BLASTX nr result
ID: Mentha24_contig00045160
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00045160
(331 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-16
emb|CBI23556.3| unnamed protein product [Vitis vinifera] 91 1e-16
ref|XP_007038997.1| Tetratricopeptide repeat-like superfamily pr... 89 6e-16
gb|EXC74714.1| hypothetical protein L484_000366 [Morus notabilis] 86 4e-15
gb|EXC31503.1| hypothetical protein L484_001299 [Morus notabilis] 86 4e-15
ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citr... 82 8e-14
ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi... 79 9e-13
ref|XP_002522011.1| pentatricopeptide repeat-containing protein,... 77 3e-12
ref|XP_004306045.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
gb|EPS60295.1| hypothetical protein M569_14504, partial [Genlise... 71 1e-10
ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 69 5e-10
ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-10
gb|EYU25211.1| hypothetical protein MIMGU_mgv1a001568mg [Mimulus... 67 3e-09
ref|XP_002321443.2| hypothetical protein POPTR_0015s02060g [Popu... 65 1e-08
ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arab... 64 2e-08
ref|XP_006290593.1| hypothetical protein CARUB_v10016682mg [Caps... 61 2e-07
ref|NP_190486.2| pentatricopeptide repeat-containing protein [Ar... 60 2e-07
emb|CAB66396.1| putative protein [Arabidopsis thaliana] 60 2e-07
>ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +3
Query: 129 SFESLKSRLIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKSCIRTRNFELGRAVH 308
+FE LK+RLI DVGR+ A STLDLM++ N PDLTTYS+LLKSCIR RNF+LG+ VH
Sbjct: 39 NFEPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVH 98
Query: 309 SKLTESG 329
KL +SG
Sbjct: 99 RKLMQSG 105
>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/67 (65%), Positives = 53/67 (79%)
Frame = +3
Query: 129 SFESLKSRLIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKSCIRTRNFELGRAVH 308
+FE LK+RLI DVGR+ A STLDLM++ N PDLTTYS+LLKSCIR RNF+LG+ VH
Sbjct: 8 NFEPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVH 67
Query: 309 SKLTESG 329
KL +SG
Sbjct: 68 RKLMQSG 74
>ref|XP_007038997.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508776242|gb|EOY23498.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 860
Score = 89.0 bits (219), Expect = 6e-16
Identities = 41/82 (50%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = +3
Query: 87 SRHKTSIAKPPDI--ISFESLKSRLIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLL 260
+R + ++A P I ++FE+L++RLI+H D G + +A+STLD+M+R N +PDL TYS+LL
Sbjct: 23 TRPRQTLAPPSVIRPVNFETLRNRLINHLDEGHLHKAVSTLDVMARQNTHPDLITYSLLL 82
Query: 261 KSCIRTRNFELGRAVHSKLTES 326
K+CIR+R+F+LG+ VH+ L +S
Sbjct: 83 KACIRSRDFQLGKIVHTNLNQS 104
>gb|EXC74714.1| hypothetical protein L484_000366 [Morus notabilis]
Length = 841
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = +3
Query: 117 PDIISFESLKSRLIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKSCIRTRNFELG 296
P +FE KSRLIH +VGR+ +AISTLDLM + +PDL +YS+LLKSCIR+RNFELG
Sbjct: 18 PKSFNFEPHKSRLIHDLNVGRLSKAISTLDLMVHNGAHPDLPSYSLLLKSCIRSRNFELG 77
Query: 297 RAVHSKLTES 326
+ VH+ L S
Sbjct: 78 KLVHAHLVNS 87
>gb|EXC31503.1| hypothetical protein L484_001299 [Morus notabilis]
Length = 348
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = +3
Query: 117 PDIISFESLKSRLIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKSCIRTRNFELG 296
P +FE KSRLIH +VGR+ +AISTLDLM + +PDL +YS+LLKSCIR+RNFELG
Sbjct: 18 PKSFNFEPHKSRLIHDLNVGRLSKAISTLDLMVHNGAHPDLPSYSLLLKSCIRSRNFELG 77
Query: 297 RAVHSKLTES 326
+ VH+ L S
Sbjct: 78 KLVHAHLVNS 87
>ref|XP_006422178.1| hypothetical protein CICLE_v10006927mg [Citrus clementina]
gi|568874825|ref|XP_006490514.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Citrus sinensis]
gi|557524051|gb|ESR35418.1| hypothetical protein
CICLE_v10006927mg [Citrus clementina]
Length = 861
Score = 82.0 bits (201), Expect = 8e-14
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = +3
Query: 135 ESLKSRLIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKSCIRTRNFELGRAVHSK 314
E L +RLI+H + GRV +AI TLDLM++ +PDL TYS+LLKSCIR+RNF LG+ VHS
Sbjct: 44 EPLSNRLIYHLNEGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSL 103
Query: 315 LTES 326
LT S
Sbjct: 104 LTRS 107
>ref|XP_006347856.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum tuberosum]
Length = 849
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +3
Query: 132 FESLKSRLIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKSCIRTRNFELGRAVHS 311
FE+LK LI A+VG + +AISTLD +S+ PDLT+Y+VLLKSCIRTRNF+ G+ +HS
Sbjct: 32 FEALKDTLIRQANVGNLKQAISTLDHISQMGFTPDLTSYTVLLKSCIRTRNFQFGQLLHS 91
Query: 312 KLTES 326
KL +S
Sbjct: 92 KLNDS 96
>ref|XP_004231236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Solanum lycopersicum]
Length = 844
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/65 (58%), Positives = 51/65 (78%)
Frame = +3
Query: 132 FESLKSRLIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKSCIRTRNFELGRAVHS 311
FE+LK LI A+ G + +AISTLD +S+ PDLT+Y+VLLKSCIRTRNF++G+ +HS
Sbjct: 27 FEALKDTLIRQANGGNLKQAISTLDQISQMGFNPDLTSYTVLLKSCIRTRNFQIGQLLHS 86
Query: 312 KLTES 326
KL +S
Sbjct: 87 KLNDS 91
>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 78.6 bits (192), Expect = 9e-13
Identities = 37/54 (68%), Positives = 44/54 (81%)
Frame = +3
Query: 168 DVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKSCIRTRNFELGRAVHSKLTESG 329
DVGR+ A STLDLM++ N PDLTTYS+LLKSCIR RNF+LG+ VH KL +SG
Sbjct: 3 DVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSG 56
>ref|XP_002522011.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538815|gb|EEF40415.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 585
Score = 77.0 bits (188), Expect = 3e-12
Identities = 35/64 (54%), Positives = 50/64 (78%)
Frame = +3
Query: 138 SLKSRLIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKSCIRTRNFELGRAVHSKL 317
SL +RLI+H G + +AI LD+M+++N +PDL TYS+LLKSCIR+ NF+ G+ VH+ L
Sbjct: 42 SLNTRLINHLKAGHLSKAIIALDVMTQNNTHPDLITYSLLLKSCIRSNNFQKGKLVHNCL 101
Query: 318 TESG 329
T+SG
Sbjct: 102 TQSG 105
>ref|XP_004306045.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 844
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/71 (50%), Positives = 50/71 (70%)
Frame = +3
Query: 114 PPDIISFESLKSRLIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKSCIRTRNFEL 293
PP ++ + L RLI +VG + +AISTLDLM+R +PDL TYS+LLKSC+R+R F L
Sbjct: 19 PPPPLTSDHLHRRLISQINVGHLPKAISTLDLMARRGSHPDLPTYSLLLKSCLRSRRFHL 78
Query: 294 GRAVHSKLTES 326
+ VH+ L+ S
Sbjct: 79 AKLVHAHLSRS 89
>gb|EPS60295.1| hypothetical protein M569_14504, partial [Genlisea aurea]
Length = 819
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/59 (62%), Positives = 43/59 (72%)
Frame = +3
Query: 153 LIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKSCIRTRNFELGRAVHSKLTESG 329
LI A+ G V+EA STLD M RS+ PD T ++VLLKSCIR R FELGR VHS + ESG
Sbjct: 1 LIRSAEDGCVEEAKSTLDFMLRSDFIPDRTVFTVLLKSCIRRRRFELGREVHSLVIESG 59
>ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/80 (45%), Positives = 50/80 (62%)
Frame = +3
Query: 87 SRHKTSIAKPPDIISFESLKSRLIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKS 266
S + +S + P + L RLI + GR+ +AISTL+ M +PDL TYS+ LK
Sbjct: 16 SSNPSSSLQFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKK 75
Query: 267 CIRTRNFELGRAVHSKLTES 326
CIRTR+F++G VH KLT+S
Sbjct: 76 CIRTRSFDIGTLVHEKLTQS 95
>ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/80 (45%), Positives = 50/80 (62%)
Frame = +3
Query: 87 SRHKTSIAKPPDIISFESLKSRLIHHADVGRVDEAISTLDLMSRSNLYPDLTTYSVLLKS 266
S + +S + P + L RLI + GR+ +AISTL+ M +PDL TYS+ LK
Sbjct: 16 SSNPSSSLQFPTFTNPNPLTGRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKK 75
Query: 267 CIRTRNFELGRAVHSKLTES 326
CIRTR+F++G VH KLT+S
Sbjct: 76 CIRTRSFDIGTLVHEKLTQS 95
>gb|EYU25211.1| hypothetical protein MIMGU_mgv1a001568mg [Mimulus guttatus]
Length = 794
Score = 67.0 bits (162), Expect = 3e-09
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +3
Query: 210 MSRSNLYPDLTTYSVLLKSCIRTRNFELGRAVHSKLTES 326
MSR+NL PDL TYSVLLKSCIRTRNFELG+ VHS+L ES
Sbjct: 1 MSRANLAPDLATYSVLLKSCIRTRNFELGQLVHSRLIES 39
>ref|XP_002321443.2| hypothetical protein POPTR_0015s02060g [Populus trichocarpa]
gi|550321785|gb|EEF05570.2| hypothetical protein
POPTR_0015s02060g [Populus trichocarpa]
Length = 931
Score = 65.1 bits (157), Expect = 1e-08
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +3
Query: 186 EAISTLDLMSRSNLYPDLTTYSVLLKSCIRTRNFELGRAVHSKLTESG 329
+AISTLD MS +PDL TYS+LLKSCIR+ N++LG VH +LT+SG
Sbjct: 131 KAISTLDQMSLQGTHPDLITYSLLLKSCIRSHNYQLGHLVHHRLTQSG 178
>ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata] gi|297323492|gb|EFH53913.1| hypothetical protein
ARALYDRAFT_323502 [Arabidopsis lyrata subsp. lyrata]
Length = 1112
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +3
Query: 96 KTSIAKPPDIISFESLKSRLI-HHADVGRVDEAISTLDLMSRSNLYP-DLTTYSVLLKSC 269
K I PP I + ++ RLI H + G + A+S LDLM+R + P D T+S LLKSC
Sbjct: 13 KLPIKSPPSISNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSC 72
Query: 270 IRTRNFELGRAVHSKLTE 323
IR R+F LG+ VH++L E
Sbjct: 73 IRARHFRLGKLVHARLIE 90
>ref|XP_006290593.1| hypothetical protein CARUB_v10016682mg [Capsella rubella]
gi|482559300|gb|EOA23491.1| hypothetical protein
CARUB_v10016682mg [Capsella rubella]
Length = 850
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +3
Query: 96 KTSIAKPPDIISFESLKSRLI-HHADVGRVDEAISTLDLMSRSNLYP-DLTTYSVLLKSC 269
K + P + + ++ RLI H + G + A+S LDLM+R + P D T+S LLKSC
Sbjct: 13 KLPVKSQPSVSNRINIADRLILRHLNAGDLRGAVSALDLMARDGIRPIDSVTFSSLLKSC 72
Query: 270 IRTRNFELGRAVHSKLTE 323
IR R+F LG+ VH++L E
Sbjct: 73 IRARDFRLGKLVHARLVE 90
>ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261
[Arabidopsis thaliana] gi|58013020|gb|AAW62963.1|
embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +3
Query: 96 KTSIAKPPDIISFESLKSRLI-HHADVGRVDEAISTLDLMSRSNLYP-DLTTYSVLLKSC 269
K I P + + ++ RLI H + G + A+S LDLM+R + P D T+S LLKSC
Sbjct: 13 KLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSC 72
Query: 270 IRTRNFELGRAVHSKLTE 323
IR R+F LG+ VH++L E
Sbjct: 73 IRARDFRLGKLVHARLIE 90
>emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +3
Query: 96 KTSIAKPPDIISFESLKSRLI-HHADVGRVDEAISTLDLMSRSNLYP-DLTTYSVLLKSC 269
K I P + + ++ RLI H + G + A+S LDLM+R + P D T+S LLKSC
Sbjct: 13 KLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSC 72
Query: 270 IRTRNFELGRAVHSKLTE 323
IR R+F LG+ VH++L E
Sbjct: 73 IRARDFRLGKLVHARLIE 90