BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00045261
         (690 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]                230   4e-58
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   224   2e-56
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   224   2e-56
gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Ho...   222   8e-56
gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subc...   222   8e-56
gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryz...   222   8e-56
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   220   3e-55
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  219   9e-55
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...   218   1e-54
emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]   218   2e-54
gb|AAB82754.1| retrofit [Oryza longistaminata]                        216   4e-54
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   216   4e-54
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   216   7e-54
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   215   1e-53
gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-...   215   1e-53
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   214   3e-53
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   214   3e-53
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-...   214   3e-53
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi...   213   4e-53
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...   213   4e-53

>gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]
          Length = 1012

 Score =  230 bits (586), Expect = 4e-58
 Identities = 110/205 (53%), Positives = 145/205 (70%), Gaps = 2/205 (0%)
 Frame = +1

Query: 19   SFVLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQF--HDPLLYRSTVGALQY 192
            S +L+Q++Y +E+L+R+GM+ CHP  +P+  + KL+   G +    D   Y S VGALQY
Sbjct: 744  SMLLTQERYATEVLKRSGMDKCHPVDTPLCSSEKLSIEDGNKLGSEDATKYCSVVGALQY 803

Query: 193  LTLTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFAD 372
            LTLTRPDI+  VNK+ QFLHSP   HW+A KR+LRY+KGT   G+ FS S S+ + AFAD
Sbjct: 804  LTLTRPDISFAVNKVCQFLHSPTTIHWSAVKRILRYIKGTTKLGIKFSKSESMLVSAFAD 863

Query: 373  ADYAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYL 552
            AD+AGC+D+RRST G  +F G+NL+ W AKKQ  VSRSS EAEY++LANAT ++IW+  L
Sbjct: 864  ADWAGCVDDRRSTGGFAVFLGNNLISWTAKKQPTVSRSSTEAEYKALANATAEMIWVQKL 923

Query: 553  CCELGIPSSPPHQLWCDNTSAATFS 627
              ELG+   P  +LWCDN  A   S
Sbjct: 924  LNELGVRHPPRARLWCDNLGATYLS 948


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  224 bits (572), Expect = 2e-56
 Identities = 114/206 (55%), Positives = 142/206 (68%)
 Frame = +1

Query: 1    VVQK*ASFVLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQFHDPLLYRSTVG 180
            VV+    F LSQ KY  +LL RT M    P  +P  +   L+   GE F D  LYRSTVG
Sbjct: 1088 VVRSGTMFHLSQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVG 1147

Query: 181  ALQYLTLTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIE 360
            ALQYLTLTRPDI+  VNK  QF+ +P   HW A KR+LRYLKGT S+G+    S+SL I 
Sbjct: 1148 ALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLDIH 1207

Query: 361  AFADADYAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIW 540
             + DAD+A C D+RRST G+ IF G NLV W++ KQ+VVSRSSAE+EYR+LA+AT+++IW
Sbjct: 1208 GYTDADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEMIW 1267

Query: 541  LHYLCCELGIPSSPPHQLWCDNTSAA 618
            + Y+  EL + SS P  LWCDN SAA
Sbjct: 1268 IQYVLQELCLSSSSPPLLWCDNKSAA 1293


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  224 bits (572), Expect = 2e-56
 Identities = 114/206 (55%), Positives = 142/206 (68%)
 Frame = +1

Query: 1    VVQK*ASFVLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQFHDPLLYRSTVG 180
            VV+    F LSQ KY  +LL RT M    P  +P  +   L+   GE F D  LYRSTVG
Sbjct: 946  VVRSGTMFHLSQHKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVG 1005

Query: 181  ALQYLTLTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIE 360
            ALQYLTLTRPDI+  VNK  QF+ +P   HW A KR+LRYLKGT S+G+    S+SL I 
Sbjct: 1006 ALQYLTLTRPDISFAVNKACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLDIH 1065

Query: 361  AFADADYAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIW 540
             + DAD+A C D+RRST G+ IF G NLV W++ KQ+VVSRSSAE+EYR+LA+AT+++IW
Sbjct: 1066 GYTDADWASCPDDRRSTGGYGIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEMIW 1125

Query: 541  LHYLCCELGIPSSPPHQLWCDNTSAA 618
            + Y+  EL + SS P  LWCDN SAA
Sbjct: 1126 IQYVLQELCLSSSSPPLLWCDNKSAA 1151


>gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
            sativa Japonica Group]
          Length = 1150

 Score =  222 bits (566), Expect = 8e-56
 Identities = 108/203 (53%), Positives = 139/203 (68%), Gaps = 2/203 (0%)
 Frame = +1

Query: 25   VLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQFH--DPLLYRSTVGALQYLT 198
            VLSQ KY  ++L+R GM+ C P  +P++ + KL+   G      D   YRS VGALQYLT
Sbjct: 798  VLSQDKYTHDILKRIGMSTCKPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLT 857

Query: 199  LTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFADAD 378
            LTRPDIA ++NK+ QFLHSP   HW+A KR++RYL+GT   GL    S S+ + AF+DAD
Sbjct: 858  LTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFSDAD 917

Query: 379  YAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYLCC 558
            +AGC+D+RRST G  +F GSNL+ W+ +KQ  VSRSS EAEY++LANAT +VIW+  L  
Sbjct: 918  WAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVSRSSTEAEYKALANATAEVIWVQTLLK 977

Query: 559  ELGIPSSPPHQLWCDNTSAATFS 627
            ELGI      +LWCDN  A   S
Sbjct: 978  ELGIQCPSMARLWCDNLGATYLS 1000


>gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  222 bits (566), Expect = 8e-56
 Identities = 108/203 (53%), Positives = 139/203 (68%), Gaps = 2/203 (0%)
 Frame = +1

Query: 25   VLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQFH--DPLLYRSTVGALQYLT 198
            VLSQ KY  ++L+R GM+ C P  +P++ + KL+   G      D   YRS VGALQYLT
Sbjct: 760  VLSQDKYTHDILKRIGMSTCKPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLT 819

Query: 199  LTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFADAD 378
            LTRPDIA ++NK+ QFLHSP   HW+A KR++RYL+GT   GL    S S+ + AF+DAD
Sbjct: 820  LTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFSDAD 879

Query: 379  YAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYLCC 558
            +AGC+D+RRST G  +F GSNL+ W+ +KQ  VSRSS EAEY++LANAT +VIW+  L  
Sbjct: 880  WAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVSRSSTEAEYKALANATAEVIWVQTLLK 939

Query: 559  ELGIPSSPPHQLWCDNTSAATFS 627
            ELGI      +LWCDN  A   S
Sbjct: 940  ELGIQCPSMARLWCDNLGATYLS 962


>gb|AAL86510.1|AC099040_14 putative retrotransposon protein [Oryza sativa Japonica Group]
          Length = 1139

 Score =  222 bits (566), Expect = 8e-56
 Identities = 108/203 (53%), Positives = 139/203 (68%), Gaps = 2/203 (0%)
 Frame = +1

Query: 25   VLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQFH--DPLLYRSTVGALQYLT 198
            VLSQ KY  ++L+R GM+ C P  +P++ + KL+   G      D   YRS VGALQYLT
Sbjct: 766  VLSQDKYTHDILKRIGMSTCKPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLT 825

Query: 199  LTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFADAD 378
            LTRPDIA ++NK+ QFLHSP   HW+A KR++RYL+GT   GL    S S+ + AF+DAD
Sbjct: 826  LTRPDIAFSINKVCQFLHSPTLTHWSAVKRIIRYLRGTVGMGLKIQKSQSMLVNAFSDAD 885

Query: 379  YAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYLCC 558
            +AGC+D+RRST G  +F GSNL+ W+ +KQ  VSRSS EAEY++LANAT +VIW+  L  
Sbjct: 886  WAGCVDDRRSTSGFAVFLGSNLISWSVRKQATVSRSSTEAEYKALANATAEVIWVQTLLK 945

Query: 559  ELGIPSSPPHQLWCDNTSAATFS 627
            ELGI      +LWCDN  A   S
Sbjct: 946  ELGIQCPSMARLWCDNLGATYLS 968


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  220 bits (561), Expect = 3e-55
 Identities = 108/206 (52%), Positives = 141/206 (68%), Gaps = 2/206 (0%)
 Frame = +1

Query: 16   ASFVLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQF--HDPLLYRSTVGALQ 189
            +  VL+Q+KY+++LL R GM  C P ++P++ + KLT + G+    +D   YRS VGALQ
Sbjct: 987  SGIVLTQEKYVTDLLRRVGMTDCKPVSTPLSTSEKLTLHEGDLLGPNDASNYRSVVGALQ 1046

Query: 190  YLTLTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFA 369
            YLTLTRPDI   VNK+ QFLH+P   HWAA KR+LRYLK     GL  S S S+ +  ++
Sbjct: 1047 YLTLTRPDIYFPVNKVCQFLHAPTIVHWAAMKRILRYLKQCTKLGLKISKSKSMLVSGYS 1106

Query: 370  DADYAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHY 549
            DAD+AG ID+RRST G  +F G NLV WNAKKQ  V RSS E+EY++LANAT +++W+  
Sbjct: 1107 DADWAGNIDDRRSTGGFAVFLGDNLVSWNAKKQATVPRSSTESEYKALANATAEIMWIQT 1166

Query: 550  LCCELGIPSSPPHQLWCDNTSAATFS 627
            L  EL +PS P  +LWCDN  A   S
Sbjct: 1167 LLEELSVPSPPMARLWCDNLGAKYLS 1192


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  219 bits (557), Expect = 9e-55
 Identities = 105/203 (51%), Positives = 142/203 (69%), Gaps = 2/203 (0%)
 Frame = +1

Query: 25   VLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQF--HDPLLYRSTVGALQYLT 198
            VL+Q+KY ++LL+R  M++C P ++P++++ KLT Y G     +D   YRS VGALQYLT
Sbjct: 1170 VLTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLT 1229

Query: 199  LTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFADAD 378
            LTRPDIA +VNK+ QFLH+P  DHW A KR+LRYL    S GL    S+S  +  ++DAD
Sbjct: 1230 LTRPDIAYSVNKVCQFLHAPTTDHWTAVKRILRYLNQCTSLGLNIHKSASTLVHGYSDAD 1289

Query: 379  YAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYLCC 558
            +AG +D+R+ST G  +F GSNLV W+A+KQ  VSRSS EAEY+++AN T ++IW+  L  
Sbjct: 1290 WAGSVDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLR 1349

Query: 559  ELGIPSSPPHQLWCDNTSAATFS 627
            ELGI S    ++WCDN  A   S
Sbjct: 1350 ELGIDSPKAAKIWCDNLGAKYLS 1372


>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
            gi|31430072|gb|AAP52036.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1058

 Score =  218 bits (555), Expect = 1e-54
 Identities = 105/205 (51%), Positives = 141/205 (68%), Gaps = 2/205 (0%)
 Frame = +1

Query: 19   SFVLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQF--HDPLLYRSTVGALQY 192
            + +L+Q++Y SE+++R  M +C    +P++   KL+ Y GE+    D   YRS VGALQY
Sbjct: 783  NILLNQERYASEIVKRVSMENCKSVGTPLSTVEKLSAYEGEKLGEKDATQYRSVVGALQY 842

Query: 193  LTLTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFAD 372
            LTLTRPDI+ +VNK+ QFL +P   HWA  KR+LRY+KGT   GL    SSS  + A++D
Sbjct: 843  LTLTRPDISFSVNKVCQFLQNPTTVHWATVKRILRYVKGTLGLGLKVEKSSSNIVSAYSD 902

Query: 373  ADYAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYL 552
            AD+A C+D++RST G  +F GSNL+ WNA+KQ  VSRSS EAEY++LANAT +++W+  L
Sbjct: 903  ADWADCLDDKRSTGGFAVFLGSNLISWNARKQATVSRSSTEAEYKALANATAEIMWVRKL 962

Query: 553  CCELGIPSSPPHQLWCDNTSAATFS 627
              ELGI    P QLWCDN  A   S
Sbjct: 963  LEELGISHPGPSQLWCDNIGATYLS 987


>emb|CAN68364.1| hypothetical protein VITISV_021899 [Vitis vinifera]
          Length = 431

 Score =  218 bits (554), Expect = 2e-54
 Identities = 111/204 (54%), Positives = 140/204 (68%)
 Frame = +1

Query: 1   VVQK*ASFVLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQFHDPLLYRSTVG 180
           V+   +S  LSQ KY+ + L+R G++     ASPMA    L+   G +  DP LYRS VG
Sbjct: 48  VLNSRSSLHLSQAKYICDFLQRAGLSESKSMASPMAAGPVLSIADGTRLEDPTLYRSLVG 107

Query: 181 ALQYLTLTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIE 360
           ALQY T+TRPDIA TVNKL QF+H+P + H    KR+LRYLKG+  +GL+F PSSSL + 
Sbjct: 108 ALQYCTITRPDIAYTVNKLCQFMHAPTSTHLQVVKRVLRYLKGSLFYGLSFQPSSSLDLI 167

Query: 361 AFADADYAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIW 540
           A+ DAD+A C D+RRST G+ IFFG NLV W+A KQ+VVSRSS E+EYR LANA  ++ W
Sbjct: 168 AYTDADWASCPDDRRSTSGYCIFFGGNLVSWSASKQKVVSRSSTESEYRGLANAAAELTW 227

Query: 541 LHYLCCELGIPSSPPHQLWCDNTS 612
           +  L  EL IP   P  L+CDN S
Sbjct: 228 IQSLLKELFIPLFQPPVLYCDNLS 251


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  216 bits (551), Expect = 4e-54
 Identities = 104/203 (51%), Positives = 142/203 (69%), Gaps = 2/203 (0%)
 Frame = +1

Query: 25   VLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQF--HDPLLYRSTVGALQYLT 198
            +L+Q+KY ++LL+R  M++C P ++P++++ KLT Y G     +D + YRS VGALQYLT
Sbjct: 1179 ILTQEKYANDLLKRVNMSNCKPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLT 1238

Query: 199  LTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFADAD 378
            LTRPDIA +VNK+ QFLH+P   HW A KR+LRYL    S GL    S+S  +  ++DAD
Sbjct: 1239 LTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILRYLNQCTSLGLHIHKSASTLVHGYSDAD 1298

Query: 379  YAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYLCC 558
            +AG ID+R+ST G  +F GSNLV W+A+KQ  VSRSS EAEY+++AN T ++IW+  L  
Sbjct: 1299 WAGSIDDRKSTGGFAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLK 1358

Query: 559  ELGIPSSPPHQLWCDNTSAATFS 627
            ELGI S    ++WCDN  A   S
Sbjct: 1359 ELGIESPKAAKIWCDNLGAKYLS 1381


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  216 bits (551), Expect = 4e-54
 Identities = 109/203 (53%), Positives = 139/203 (68%), Gaps = 2/203 (0%)
 Frame = +1

Query: 25   VLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQF--HDPLLYRSTVGALQYLT 198
            VLSQ  Y S++L+R GM+ C P ++P++   KL+   G+    +D   YRS VGALQYLT
Sbjct: 668  VLSQAWYASDILKRAGMSICKPASTPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYLT 727

Query: 199  LTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFADAD 378
            LTR D++  VNK+ QFLHSP   HW+A KR+LRY+KGT  FGL F  S S+ I AF+DAD
Sbjct: 728  LTRSDLSFLVNKVCQFLHSPTTVHWSAVKRILRYIKGTVEFGLRFGKSDSMLISAFSDAD 787

Query: 379  YAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYLCC 558
            +AGC D+RRST G  +F G NL+ W+A+KQ  VSRSS EAEY++LANATT+V W+  +  
Sbjct: 788  WAGCSDDRRSTGGFAVFLGPNLISWSARKQATVSRSSTEAEYKALANATTEVTWVRKILD 847

Query: 559  ELGIPSSPPHQLWCDNTSAATFS 627
            EL I      QLWCDN  A   S
Sbjct: 848  ELRIARPSVAQLWCDNLGATYLS 870


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  216 bits (549), Expect = 7e-54
 Identities = 103/199 (51%), Positives = 140/199 (70%), Gaps = 2/199 (1%)
 Frame = +1

Query: 25   VLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQF--HDPLLYRSTVGALQYLT 198
            VL+Q+KY  ++L+R  M+ C    +P++I+ KL+ + G  F   D   YRS VGALQYLT
Sbjct: 1164 VLTQEKYAMDVLKRVNMSDCKAVNTPLSISEKLSAHEGNPFGPEDSTRYRSLVGALQYLT 1223

Query: 199  LTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFADAD 378
            LTRPD++ +VNK+ Q+LH+P   HWAA KR+LRYLK T   GL  S S+SL + AF+DAD
Sbjct: 1224 LTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDAD 1283

Query: 379  YAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYLCC 558
            +AGC+D+R ST G  +F G NLV W+A+KQ  VSRSS EAEY++LAN T +++W+  L  
Sbjct: 1284 WAGCLDDRHSTGGFAVFIGPNLVSWSARKQATVSRSSTEAEYKALANVTAEIMWIQTLLH 1343

Query: 559  ELGIPSSPPHQLWCDNTSA 615
            ELGI +    ++WCDN  A
Sbjct: 1344 ELGIQAPKIAKVWCDNIGA 1362


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  215 bits (547), Expect = 1e-53
 Identities = 107/204 (52%), Positives = 139/204 (68%), Gaps = 2/204 (0%)
 Frame = +1

Query: 25   VLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQF--HDPLLYRSTVGALQYLT 198
            ++SQ+KY S+LL+R  M+ C   A+P++ + KL    G     +D   YRS VGALQYLT
Sbjct: 1165 LMSQEKYASDLLKRVNMSDCKSVATPLSASEKLIAGKGTILGPNDATQYRSIVGALQYLT 1224

Query: 199  LTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFADAD 378
            LTR DIA +VNK+ QFLH+P  +HWAA KR+LRY+K     GL    SSS+ +  ++DAD
Sbjct: 1225 LTRLDIAFSVNKVCQFLHNPTTEHWAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSDAD 1284

Query: 379  YAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYLCC 558
            +AGC+D+RRST G  ++ G NLV WNAKKQ  VSRSS EAEY++LANAT +++W+  L  
Sbjct: 1285 WAGCLDDRRSTGGFAVYLGDNLVSWNAKKQATVSRSSTEAEYKALANATAEIMWVQTLLQ 1344

Query: 559  ELGIPSSPPHQLWCDNTSAATFSF 630
            EL I S    QLWCDN  A   SF
Sbjct: 1345 ELNIVSPAMAQLWCDNMGAKYLSF 1368


>gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 352

 Score =  215 bits (547), Expect = 1e-53
 Identities = 107/204 (52%), Positives = 139/204 (68%), Gaps = 2/204 (0%)
 Frame = +1

Query: 25  VLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQF--HDPLLYRSTVGALQYLT 198
           ++SQ+KY S+LL+R  M+ C   A+P++ + KL    G     +D   YRS VGALQYLT
Sbjct: 80  LMSQEKYASDLLKRVNMSDCKSVATPLSASEKLIAGKGTILGPNDATQYRSIVGALQYLT 139

Query: 199 LTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFADAD 378
           LTR DIA +VNK+ QFLH+P  +HWAA KR+LRY+K     GL    SSS+ +  ++DAD
Sbjct: 140 LTRLDIAFSVNKVCQFLHNPTTEHWAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSDAD 199

Query: 379 YAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYLCC 558
           +AGC+D+RRST G  ++ G NLV WNAKKQ  VSRSS EAEY++LANAT +++W+  L  
Sbjct: 200 WAGCLDDRRSTGGFAVYLGDNLVSWNAKKQATVSRSSTEAEYKALANATAEIMWVQTLLQ 259

Query: 559 ELGIPSSPPHQLWCDNTSAATFSF 630
           EL I S    QLWCDN  A   SF
Sbjct: 260 ELNIVSPAMAQLWCDNMGAKYLSF 283


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
            gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
            Japonica Group]
          Length = 821

 Score =  214 bits (544), Expect = 3e-53
 Identities = 108/205 (52%), Positives = 141/205 (68%), Gaps = 4/205 (1%)
 Frame = +1

Query: 25   VLSQQKYLSELLERTGMNHCHPCASPMAINTKLT----TYVGEQFHDPLLYRSTVGALQY 192
            +LSQ+KY S+LL R GM  C P ++P++ + KL+    T +G Q  D   YRS VGALQY
Sbjct: 549  MLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQ--DSTQYRSVVGALQY 606

Query: 193  LTLTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFAD 372
            LTLTRPDI+ ++NK+ QFLH+P   HWAA KR+LRY+K T   GL F  + SL +  F+D
Sbjct: 607  LTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSD 666

Query: 373  ADYAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYL 552
            AD+AG  D+RRST G  +F G NLV W+A+KQ  VSRSS EAEY++LANAT +++W+  L
Sbjct: 667  ADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQTL 726

Query: 553  CCELGIPSSPPHQLWCDNTSAATFS 627
              ELG+ S    +LWCDN  A   S
Sbjct: 727  LQELGVESPRAAKLWCDNLGAKYLS 751


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  214 bits (544), Expect = 3e-53
 Identities = 105/203 (51%), Positives = 137/203 (67%), Gaps = 2/203 (0%)
 Frame = +1

Query: 25   VLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQF--HDPLLYRSTVGALQYLT 198
            VL+Q KY ++LL++ GM  C P  +P++++ KL+ + G      D   YRS VGALQYLT
Sbjct: 1187 VLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLT 1246

Query: 199  LTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFADAD 378
            LTRPDIA +VNK+ QFLH+P   HW A KR+LRYLK     GL    S S  +  F+DAD
Sbjct: 1247 LTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDAD 1306

Query: 379  YAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYLCC 558
            +AGC+D+RRST G  IF GSNLV WNA+KQ  VSRSS E+EY+++ANAT +++W+  L  
Sbjct: 1307 WAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLLA 1366

Query: 559  ELGIPSSPPHQLWCDNTSAATFS 627
            EL I S    ++WCDN  A   S
Sbjct: 1367 ELEIKSPKAAKIWCDNLGAKYLS 1389


>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  214 bits (544), Expect = 3e-53
 Identities = 105/203 (51%), Positives = 137/203 (67%), Gaps = 2/203 (0%)
 Frame = +1

Query: 25   VLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQF--HDPLLYRSTVGALQYLT 198
            VL+Q KY ++LL++ GM  C P  +P++++ KL+ + G      D   YRS VGALQYLT
Sbjct: 909  VLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLT 968

Query: 199  LTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFADAD 378
            LTRPDIA +VNK+ QFLH+P   HW A KR+LRYLK     GL    S S  +  F+DAD
Sbjct: 969  LTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDAD 1028

Query: 379  YAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYLCC 558
            +AGC+D+RRST G  IF GSNLV WNA+KQ  VSRSS E+EY+++ANAT +++W+  L  
Sbjct: 1029 WAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSTESEYKAIANATAEIMWVQTLLA 1088

Query: 559  ELGIPSSPPHQLWCDNTSAATFS 627
            EL I S    ++WCDN  A   S
Sbjct: 1089 ELEIKSPKAAKIWCDNLGAKYLS 1111


>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
          Length = 391

 Score =  213 bits (543), Expect = 4e-53
 Identities = 108/205 (52%), Positives = 141/205 (68%), Gaps = 4/205 (1%)
 Frame = +1

Query: 25  VLSQQKYLSELLERTGMNHCHPCASPMAINTKLT----TYVGEQFHDPLLYRSTVGALQY 192
           +LSQ+KY S+LL R GM  C P ++P++ + KL+    T +G Q  D   YRS VGALQY
Sbjct: 119 MLSQEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQ--DSTQYRSVVGALQY 176

Query: 193 LTLTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFAD 372
           LTLTRPDI+ ++NK+ QFLH+P   HWAA KR+LRY+K T   GL F  + SL +  F+D
Sbjct: 177 LTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSD 236

Query: 373 ADYAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYL 552
           AD+AG  D+RRST G  +F G NLV W+A+KQ  VSRSS EAEY++LANAT +++W+  L
Sbjct: 237 ADWAGSPDDRRSTGGFAVFLGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMWVQTL 296

Query: 553 CCELGIPSSPPHQLWCDNTSAATFS 627
             ELG+ S    +LWCDN  A   S
Sbjct: 297 LQELGVESPRAAKLWCDNLGAKYLS 321


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1478

 Score =  213 bits (543), Expect = 4e-53
 Identities = 105/203 (51%), Positives = 137/203 (67%), Gaps = 2/203 (0%)
 Frame = +1

Query: 25   VLSQQKYLSELLERTGMNHCHPCASPMAINTKLTTYVGEQF--HDPLLYRSTVGALQYLT 198
            VL+Q KY ++LL++ GM  C P  +P++++ KL+ + G      D   YRS VGALQYLT
Sbjct: 1180 VLNQDKYANDLLKKVGMIDCKPANTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLT 1239

Query: 199  LTRPDIALTVNKLSQFLHSPKADHWAACKRLLRYLKGTASFGLTFSPSSSLCIEAFADAD 378
            LTRPDIA +VNK+ QFLH+P   HW A KR+LRYLK     GL    S S  +  F+DAD
Sbjct: 1240 LTRPDIAFSVNKVCQFLHAPTTVHWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDAD 1299

Query: 379  YAGCIDNRRSTDGHFIFFGSNLVVWNAKKQQVVSRSSAEAEYRSLANATTDVIWLHYLCC 558
            +AGC+D+RRST G  IF GSNLV WNA+KQ  VSRSS E+EY+++ANAT +++W+  L  
Sbjct: 1300 WAGCLDDRRSTGGFAIFLGSNLVSWNARKQATVSRSSIESEYKAIANATAEIMWVQTLLA 1359

Query: 559  ELGIPSSPPHQLWCDNTSAATFS 627
            EL I S    ++WCDN  A   S
Sbjct: 1360 ELEIKSPKAAKIWCDNLGAKYLS 1382