BLASTX nr result

ID: Mentha24_contig00042111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00042111
         (615 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymera...    45   3e-06
ref|XP_007022430.1| Uncharacterized protein TCM_032871 [Theobrom...    51   3e-06
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212...    57   4e-06
gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana]                 47   6e-06
emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]    49   9e-06
emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]    49   9e-06
gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]              47   9e-06

>gb|ABE88110.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
            [Medicago truncatula]
          Length = 1654

 Score = 45.4 bits (106), Expect(2) = 3e-06
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = -2

Query: 89   VVRNKARLVAK*YCQAEGIDYEETFSPIA 3
            V RNKARLVA+ Y Q EGIDY ETF+P+A
Sbjct: 1204 VTRNKARLVAQGYSQQEGIDYTETFAPVA 1232



 Score = 32.0 bits (71), Expect(2) = 3e-06
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 159  KAFQINFFHTKWVFRNKTDEKSQ 91
            K FQ N   TKWVFRNK +E+ +
Sbjct: 1181 KPFQKNIIGTKWVFRNKQNEQGE 1203


>ref|XP_007022430.1| Uncharacterized protein TCM_032871 [Theobroma cacao]
           gi|508722058|gb|EOY13955.1| Uncharacterized protein
           TCM_032871 [Theobroma cacao]
          Length = 332

 Score = 51.2 bits (121), Expect(2) = 3e-06
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = -2

Query: 92  NVVRNKARLVAK*YCQAEGIDYEETFSPIA 3
           NVVRNKARLVAK Y Q EGIDY+ETF+P+A
Sbjct: 43  NVVRNKARLVAKGYNQEEGIDYDETFAPVA 72



 Score = 26.2 bits (56), Expect(2) = 3e-06
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 132 TKWVFRNKTDEK 97
           TKW+FRNK DE+
Sbjct: 30  TKWLFRNKVDEQ 41


>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 28/62 (45%), Positives = 38/62 (61%)
 Frame = -2

Query: 188  QRKREGRTQARPSK*ISFTPNGFSETRRMKNHNVVRNKARLVAK*YCQAEGIDYEETFSP 9
            +R +  +   RPS             +  +N N++RNKARLVA+ YCQ EGIDYEETF+P
Sbjct: 1665 ERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAP 1724

Query: 8    IA 3
            +A
Sbjct: 1725 VA 1726


>gb|AAF18630.1|AC006228_1 F5J5.1 [Arabidopsis thaliana]
          Length = 1463

 Score = 46.6 bits (109), Expect(2) = 6e-06
 Identities = 20/30 (66%), Positives = 26/30 (86%)
 Frame = -2

Query: 92   NVVRNKARLVAK*YCQAEGIDYEETFSPIA 3
            NV RN+ARLVA+ Y Q EGID++ETF+P+A
Sbjct: 1068 NVTRNRARLVAQGYSQVEGIDFDETFAPVA 1097



 Score = 29.6 bits (65), Expect(2) = 6e-06
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -1

Query: 147  INFFHTKWVFRNKTDEK 97
            +N   TKW+F+NKTDE+
Sbjct: 1050 VNVVGTKWIFKNKTDEE 1066


>emb|CAN74951.1| hypothetical protein VITISV_030567 [Vitis vinifera]
          Length = 2203

 Score = 48.9 bits (115), Expect(2) = 9e-06
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -2

Query: 101  KNHNVVRNKARLVAK*YCQAEGIDYEETFSPIA 3
            +N  +VRNKARLVA+ Y Q EGIDYEETF+P+A
Sbjct: 1428 ENGIIVRNKARLVAQGYNQEEGIDYEETFAPVA 1460



 Score = 26.6 bits (57), Expect(2) = 9e-06
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 132  TKWVFRNKTDE 100
            TKWVFRNK DE
Sbjct: 1418 TKWVFRNKMDE 1428


>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
          Length = 1885

 Score = 48.9 bits (115), Expect(2) = 9e-06
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -2

Query: 101  KNHNVVRNKARLVAK*YCQAEGIDYEETFSPIA 3
            +N  +VRNKARLVA+ Y Q EGIDYEETF+P+A
Sbjct: 1016 ENGIIVRNKARLVAQGYNQEEGIDYEETFAPVA 1048



 Score = 26.6 bits (57), Expect(2) = 9e-06
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -1

Query: 132  TKWVFRNKTDE 100
            TKWVFRNK DE
Sbjct: 1006 TKWVFRNKMDE 1016


>gb|AAG52949.1| gag/pol polyprotein [Arabidopsis thaliana]
          Length = 1643

 Score = 46.6 bits (109), Expect(2) = 9e-06
 Identities = 19/30 (63%), Positives = 26/30 (86%)
 Frame = -2

Query: 92   NVVRNKARLVAK*YCQAEGIDYEETFSPIA 3
            N+ RNKARLVA+ Y Q EG+D++ETF+P+A
Sbjct: 1193 NITRNKARLVAQGYTQVEGLDFDETFAPVA 1222



 Score = 28.9 bits (63), Expect(2) = 9e-06
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 150  QINFFHTKWVFRNKTDE 100
            Q+N   TKW+F+NK DE
Sbjct: 1174 QVNVIGTKWIFKNKFDE 1190


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