BLASTX nr result
ID: Mentha24_contig00042758
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Mentha24_contig00042758
(488 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_004935358.1| ORF1 gene product [Actinidia virus B] gi|356... 131 8e-29
gb|AET36885.1| putative replicase, partial [Actinidia virus A] 131 1e-28
gb|ADE62745.1| replicase [Grapevine virus B] 110 3e-22
ref|NP_619654.1| putative replicase [Grapevine virus B] gi|10611... 107 2e-21
gb|ABU62819.1| replicase [Grapevine virus B] 106 3e-21
gb|AFV34758.1| replicase [Grapevine virus B] 106 4e-21
gb|ABG37965.1| putative replicase [Grapevine virus A] 65 7e-09
gb|ABH07008.1| putative replicase [Grapevine virus A] 64 2e-08
gb|ADG57798.1| replicase [Grapevine virus B] 62 6e-08
>ref|YP_004935358.1| ORF1 gene product [Actinidia virus B] gi|356711544|gb|AET36890.1|
putative replicase [Actinidia virus B]
Length = 1707
Score = 131 bits (330), Expect = 8e-29
Identities = 63/163 (38%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Frame = -1
Query: 488 RIQDTKLFDSMGNFRVKEGIWDSLCAALGDEVTYVFDKKKYDVANLERFIVRCEPAVLQI 309
++QD KL+DSMG F +KE +W+ C ALGD +TY+ DK++Y V+++E+FI+RC A + I
Sbjct: 358 QLQDAKLYDSMGTFNLKEAVWNGFCGALGDSITYLIDKEQYKVSSMEKFILRCSSARITI 417
Query: 308 PRYFRDRRNTKNSLVPELGASWSGESEIEWDDCYWANLLSMDCEPQPYALV-DEIIEPRL 132
R FRD + + L PELG SW+GE + E + Y + D E PY+L DEI++ +
Sbjct: 418 TRTFRDYQPRRTKLGPELGTSWTGEEDEELQEIYHVVVKEGDRERTPYSLKGDEILDNKE 477
Query: 131 VSHIGYIECARIIMAESCPPATELGKKVAITPVDDFMGLRSFI 3
I+CAR+ + E+ + + + +P+D F +R F+
Sbjct: 478 RRSDLMIQCARMDLLENTKELPSINEPMVFSPIDGFRSMRRFM 520
>gb|AET36885.1| putative replicase, partial [Actinidia virus A]
Length = 1714
Score = 131 bits (329), Expect = 1e-28
Identities = 66/163 (40%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Frame = -1
Query: 488 RIQDTKLFDSMGNFRVKEGIWDSLCAALGDEVTYVFDKKKYDVANLERFIVRCEPAVLQI 309
++Q+ KL+DSMG+F ++E IW+SLC ALGD +TY DK+KY + ++ERFI+ C A + I
Sbjct: 354 QLQEAKLYDSMGSFSLQEAIWNSLCGALGDSITYFMDKQKYKMMSMERFIMGCGSAKISI 413
Query: 308 PRYFRDRRNTKNSLVPELGASWSGESEIEWDDCYWANLLSMDCEPQPYAL-VDEIIEPRL 132
R FRD ++ L P +GASW+G + EW++ Y NL D Y L +EII +
Sbjct: 414 QREFRDFHAQRDKLCPVIGASWTGVEDPEWEEIYLRNLQEQDVPGTSYNLHGEEIINRKE 473
Query: 131 VSHIGYIECARIIMAESCPPATELGKKVAITPVDDFMGLRSFI 3
+ + CAR+ + + E+ +V I+P+D+F LR FI
Sbjct: 474 LRSDLMVFCARLDLINNTGTVEEMNIEVLISPLDNFKALRLFI 516
>gb|ADE62745.1| replicase [Grapevine virus B]
Length = 1709
Score = 110 bits (274), Expect = 3e-22
Identities = 59/160 (36%), Positives = 93/160 (58%), Gaps = 1/160 (0%)
Frame = -1
Query: 488 RIQDTKLFDSMGNFRVKEGIWDSLCAALGDEVTYVFDKKKYDVANLERFIVRCEPAVLQI 309
+IQ+TKL+D MGNF +KE IW ++ AA+GD + Y FDK ++ +LE FI+ C PA +++
Sbjct: 357 QIQETKLYDKMGNFSLKECIWSAVSAAMGDSLVYFFDKARFYNESLESFILNCGPAKIEV 416
Query: 308 PRYFRDRRNTKNSLVPELGASWSGESEIEWDDCYWANLLSMDCEPQPYALV-DEIIEPRL 132
R FR+ + + P L AS+ G + D+ Y N+ D +PY++ DE+I R
Sbjct: 417 KRVFREAVYRNHGVCPHL-ASFDGAHDCIIDELYLQNIRDQDRAREPYSIPRDEVIGNRN 475
Query: 131 VSHIGYIECARIIMAESCPPATELGKKVAITPVDDFMGLR 12
I IE R++ E+ ++V ++P+DDF LR
Sbjct: 476 SCRISLIEMGRVMHNFYQEMKVEINREVIVSPLDDFRALR 515
>ref|NP_619654.1| putative replicase [Grapevine virus B] gi|1061119|emb|CAA53196.1|
putative replicase [Grapevine virus B]
Length = 1707
Score = 107 bits (266), Expect = 2e-21
Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Frame = -1
Query: 488 RIQDTKLFDSMGNFRVKEGIWDSLCAALGDEVTYVFDKKKYDVANLERFIVRCEPAVLQI 309
+IQ+TKL+D MGNF +KE IW ++ +A+GD + Y FDK ++ +LE FI+ C PA ++I
Sbjct: 356 QIQETKLYDKMGNFSLKECIWSAVSSAMGDSLVYFFDKARFYNESLESFILNCGPAKIEI 415
Query: 308 PRYFRDRRNTKNSLVPELGASWSGESEIEWDDCYWANLLSMDCEPQPYALVD-EIIEPRL 132
R +RD + P L S+ G + D+ Y ++ MD +PY+L E++E +
Sbjct: 416 KRVYRDAVYRNQGVCPHL-VSFDGSPDGVMDELYLQHIRDMDRSSEPYSLTSAEVLESSI 474
Query: 131 VSHIGYIECARIIMAESCPPATELGKKVAITPVDDFMGLR 12
I IE R ++ + ++V ++P+DDF +R
Sbjct: 475 GCRISLIEMGRAMLKFHQQQDVMINERVVLSPLDDFRSMR 514
>gb|ABU62819.1| replicase [Grapevine virus B]
Length = 1709
Score = 106 bits (265), Expect = 3e-21
Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 1/160 (0%)
Frame = -1
Query: 488 RIQDTKLFDSMGNFRVKEGIWDSLCAALGDEVTYVFDKKKYDVANLERFIVRCEPAVLQI 309
+IQ+TKL+D MGNF +KE IW ++ AA+G+ + Y FDK ++ +LE FI+ C PA ++I
Sbjct: 357 QIQETKLYDKMGNFSLKECIWSAVSAAMGNSLVYFFDKARFYNESLESFILNCGPAKIEI 416
Query: 308 PRYFRDRRNTKNSLVPELGASWSGESEIEWDDCYWANLLSMDCEPQPYAL-VDEIIEPRL 132
R FR+ + P L S+ G + D+ Y N+ D +PY++ ++I R
Sbjct: 417 KRIFREAVYRNKGVCPHL-VSFDGAPDCVIDELYLQNIRDQDRAREPYSIPQSDVIGKRN 475
Query: 131 VSHIGYIECARIIMAESCPPATELGKKVAITPVDDFMGLR 12
I IE R++ E+ ++V ++P+DDF LR
Sbjct: 476 CCRISLIEMGRVVHRYHQERKVEINREVVVSPLDDFKALR 515
>gb|AFV34758.1| replicase [Grapevine virus B]
Length = 1709
Score = 106 bits (264), Expect = 4e-21
Identities = 56/160 (35%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Frame = -1
Query: 488 RIQDTKLFDSMGNFRVKEGIWDSLCAALGDEVTYVFDKKKYDVANLERFIVRCEPAVLQI 309
+IQ+TKL+D MGNF +KE IW ++ AA+GD + Y FDK ++ +LE FI+ C PA +++
Sbjct: 357 QIQETKLYDKMGNFSLKECIWSAVSAAMGDSLVYFFDKARFYNESLESFILNCGPAKIEV 416
Query: 308 PRYFRDRRNTKNSLVPELGASWSGESEIEWDDCYWANLLSMDCEPQPYAL-VDEIIEPRL 132
R FR+ N + P L AS+ G + D+ Y N+ D +PY++ E++ +
Sbjct: 417 KRVFREAVYRNNGVCPHL-ASFDGNPDCIIDELYLQNIRDQDRMREPYSIPKGELVNGQT 475
Query: 131 VSHIGYIECARIIMAESCPPATELGKKVAITPVDDFMGLR 12
I IE R + E+ ++V ++P+D+F LR
Sbjct: 476 RCRISLIEMGRAVHRFHQERKVEINREVIVSPLDNFKALR 515
>gb|ABG37965.1| putative replicase [Grapevine virus A]
Length = 1710
Score = 65.5 bits (158), Expect = 7e-09
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Frame = -1
Query: 488 RIQDTKLFDSMGNFRVKEGIWDSLCAALGDEVTYVFDKKKYDVANLERFIVRCEPAVLQI 309
+I+DT L+D MGN +K + ++ G+ T +F+K +YD LE+FI CE I
Sbjct: 356 QIKDTGLYDRMGNPSIKSLLSEAFHDIAGNLFTRLFNKPEYDARCLEKFIRACETTEFYI 415
Query: 308 PRYFRDRRNTKNSLVPELGASWSGESEIE-WDDCYWANLLSMDCEPQPY-ALVDEIIEPR 135
PR F +R +SL+ + W + E D+ L D EP+PY A V R
Sbjct: 416 PRRFMERVYRGSSLMVQRVVDWVEDEEANALDEVNLQELCKNDREPEPYSASVSNGENRR 475
Query: 134 LVSHIGYIECARIIMAESCPPATELGKKVAITPVDDFMGLRSFI 3
I I + ++ ES + E+ + V + + LR F+
Sbjct: 476 AYVPITRIMRSHALILESA-KSVEINRVVVVCSARSLLNLRLFL 518
>gb|ABH07008.1| putative replicase [Grapevine virus A]
Length = 1710
Score = 64.3 bits (155), Expect = 2e-08
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Frame = -1
Query: 488 RIQDTKLFDSMGNFRVKEGIWDSLCAALGDEVTYVFDKKKYDVANLERFIVRCEPAVLQI 309
+I+DT L+D MGN +K + ++ G+ T +F+K +YD LE+FI CE I
Sbjct: 356 QIKDTGLYDRMGNPSIKSLLSEAFHDIAGNLFTRLFNKPEYDARCLEKFIRACETTEFYI 415
Query: 308 PRYFRDRRNTKNSLVPELGASWSGESEIE-WDDCYWANLLSMDCEPQPY-ALVDEIIEPR 135
PR F +R +SL+ + W + E D+ L D P+PY ALV R
Sbjct: 416 PRKFMERVYRGSSLMVQRVVDWVEDEEANALDEVNLQELCKNDRNPEPYGALVLNGDNRR 475
Query: 134 LVSHIGYIECARIIMAESCPPATELGKKVAITPVDDFMGLRSFI 3
I I + ++ ES + E+ + V + + LR F+
Sbjct: 476 AYVPITRIMRSHALILESA-RSVEINRVVVVCSARSLLNLRMFL 518
>gb|ADG57798.1| replicase [Grapevine virus B]
Length = 243
Score = 62.4 bits (150), Expect = 6e-08
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Frame = -1
Query: 383 FDKKKYDVANLERFIVRCEPAVLQIPRYFRDRRNTKNSLVPELGASWSGESEIEWDDCYW 204
FDK ++ +LE FI+ C PA ++I R +RD + P L S+ G + D+ Y
Sbjct: 2 FDKARFYNESLESFILNCGPAKIEIKRVYRDAVYRNQGVCPHL-TSFDGSPDAVMDELYL 60
Query: 203 ANLLSMDCEPQPYALVD-EIIEPRLVSHIGYIECARIIMAESCPPATELGKKVAITPVDD 27
+ MD +PY+L E++ I IE R ++ + ++V ++P+DD
Sbjct: 61 QCIRDMDRCSEPYSLTSAEVLGGPTRCRISLIEMGREVLRYHQQQEVVINERVVLSPLDD 120
Query: 26 FMGLR 12
F G+R
Sbjct: 121 FKGMR 125