BLASTX nr result

ID: Mentha24_contig00044092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00044092
         (383 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU36000.1| hypothetical protein MIMGU_mgv1a026812mg [Mimulus...    64   3e-17
gb|EXB73284.1| Double-stranded RNA-binding protein 1 [Morus nota...    47   6e-08

>gb|EYU36000.1| hypothetical protein MIMGU_mgv1a026812mg [Mimulus guttatus]
          Length = 301

 Score = 63.5 bits (153), Expect(2) = 3e-17
 Identities = 31/51 (60%), Positives = 38/51 (74%)
 Frame = +2

Query: 230 SYKILLNKLANDEGFFPPTYKTMRHDECESQSFSTTVEIKGEVFQGAAAKS 382
           SYKILL +LA+ EGFFPP Y T    +   Q+FS+TVE++GEVFQG  AKS
Sbjct: 164 SYKILLQELADKEGFFPPKYTTTVPRDSRIQTFSSTVEVEGEVFQGDTAKS 214



 Score = 50.4 bits (119), Expect(2) = 3e-17
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +1

Query: 4   HEGFKNKLRMCAQR*NLHQPAYCTIREGHCFKARVRVGEDWFTSNEL 144
           H+ FK KL++ A+  NL    Y   +EG C+KARV +GEDWF S +L
Sbjct: 87  HDEFKKKLQIYAKNKNLDLIVYRIEKEGGCYKARVSIGEDWFESEQL 133


>gb|EXB73284.1| Double-stranded RNA-binding protein 1 [Morus notabilis]
          Length = 467

 Score = 47.4 bits (111), Expect(2) = 6e-08
 Identities = 23/57 (40%), Positives = 33/57 (57%)
 Frame = +2

Query: 212 HFMRRTSYKILLNKLANDEGFFPPTYKTMRHDECESQSFSTTVEIKGEVFQGAAAKS 382
           +F + + YK  L +LA +E F  P YKT  +       F +TVE++GE+F G AA S
Sbjct: 196 NFQKASPYKNRLQELAQEECFCMPLYKTTNYGAPHKPIFKSTVELEGEIFHGKAASS 252



 Score = 35.0 bits (79), Expect(2) = 6e-08
 Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +1

Query: 1   MHEGFKNKLRMCAQR*NLHQPAY---CTIREGHCFKARVRVGEDWFTSNELF 147
           +H  +K +L+  AQR N+  P+Y   C      CFKA+V VGE  F S + F
Sbjct: 123 IHCQYKIQLQKYAQRKNIGLPSYSIECGGAHASCFKAKVLVGEHIFESLKFF 174


Top