDIQGRVATRNNFKGINGSSIGDQITGNGLFT-LIAGGDISLDGEA 745
+++ F D+ + D +GRVA N N NG T LI GGD++ +G
Sbjct: 38 DYNVFVFGDMNQS-SDSEGRVAVGGNATFSNFGIADRLANSNGTDTRLIVGGDLTYNGGQ 96
Query: 744 FPLSQNIFVGGSATDVPASVSARVTGNCPSSGCANDAFDNVLAYWNAFSSQLSAGTDNVD 565
N VGGS V SV+ + NC S F+ S L + +
Sbjct: 97 V-FGGNAVVGGS---VKTSVNFNCSSNCGVSSGTPLNFETARQELTYLSESLGGLSSTGN 152
Query: 564 LSFENGIVTITCQSSTASLNFVNIDASEFNQITGYAIASCASTASFVFNILGSG------ 403
++ G + + Q + + LN ID S+F+ T IA S ++ +FNILG+
Sbjct: 153 TEYKWGGIYL--QGNNSDLNIFTIDGSQFSNSTYLNIAGVGSNSTVIFNILGNSVNISNF 210
Query: 402 DVEFNGNPIESSGYVVYNIAGARSVKVIS-SVNGNIVAPSATFNQVGGTVYGQLIAGNV 229
+ FNG ++ +++N A VK S G+++A A G V G L+A ++
Sbjct: 211 GLNFNGLNKQN---ILFNFVDATQVKTTGFSFYGSVLATKANVQFNNGNVEGTLVASSL 266
>ref|YP_436726.1| Rhs family protein [Hahella chejuensis KCTC 2396]
gi|499718626|ref|WP_011399360.1| type IV secretion
protein Rhs [Hahella chejuensis]
gi|83636334|gb|ABC32301.1| Rhs family protein [Hahella
chejuensis KCTC 2396]
Length = 3862
Score = 66.2 bits (160), Expect = 2e-08
Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 14/279 (5%)
Frame = -1
Query: 1002 YISSAIGSQICTGSNSFTLQGTSY-PGYEFDAISFNDLTITHGDIQGRVATRNNFKGING 826
Y++S + S + G SF + + P F+A+ F++ D++GR+A + +N
Sbjct: 4 YVASFL-STVILGLFSFQVSAKDFGPAQRFNALVFDEFLALSSDVEGRLAAGGDIS-LNN 61
Query: 825 SSIGDQITGNGLF-TLIAGGDISLDGEAFPLSQ----NIFVGGSATDVPASVSARVTGNC 661
S+GD++ + LIAGGDI FP + N+ GGS T++ +V +
Sbjct: 62 YSVGDKLNASEAGDVLIAGGDIK-----FPSGRVYYGNVIAGGSVTNIGDAVRHGMAQGA 116
Query: 660 PSSGCANDAFD--NVLAYWNAFSSQLSAGTDNVDLSFENGIVTITCQSSTASLNFVNIDA 487
G A + D +V AY S LS N + + G + +T + F
Sbjct: 117 KIKGGATPSVDFPSVQAYLEQLSQDLSKLKANGKVESKWGGLYLTAACDSNLQVFQLSGD 176
Query: 486 SEFNQITGYAIASCA-STASFVFNILGSGDVEFNGNPIES----SGYVVYNIAGARSVKV 322
F T SCA + A+++ NI G +G ++S + VV+N A+ +++
Sbjct: 177 LVFPAHTFEVDLSCAPADATYILNIDGQ-QTGMSGMSLQSLANVADKVVFNFFEAQVLEL 235
Query: 321 IS-SVNGNIVAPSATFNQVGGTVYGQLIAGNVINVVQIN 208
S V G+++AP A + G + G L A +QIN
Sbjct: 236 QSIGVEGSVLAPQAVVIEPQGVLRGHLFAKAWYGEMQIN 274
>ref|WP_019883542.1| hypothetical protein [Methylophilus]
Length = 305
Score = 65.9 bits (159), Expect = 3e-08
Identities = 61/244 (25%), Positives = 108/244 (44%), Gaps = 6/244 (2%)
Frame = -1
Query: 921 EFDAISFNDLTITHGDIQGRVATRNNFK--GINGSSIGDQITGNGLFTLIAGGDISLDGE 748
+F+ FN+ T ++ D++G VA NF G + + + GN +L+ G +++ +
Sbjct: 29 QFNVFVFNNFTSSYSDVEGAVAVGGNFNVTGYAVNELNKAVAGN---SLVVGNNLTYNNG 85
Query: 747 AFPLSQNIFVGGSATDVPASVSARVTGNCPSSGCANDAFDNVLAYWNAFSSQLSAGTDNV 568
+ + NI VGG+ + + T + P + F N Y S+ L+ +
Sbjct: 86 SVK-NGNIDVGGTTSTSSFGFTGAYTDSDPIN------FTNERTYLLNLSASLNNLVNTG 138
Query: 567 DLSFENGIVTITCQSSTASLNFVNIDASEFNQITGYAIASCASTASFVFNILGSGDVEFN 388
++ + +T S+ +S +ID S FN + ++ + + NI GSG + FN
Sbjct: 139 TATYNYSGLQLTA-SNNSSAQIFDIDGSLFNSRNNTTFSGFSAGQTIILNISGSG-LTFN 196
Query: 387 ---GNPIESSGY-VVYNIAGARSVKVISSVNGNIVAPSATFNQVGGTVYGQLIAGNVINV 220
G S G+ VVYN A ++ S G I+AP A + G +IA +
Sbjct: 197 GGTGTDFASYGFNVVYNFYEATALSTGSGATGTILAPLANITGGFTAINGNVIANSWNTN 256
Query: 219 VQIN 208
Q+N
Sbjct: 257 TQVN 260
>ref|YP_545859.1| hypothetical protein Mfla_1750 [Methylobacillus flagellatus KT]
gi|499799238|ref|WP_011479972.1| hypothetical protein
[Methylobacillus flagellatus] gi|91710090|gb|ABE50018.1|
hypothetical protein Mfla_1750 [Methylobacillus
flagellatus KT]
Length = 315
Score = 65.5 bits (158), Expect = 4e-08
Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Frame = -1
Query: 921 EFDAISFNDLTITHGDIQGRVATRNNFKGINGSSIGDQITGNGLFTLIAG--GDISLDGE 748
+++A F D T + G +A + +NG+S+ + I GN ++ G GD G
Sbjct: 30 DYNAFIFGDYTANGNSVAGALAIGGD-ASLNGNSVSN-INGNDYAVVVGGNLGDTPWGGS 87
Query: 747 AFPLSQNIFVGGSATDVPASVSARVTGNCPSSGCANDAFDNVLAYWNAFSSQLS--AGTD 574
A + N++VGG+ + + + T + PS+ A F +Y A SS LS + T
Sbjct: 88 A---NGNLWVGGT-NNKGGNYTISGTLDNPSTAPAPVDFAAAESYLTALSSGLSNVSATG 143
Query: 573 NVDLSFENGIVTITCQSSTASLNFVNIDASEFNQITGYAIASCASTASFVFNILGSGDV- 397
+ E + S + + F N+DASEF ++ + VFN+ GS V
Sbjct: 144 SYSPLDEWNQNSKVFTGSGSGVEFFNLDASEFASFNNLTFNGFSAGTTLVFNVAGSDAVL 203
Query: 396 EFNGNPIESSGYVVYNIAGARSVKV-ISSVNGNIVAPSATFNQVGGTVYGQLIAGNVINV 220
+ + + V++N A SVK+ +++N NI+A +AT G +YG +IA N
Sbjct: 204 GWQWQSLSNDYNVLFNFYEATSVKLENAAINANILAVNATITG-SGNLYGTVIANQWDNA 262
Query: 219 VQI 211
+ +
Sbjct: 263 MTL 265
>ref|YP_003051086.1| hypothetical protein Msip34_1313 [Methylovorus glucosetrophus
SIP3-4] gi|506310261|ref|WP_015830036.1| hypothetical
protein [Methylovorus glucosotrophus]
gi|253985702|gb|ACT50559.1| protein of unknown function
DUF1555 [Methylovorus glucosetrophus SIP3-4]
Length = 345
Score = 65.1 bits (157), Expect = 5e-08
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 2/240 (0%)
Frame = -1
Query: 921 EFDAISFNDLTITHGDIQGRVATRNNFKGINGSSIGDQITGNGLFTLIAGGDISLDGEAF 742
+F+A F+ + D +G VA + +NG S+ ++L+ GG+++ +
Sbjct: 70 KFNAFVFSTFNSQYSDTEGAVAVGGDTT-VNGYSVNANNKPYNGYSLVVGGNLNYTNGSI 128
Query: 741 PLSQNIFVGGSATDVPASVSARVTGNCPSSGCANDAFDNVLAYWNAFSSQLSAGTDNVDL 562
+ N +V G++T A ++G G A +F + A SS LS + N
Sbjct: 129 N-NGNAYVAGTSTTSSLGGGATISG-----GTAPFSFSDEKTELIALSSSLSKLSANGSA 182
Query: 561 SFENGIVTITCQSSTASLNFVNIDASEFNQITGYAIASCASTASFVFNILGSGDVEFNGN 382
+++ G VT T T+++ N+ ++ + A AS + + N+ G G
Sbjct: 183 TYQYGGVTFT-GDGTSAVQVFNVSGADLYSVNYSNFAQLASNQTIIVNVSGDVAGFQGGT 241
Query: 381 PIESSGY-VVYNIAGARSVKVIS-SVNGNIVAPSATFNQVGGTVYGQLIAGNVINVVQIN 208
P S Y V++N A ++ + V G+I+AP AT GG + G +I + +QIN
Sbjct: 242 PNGFSNYNVLFNFYEATTLNFNNVGVYGSILAPYATVQGGGGQINGNVIVNAWNSNIQIN 301
>ref|YP_433329.1| Rhs family protein [Hahella chejuensis KCTC 2396]
gi|499715241|ref|WP_011395975.1| type IV secretion
protein Rhs [Hahella chejuensis]
gi|83632937|gb|ABC28904.1| Rhs family protein [Hahella
chejuensis KCTC 2396]
Length = 3976
Score = 64.7 bits (156), Expect = 7e-08
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 14/279 (5%)
Frame = -1
Query: 1002 YISSAIGSQICTGSNSFTLQGTSY-PGYEFDAISFNDLTITHGDIQGRVATRNNFKGING 826
Y++S + S + G SF + + P ++A+ F+ D++GR+A + +N
Sbjct: 4 YVASFL-STVILGLFSFQVSAKDFGPAQRYNALVFDVFDALSSDVEGRLAVGGDIT-LNN 61
Query: 825 SSIGDQITGNGLF-TLIAGGDISLDGEAFPLSQ----NIFVGGSATDVPASVSARVTGNC 661
S+GD++ + LIAGGDI FP + N+ GGS D+ +V +
Sbjct: 62 YSVGDKLNASEAGDVLIAGGDIK-----FPSGRVYYGNVIAGGSVKDIGDAVQHGMAQGA 116
Query: 660 PSSGCANDA--FDNVLAYWNAFSSQLSAGTDNVDLSFENGIVTITCQSSTASLNFVNIDA 487
G A + F + AY S LS N + + G + +T + F A
Sbjct: 117 KIKGGATPSVDFSSAQAYLEQLSQDLSKLKANGKVESKWGGLYLTAACDSNLQVFQLSGA 176
Query: 486 SEFNQITGYAIASCA-STASFVFNILGSGDVEFNGNPIES----SGYVVYNIAGARSVKV 322
F T SCA + A+++FNI G +G ++S + VV+N A +++
Sbjct: 177 QVFPAHTFEVDLSCAPADATYIFNIDGQ-QTGMSGMSLQSLANVADKVVFNFYEAYVLEL 235
Query: 321 IS-SVNGNIVAPSATFNQVGGTVYGQLIAGNVINVVQIN 208
S V G+++AP A G + G L A +QIN
Sbjct: 236 ESIGVEGSVLAPKAEVVNPQGVLRGHLFAKAWYGEMQIN 274
>ref|WP_018412282.1| hypothetical protein [Methyloversatilis sp. NVD]
Length = 332
Score = 62.8 bits (151), Expect = 3e-07
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 2/239 (0%)
Frame = -1
Query: 918 FDAISFNDLTITHGDIQGRVATRNNFKGINGSSIGDQITGNGLFTLIAGGDISLDGEAFP 739
++ +SF D + D++G VA N + + S + NG + L+ GG+++ G
Sbjct: 53 YNLLSFGDFVASGSDVEGAVAVAGNVQASSYSINANNRAANG-YALVVGGNLNY-GNGSI 110
Query: 738 LSQNIFVGGSATDVPASVSARVTGNCPSSGCANDAFDNVLAYWNAFSSQLSAGTDNVDLS 559
+ +VGGS + S SG + +F + L Y + S LS +
Sbjct: 111 SHGDAYVGGSRSTYSLGFS-----GAWQSGVSPLSFSDQLNYLSNVSLSLSGLASTGTTA 165
Query: 558 FENGIVTITCQSSTASLNFVNIDASEFNQITGYAIASCASTASFVFNILGSGDVEFNGNP 379
+ G + T + + N+ S+ + ++++ A+ ++ + N+ GS G P
Sbjct: 166 AQWGGLYFT--GGGSGVEVFNVSGSDLASVNWASLSNIAAGSTIILNVSGSSAGLSGGTP 223
Query: 378 IESSGY-VVYNIAGARSVKVIS-SVNGNIVAPSATFNQVGGTVYGQLIAGNVINVVQIN 208
+ Y V+YN A S+ + V G+I+AP A+ GG + G +I + + +Q+N
Sbjct: 224 NVFANYNVLYNFYEATSLSFNNVGVYGSILAPLASVTGGGGQINGNVIVADWNSGIQVN 282
>ref|WP_019921507.1| hypothetical protein [Duganella zoogloeoides]
Length = 293
Score = 62.4 bits (150), Expect = 3e-07
Identities = 54/228 (23%), Positives = 99/228 (43%), Gaps = 3/228 (1%)
Frame = -1
Query: 906 SFNDLTITHGDIQGRVATRNNFKGINGSSIGDQITGNGLFTLIAGGDISLDGEAFPLSQN 727
SFND G + G + + N S G + ++AG D + S N
Sbjct: 20 SFNDFKSGSGRVDGSILAGRDISLANYSVNTSNTGAYGDYAVVAGRDFTFT------SGN 73
Query: 726 IFVGGSATDVPASVSARVTGNCP-SSGCANDAFDNVLAYWNAFSSQLSAGTDNVDLSFE- 553
+ G + + ++ T N P ++G A + + S+ L+A T +
Sbjct: 74 VGHGSTYVGGTSYLNQSGTLNGPVTTGTAPADLNALATSLTQTSNALAALTPTASTEQKW 133
Query: 552 NGIVTITCQSSTASLNFVNIDASEFNQITGYAIASCASTASFVFNILGSGDVEFNGNPIE 373
NGI + + + +N+DAS + + Y+ ++ ++ A+ + N LG F G
Sbjct: 134 NGIFI---NGTNSQVEVINLDASWLDSSSWYSFSNLSAGATLIVNFLGDS-ATFKGGFSA 189
Query: 372 SSGY-VVYNIAGARSVKVISSVNGNIVAPSATFNQVGGTVYGQLIAGN 232
GY V++N A A ++ ++ N N++AP AT GT+YG ++ +
Sbjct: 190 FDGYNVLFNFADATTLNFVNGFNANVLAPKATVTGGSGTIYGTVVVND 237
>ref|WP_008447897.1| hypothetical protein [Janthinobacterium sp. HH01]
gi|444786728|gb|ELX08276.1| hypothetical protein
Jab_2c03220 [Janthinobacterium sp. HH01]
Length = 326
Score = 60.1 bits (144), Expect = 2e-06
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 24/287 (8%)
Frame = -1
Query: 999 ISSAIGSQICTGSNSFTLQGTSYPGYEFDAISFNDLTITHGDIQGRVATRNNFKGINGSS 820
+++A +Q S L + Y GY + S D++GR+A N NG+S
Sbjct: 17 VAAACSAQAAAPSFDLGL-ASGYSGYFYGNAS------NFTDVEGRLAVGGNLSA-NGAS 68
Query: 819 IGDQIT-GNGLFTLIAGGDISL---DGEAFPLSQNIFVGGSATDVPASVSAR-------V 673
IG + G +++ GG++ L D A PL+ V +A+ P + +
Sbjct: 69 IGYRTPYGVTAPSVVVGGNVKLSSGDIYAAPLTN---VNTNASIGPITEYTKNYNGYGVY 125
Query: 672 TGNCPSSGCANDAFDNVLAYWN---------AFSSQLSAGTDNVDLSFENGIVTITCQSS 520
GN SS N + N+ +Y + S+ L++ N ++F NG + + +S
Sbjct: 126 GGNNTSSSYLNLSKANISSYTDFSAAKTQLTGLSNTLNSQAGNGTVNFANGGIELVGNNS 185
Query: 519 TASLNFVNIDASEFNQITGYAIASCASTASFVFNILGSGDVEFNGNP----IESSGYVVY 352
A L N++ + +T +++ A+ V N+ G+GDV F G + V++
Sbjct: 186 -AGLQVFNVNTRNLSNLT---LSNVKDGATVVINVTGTGDVVFGGGQDGLLEKLRANVLF 241
Query: 351 NIAGARSVKVISSVNGNIVAPSATFNQVGGTVYGQLIAGNVINVVQI 211
N+ A VKV + V G+++A A + G + G ++A ++I+ V+I
Sbjct: 242 NLNDANVVKVNTFVWGSVLANDAVLSG-AGHLEGSIVAKSLISAVEI 287
>ref|WP_008445553.1| hypothetical protein [Janthinobacterium sp. HH01]
gi|444791275|gb|ELX12822.1| hypothetical protein
Jab_1c14370 [Janthinobacterium sp. HH01]
Length = 312
Score = 59.3 bits (142), Expect = 3e-06
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 3/239 (1%)
Frame = -1
Query: 915 DAISFNDLTITHGDIQGRVATRNNFKGINGSSIGDQITGNGLFTLIAGGDISLDGEAFPL 736
+ SF D D++G + + + + S + + G ++LI G D+ +
Sbjct: 35 NVFSFTDFKAPSADVEGAIMAGRDVQLSSYSVNANNVDAFGHYSLIVGRDLKFTSGSIK- 93
Query: 735 SQNIFVG--GSATDVPASVSARVTGNCPSSGCANDAFDNVLAYWNAFSSQLSAGTDNVDL 562
+ + FVG S T S TG P + ++ A SS LS +
Sbjct: 94 NGDTFVGRTSSVTKQVDVYSKIQTGTAPVN------MSSLAGKLTATSSSLSKLSTTGTA 147
Query: 561 SFENGIVTITCQSSTASLNFVNIDASEFNQITGYAIASCASTASFVFNILGSGDVEFNGN 382
+ + G + I S + +IDA +++T + ++ + ++ + NI G FNG
Sbjct: 148 TEQWGGLNIAGTKSKTGVEVFDIDAKTLSKVTYFNFSNLTAGSTLIMNISGDKG-SFNGG 206
Query: 381 PIESSGY-VVYNIAGARSVKVISSVNGNIVAPSATFNQVGGTVYGQLIAGNVINVVQIN 208
Y V++N A + + + V GNI+AP A+ N G + G +I + + V+IN
Sbjct: 207 YQGFENYNVLFNFYQATDLGIHTGVTGNILAPLASVNGGSGVIDGNVIVNSWSSSVRIN 265
>ref|YP_435791.1| hypothetical protein HCH_04667 [Hahella chejuensis KCTC 2396]
gi|499717697|ref|WP_011398431.1| hypothetical protein
[Hahella chejuensis] gi|83635399|gb|ABC31366.1| conserved
hypothetical protein [Hahella chejuensis KCTC 2396]
Length = 308
Score = 58.2 bits (139), Expect = 6e-06
Identities = 64/274 (23%), Positives = 108/274 (39%), Gaps = 9/274 (3%)
Frame = -1
Query: 1002 YISSAIGSQICTGSNSFTLQGTSYPGYEFDAISFNDLTITHGDIQGRVATRNNFKGINGS 823
Y + +G +NS+ ++ D T + D +G +A N + G
Sbjct: 8 YAITLVGFSAAISANSYATPVNLGAAANYNGFFHGDFTSSPNDSEGALAVGGN-ASLTGY 66
Query: 822 SIGDQITGNGLFTLIAGGDISLDGEAFPLSQNIFVGGSATDVPASVSARVTGNCPSSGCA 643
++ +GL ++ GGD S G + + VGG T + SA V G
Sbjct: 67 TLNSFRENDGL-AIVVGGDYSHVGG--DIHGDALVGGQFT----TASAGVFGTVKDHAML 119
Query: 642 NDAFDNVLAYWNAFSSQLSAGTDNVDLSFENGIVTITCQSSTASLNFVNIDASEFNQITG 463
FD A S +LS D++ ++ + G +T SS F NI +F + G
Sbjct: 120 PINFDAEFAKLTQLSQELSLA-DSLGVTEQWGALTFNGDSSGGQQIF-NISEKDFESVWG 177
Query: 462 YAIASCASTASFVFNILGSG-DVEFNGNPIESSGY--------VVYNIAGARSVKVISSV 310
+ + N+ G D++ I++S + V++N A + + +
Sbjct: 178 FFAKDIGQHQELIINVAGDVIDIDPADYKIKASDWAWAGNETSVIFNFYEATQINLSAGF 237
Query: 309 NGNIVAPSATFNQVGGTVYGQLIAGNVINVVQIN 208
G I+AP A GG V GQ+IA + Q+N
Sbjct: 238 YGTILAPGADIFANGGHVDGQVIAHSWQGANQLN 271
>ref|XP_004333472.1| RNA-directed RNA polymerase [Acanthamoeba castellanii str. Neff]
gi|440790173|gb|ELR11459.1| RNA-directed RNA polymerase
[Acanthamoeba castellanii str. Neff]
Length = 1135
Score = 57.8 bits (138), Expect = 8e-06
Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 21/292 (7%)
Frame = -1
Query: 1005 GYISSAIGSQICTGS--------NSFTLQGTSYPGYEFDAISFNDLTITHGDIQGRVATR 850
G +S +Q C S N F L ++ GY FD I+ GD++GRVA+
Sbjct: 14 GLCASFAAAQTCPPSLLGSASAYNVFLLGSSAANGYTFDLIN--------GDVEGRVASN 65
Query: 849 NNFKGIN---GSSIGDQITGNGLFTLIAGGDISLDGEAFPLSQNIFVGGSATDVPASVSA 679
NF+ +N G+ +G+ T+I GG S + L V S+ +
Sbjct: 66 GNFRAVNFGVGTRLGN--CNASTPTVIIGGASSSVSFSGGLQCGSLVTESSATIVTLPGF 123
Query: 678 RVTGNCPSSGCANDAFDNVLAYWNAFSSQLSAGTDNVDLSFENGIVTITCQSSTASLNFV 499
G ++ + A +Q S+ + IT Q ++ +
Sbjct: 124 ANNGQLVQGSVSDLTGIDFAAAKTELQAQASSLCSAGGIGATRSGNAITLQGTSGASQAF 183
Query: 498 NIDASEFNQITG--YAIASCASTASFVFNILGSGDVEFNG-----NPIESSGYVVYNIAG 340
++ ++ N + + ++ V NI+GSG + G N + SSG V Y +
Sbjct: 184 TVNVADINVASSLTLTVPDASAVEQVVVNIVGSGAINMGGFQTFLNGV-SSGLVTYVVCE 242
Query: 339 ARSVKVIS-SVNGNIVAPSATFNQVGGTVYGQLIAGNVINV--VQINRPSCP 193
A +V + + + GN++APS+T + + G ++A + +++ P+CP
Sbjct: 243 APTVTINNFGLYGNLLAPSSTVSIQNAQLLGNVVALTLTGTGSGEVHVPTCP 294