BLASTX nr result

ID: Mentha24_contig00044774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00044774
         (361 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23741.3| unnamed protein product [Vitis vinifera]               72   8e-11
ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]    66   6e-09
ref|XP_004247938.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|XP_006340958.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_004297946.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
gb|EXB58833.1| hypothetical protein L484_002770 [Morus notabilis]      57   3e-06

>emb|CBI23741.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/75 (46%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
 Frame = -2

Query: 213 LTQHSLVAQKLIFSYCQFRRPFEGQLVFDSLLCKNTHVCNTLLSGYGKNHLFQESFDIFR 34
           L+Q+SL+A KLIF+Y   + P+  +LVFDSL  KN  + N+L++GY KN L+ E+F +F 
Sbjct: 54  LSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFN 113

Query: 33  KMCAC----SDFTFS 1
           +MC+      DFT S
Sbjct: 114 QMCSSDVLPDDFTLS 128


>ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Vitis vinifera]
          Length = 625

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/75 (46%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
 Frame = -2

Query: 213 LTQHSLVAQKLIFSYCQFRRPFEGQLVFDSLLCKNTHVCNTLLSGYGKNHLFQESFDIFR 34
           L+Q+SL+A KLIF+Y   + P+  +LVFDSL  KN  + N+L++GY KN L+ E+F +F 
Sbjct: 54  LSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFN 113

Query: 33  KMCAC----SDFTFS 1
           +MC+      DFT S
Sbjct: 114 QMCSSDVLPDDFTLS 128


>emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
          Length = 625

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
 Frame = -2

Query: 213 LTQHSLVAQKLIFSYCQFRRPFEGQLVFDSLLCKNTHVCNTLLSGYGKNHLFQESFDIFR 34
           L+Q+S +A KLIF+Y   + P+  +LVFDSL  KN  + N+L++G  KN L+ E+F +F 
Sbjct: 54  LSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFN 113

Query: 33  KMCAC----SDFTFS 1
           +MC+      DFT S
Sbjct: 114 QMCSSDVLPDDFTLS 128


>ref|XP_004247938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Solanum lycopersicum]
          Length = 632

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
 Frame = -2

Query: 213 LTQHSLVAQKLIFSYCQFRRPFEGQLVFDSLLCKNTHVCNTLLSGYGKNHLFQESFDIFR 34
           L Q+S++A KL+ +Y   + P + QLVFD+   K+ ++ N L++GY K+ LF ES  +F 
Sbjct: 56  LDQNSVIATKLVSAYFACQNPLDSQLVFDTFEHKSEYLWNILINGYAKSKLFGESIKLFN 115

Query: 33  KMCAC----SDFTFS 1
           +MC       +FTFS
Sbjct: 116 QMCKSEVTPDEFTFS 130


>ref|XP_006340958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Solanum tuberosum]
          Length = 632

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
 Frame = -2

Query: 213 LTQHSLVAQKLIFSYCQFRRPFEGQLVFDSLLCKNTHVCNTLLSGYGKNHLFQESFDIFR 34
           L Q+S++A KL+ +Y   + P + QLVFD+   K+ ++ N L++GY K+ LF +S  +F 
Sbjct: 56  LDQNSVIATKLVSAYFACQNPLDSQLVFDTFEHKSEYLWNILINGYAKSKLFGKSIKLFN 115

Query: 33  KMCAC----SDFTFS 1
           +MC       +FTFS
Sbjct: 116 QMCKTEVTPDEFTFS 130


>ref|XP_004297946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Fragaria vesca subsp. vesca]
          Length = 630

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
 Frame = -2

Query: 213 LTQHSLVAQKLIFSYCQFRRPFEGQLVFDSLLCKNTHVCNTLLSGYGKNHLFQESFDIFR 34
           L Q+  +A KLI +Y QF  P   +LVFDS+  KN ++ N+++S Y +  L  E+F +F 
Sbjct: 58  LHQNPFIATKLISAYAQFNHPTNSKLVFDSIHPKNVYLWNSMISAYVRTRLHNEAFSLFI 117

Query: 33  KM-CACS--DFTFS 1
           +M C+ S  +FTFS
Sbjct: 118 EMLCSASPDEFTFS 131


>gb|EXB58833.1| hypothetical protein L484_002770 [Morus notabilis]
          Length = 617

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/63 (42%), Positives = 43/63 (68%)
 Frame = -2

Query: 213 LTQHSLVAQKLIFSYCQFRRPFEGQLVFDSLLCKNTHVCNTLLSGYGKNHLFQESFDIFR 34
           L Q+  +A KLI +Y  F+ P   + VF+S   K+T++ N+L+SGY KN  + E+F++FR
Sbjct: 52  LNQNPFLATKLISAYATFKIPTCARFVFESNELKDTYLWNSLISGYVKNGGYSEAFELFR 111

Query: 33  KMC 25
           +MC
Sbjct: 112 EMC 114


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