BLASTX nr result

ID: Mentha24_contig00042996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00042996
         (415 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC35378.1| Zinc finger CCCH domain-containing protein 30 [Mo...    59   9e-07
ref|XP_007046728.1| Zinc finger C-x8-C-x5-C-x3-H type family pro...    57   3e-06
ref|NP_566947.1| zinc finger CCCH domain-containing protein 45 [...    57   3e-06
emb|CAB62640.1| hypothetical protein [Arabidopsis thaliana]            57   3e-06
ref|XP_007202902.1| hypothetical protein PRUPE_ppa016088mg, part...    55   8e-06

>gb|EXC35378.1| Zinc finger CCCH domain-containing protein 30 [Morus notabilis]
          Length = 505

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 23/147 (15%)
 Frame = +2

Query: 44  WLVXXXXXXXXXXXXKRRESALSEVVYTDLTAIPPCPFTSPVVEGECHDDTQTPIIPIEE 223
           WLV            K RE  + E VY   +AIP   + S   E E +D+++TPI+PI  
Sbjct: 100 WLVAAGEESEEVKHQKLREMRVLEAVYPRSSAIPHSSYVSLESENEYYDNSRTPIVPITP 159

Query: 224 VAEETPE---TPSDSSALENTSI--NPQPSA----DLPM----SECDPSQVHELGKSPP- 361
           + +E P    TPSD +   NT+   +P PS+     LP     S+C+ S +  LG S P 
Sbjct: 160 IEDEEPADTVTPSDVAPSVNTTTISSPPPSSLSQVSLPSESHPSKCNSSFLQSLGTSQPP 219

Query: 362 ---------NMLHETAAALNLKQKSTK 415
                    ++L  T+AAL    KS++
Sbjct: 220 LEKLPDRGADVLAATSAALATIMKSSE 246


>ref|XP_007046728.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative
           [Theobroma cacao] gi|508698989|gb|EOX90885.1| Zinc
           finger C-x8-C-x5-C-x3-H type family protein, putative
           [Theobroma cacao]
          Length = 515

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = +2

Query: 89  KRRESALSEVVYTDLTAIPPCPFTSPVVEGECHDDTQTPIIPIEEVA-EETPETPSDSSA 265
           K RE  + E VY  L+AIPP P  S  VE E HDD +TP++P+  +  EE  +  SD +A
Sbjct: 110 KLREMRVLEAVYPRLSAIPPSPSVSMDVEVEPHDDRRTPLVPLTPIEDEEGADVSSDFAA 169

Query: 266 LENTSINPQPSADLPMSECDPSQVHELGKSPPNMLHETA 382
              T  N Q +A +       S  H +   P + +   A
Sbjct: 170 QPKTLSNSQTAALIMPQGLSGSGTHSMPNCPSSAVKSPA 208


>ref|NP_566947.1| zinc finger CCCH domain-containing protein 45 [Arabidopsis
           thaliana] gi|75165186|sp|Q94C33.1|C3H45_ARATH RecName:
           Full=Zinc finger CCCH domain-containing protein 45;
           Short=AtC3H45 gi|14335012|gb|AAK59770.1|
           AT3g51180/F24M12_220 [Arabidopsis thaliana]
           gi|23308223|gb|AAN18081.1| At3g51180/F24M12_220
           [Arabidopsis thaliana] gi|332645239|gb|AEE78760.1|
           uncharacterized protein AT3G51180 [Arabidopsis thaliana]
          Length = 521

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
 Frame = +2

Query: 44  WLVXXXXXXXXXXXXKRRESALSEVVYTDLTAIPPCPFTSPVVEGECHDDTQTPII---P 214
           WLV              R S + E +Y   +AIP  P  SP VE EC DD++TP I   P
Sbjct: 90  WLVGCGGGSSEWQNENLRISKVLEAIYPHRSAIPSRPSVSPAVEAECFDDSKTPAIRLTP 149

Query: 215 IEEVAEETPETPSDSSALENTSINPQPSADLPMSECDPSQVHELGKSPPNMLHETAAALN 394
           IE+ +E + E  S+S      + N Q   +         QV  L    P++    +AAL 
Sbjct: 150 IEDESESSSEESSNSKVESGVTANKQGQLETKPLCSTQEQVSGLTGLAPDLSLAASAALT 209

Query: 395 LKQKS 409
              K+
Sbjct: 210 ALMKT 214


>emb|CAB62640.1| hypothetical protein [Arabidopsis thaliana]
          Length = 499

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
 Frame = +2

Query: 44  WLVXXXXXXXXXXXXKRRESALSEVVYTDLTAIPPCPFTSPVVEGECHDDTQTPII---P 214
           WLV              R S + E +Y   +AIP  P  SP VE EC DD++TP I   P
Sbjct: 68  WLVGCGGGSSEWQNENLRISKVLEAIYPHRSAIPSRPSVSPAVEAECFDDSKTPAIRLTP 127

Query: 215 IEEVAEETPETPSDSSALENTSINPQPSADLPMSECDPSQVHELGKSPPNMLHETAAALN 394
           IE+ +E + E  S+S      + N Q   +         QV  L    P++    +AAL 
Sbjct: 128 IEDESESSSEESSNSKVESGVTANKQGQLETKPLCSTQEQVSGLTGLAPDLSLAASAALT 187

Query: 395 LKQKS 409
              K+
Sbjct: 188 ALMKT 192


>ref|XP_007202902.1| hypothetical protein PRUPE_ppa016088mg, partial [Prunus persica]
           gi|462398433|gb|EMJ04101.1| hypothetical protein
           PRUPE_ppa016088mg, partial [Prunus persica]
          Length = 372

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 43/145 (29%), Positives = 61/145 (42%), Gaps = 19/145 (13%)
 Frame = +2

Query: 38  PGWLVXXXXXXXXXXXXKRRESALSEVVYTDLTAIPPCPFTSPVVEGECHDDTQTPIIPI 217
           P W V            K RE  + E VY   +AIPP P  S  VEGE +DD+ TP +P 
Sbjct: 88  PTWEVAAGEESEDAKAQKSREMRVLEAVYPRFSAIPPNPSVSLDVEGEHYDDSLTPFVPD 147

Query: 218 EEVAEETPETPSDSSALENTSINPQP---------SADLPMSECDPSQVHELGKSPP--- 361
             + EE+P+   D     NT++  QP         S     S+C+   + +L    P   
Sbjct: 148 TPIEEESPDL-LDLETPVNTNVGCQPPVLHQGLSASGKSNASKCNSPGLQQLASDQPVLG 206

Query: 362 -------NMLHETAAALNLKQKSTK 415
                  ++    +AAL    KST+
Sbjct: 207 NLFDLNADVTAAASAALTAIMKSTE 231


Top