BLASTX nr result

ID: Mentha24_contig00041920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00041920
         (538 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU36000.1| hypothetical protein MIMGU_mgv1a026812mg [Mimulus...   100   2e-19
ref|XP_006446420.1| hypothetical protein CICLE_v10018273mg [Citr...    90   4e-16
ref|XP_004228877.1| PREDICTED: double-stranded RNA-binding prote...    78   2e-12
ref|XP_003601344.1| Double-stranded RNA binding protein [Medicag...    71   2e-10
ref|XP_007015564.1| Ribonuclease 3, putative [Theobroma cacao] g...    70   2e-10
ref|XP_006364497.1| PREDICTED: uncharacterized protein LOC102590...    66   5e-09
ref|XP_004296266.1| PREDICTED: uncharacterized protein LOC101296...    60   3e-07
ref|XP_002313634.2| hypothetical protein POPTR_0009s15500g [Popu...    60   3e-07
ref|XP_004170549.1| PREDICTED: double-stranded RNA-binding prote...    56   5e-06
gb|EXB73284.1| Double-stranded RNA-binding protein 1 [Morus nota...    56   6e-06
ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222...    56   6e-06

>gb|EYU36000.1| hypothetical protein MIMGU_mgv1a026812mg [Mimulus guttatus]
          Length = 301

 Score =  100 bits (249), Expect = 2e-19
 Identities = 63/144 (43%), Positives = 81/144 (56%)
 Frame = -3

Query: 536 TVEIKGEVFQGAAAKSEKLAELNSAKAAYTALIERKLFEPRDQIIKLGGRFDSCGISDPT 357
           TVE++GEVFQG  AKS+KLAELN+AKAAYT   ER+  E                     
Sbjct: 199 TVEVEGEVFQGDTAKSKKLAELNAAKAAYTVFTERESEE--------------------- 237

Query: 356 CLSPSSLIADTKHETDQVQGTIVGNEESNFMSKAIFPEMKGYLLSNRVRVFTCMPNMALP 177
                 ++  T   T          +++N        E++ YLL NRV+VFT +PNMALP
Sbjct: 238 ------IVYRTPDSTT--------TKKTN--------EIESYLLCNRVKVFTSIPNMALP 275

Query: 176 KGEVVLPISEDKWAVVALEFPNEK 105
           +G VVLPISE++W VV LEFP+EK
Sbjct: 276 RGTVVLPISENRWTVVNLEFPSEK 299


>ref|XP_006446420.1| hypothetical protein CICLE_v10018273mg [Citrus clementina]
           gi|557549031|gb|ESR59660.1| hypothetical protein
           CICLE_v10018273mg [Citrus clementina]
          Length = 364

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 60/148 (40%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
 Frame = -3

Query: 533 VEIKGEVFQGAAAKSEKLAELNSAKAAYTALIERKLFEPRDQI---IKLGGRFDSCGISD 363
           VE+ GEVF G A +++K AE+ +AK AYTALIER        I   +K  G  +S   SD
Sbjct: 215 VEVDGEVFYGKAGRTKKKAEMKAAKVAYTALIERGRSCSIGSITHTVKADGVPNSTLSSD 274

Query: 362 --PTCLSPSSLIADTKHETDQVQGTIVGNEESNFMSKAIFPEMKGYLLSNRVRVFTCMPN 189
             P    P S            +  +     S+ M+         YLL NRVRV+T +P+
Sbjct: 275 LDPCFDVPPSPKRCLSSSLPMTELDVSALSISDSMAAKRATVTSSYLLCNRVRVYTRIPD 334

Query: 188 MALPKGEVVLPISEDKWAVVALEFPNEK 105
           +A PKG  ++PISEDKW  V+LEFPNE+
Sbjct: 335 IAFPKGITLMPISEDKWVAVSLEFPNEE 362


>ref|XP_004228877.1| PREDICTED: double-stranded RNA-binding protein 1-like [Solanum
           lycopersicum]
          Length = 441

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 66/198 (33%), Positives = 87/198 (43%), Gaps = 54/198 (27%)
 Frame = -3

Query: 536 TVEIKGEVFQGAAAKSEKLAELNSAKAAYTALIERKLF----------EPRDQIIKLGGR 387
           +VEI+ E+F G  AKS+K AE N+AK AYTAL + K            E   +I+K    
Sbjct: 247 SVEIEAEIFHGDGAKSKKQAEENAAKVAYTALTKCKSIYAGNPSTVSAESEGEIVKTERI 306

Query: 386 FDSCGI---------------SDPTCLSPSSLIADTKHETDQVQGT-------------- 294
            +S  I               S  T  SP S+ AD  + +    G               
Sbjct: 307 MESLSIFISEEKFRDEEEIVYSKST--SPKSIGADIVNASSLTLGVQELSVNEKTPSSVE 364

Query: 293 ---------------IVGNEESNFMSKAIFPEMKGYLLSNRVRVFTCMPNMALPKGEVVL 159
                           V N +S+    A   E + YLLSNR+RV+  +P+  LP G  VL
Sbjct: 365 SLLHLPSKTTPSKSPTVSNADSSARRTA---ETESYLLSNRIRVYKSIPDGVLPTGTTVL 421

Query: 158 PISEDKWAVVALEFPNEK 105
           PI+EDKW+VV LEF  EK
Sbjct: 422 PIAEDKWSVVRLEFLTEK 439


>ref|XP_003601344.1| Double-stranded RNA binding protein [Medicago truncatula]
           gi|355490392|gb|AES71595.1| Double-stranded RNA binding
           protein [Medicago truncatula]
          Length = 372

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 16/157 (10%)
 Frame = -3

Query: 536 TVEIKGEVFQGAAAKSEKLAELNSAKAAYTALIERKLFEPRDQIIKLGGR------FDSC 375
           TVE++G  F G A+KS+  AE ++AK AY  L E       D    +G +       +S 
Sbjct: 215 TVEVEGIGFHGKASKSKNKAEEDAAKIAYITLKECGSHTYADLSSSIGEKQAVKSTHESH 274

Query: 374 GISDPTCLSP---SSLIADTKHETDQVQGTIVGNEESNF-------MSKAIFPEMKGYLL 225
            +     L P     L+ D    TD      + NE           +SKA  P    Y+L
Sbjct: 275 IVKSKPKLKPVPEDELLYDEILPTDFQVNNGIQNESLPLPPNKKMKISKAKTPNTNSYML 334

Query: 224 SNRVRVFTCMPNMALPKGEVVLPISEDKWAVVALEFP 114
            N+++V+T  P++  P+G  V+PI EDKW   +LEFP
Sbjct: 335 GNKLKVYTSFPDIVFPEGITVVPIGEDKWIAASLEFP 371


>ref|XP_007015564.1| Ribonuclease 3, putative [Theobroma cacao]
           gi|508785927|gb|EOY33183.1| Ribonuclease 3, putative
           [Theobroma cacao]
          Length = 368

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 41/93 (44%), Positives = 52/93 (55%)
 Frame = -3

Query: 380 SCGISDPTCLSPSSLIADTKHETDQVQGTIVGNEESNFMSKAIFPEMKGYLLSNRVRVFT 201
           SC  S P     S L   + H    +  + +   +SN M K   P    YLL+NR RV+ 
Sbjct: 282 SCSKSVPVSAKESLLSTTSMH----LDISALSISDSN-MKKG--PGSSSYLLNNRFRVYR 334

Query: 200 CMPNMALPKGEVVLPISEDKWAVVALEFPNEKE 102
           C P++A PKG  VLPISED W  V+LEFPNEK+
Sbjct: 335 CFPDIAFPKGITVLPISEDSWVAVSLEFPNEKD 367


>ref|XP_006364497.1| PREDICTED: uncharacterized protein LOC102590741 [Solanum tuberosum]
          Length = 186

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = -3

Query: 245 EMKGYLLSNRVRVFTCMPNMALPKGEVVLPISEDKWAVVALEFPNEK 105
           E K YLLSNR RV+  +P+  LP G +VLPI+EDKWAVV+LEF NEK
Sbjct: 138 ETKSYLLSNRFRVYKSIPDGVLPTGTIVLPIAEDKWAVVSLEFLNEK 184


>ref|XP_004296266.1| PREDICTED: uncharacterized protein LOC101296761 [Fragaria vesca
           subsp. vesca]
          Length = 384

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 27/46 (58%), Positives = 34/46 (73%)
 Frame = -3

Query: 242 MKGYLLSNRVRVFTCMPNMALPKGEVVLPISEDKWAVVALEFPNEK 105
           +K YLL NR RV+T  P++A PK   +LPIS+DKW  V LEFPNE+
Sbjct: 337 LKSYLLCNRFRVYTQFPDIAFPKCITMLPISDDKWVAVRLEFPNEE 382


>ref|XP_002313634.2| hypothetical protein POPTR_0009s15500g [Populus trichocarpa]
           gi|550331796|gb|EEE87589.2| hypothetical protein
           POPTR_0009s15500g [Populus trichocarpa]
          Length = 484

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 25/45 (55%), Positives = 35/45 (77%)
 Frame = -3

Query: 239 KGYLLSNRVRVFTCMPNMALPKGEVVLPISEDKWAVVALEFPNEK 105
           + YLL NRVRV+ C P++ALP G  V+PIS+++W  V+LEFP E+
Sbjct: 438 RSYLLCNRVRVYPCYPDIALPNGITVMPISDNQWVAVSLEFPMEQ 482


>ref|XP_004170549.1| PREDICTED: double-stranded RNA-binding protein 4-like [Cucumis
           sativus]
          Length = 247

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
 Frame = -3

Query: 536 TVEIKGEVFQGAAAKSEKLAELNSAKAAYTALIERKLFEPRDQIIKLGGRFDSCGISDPT 357
           TV++  E F+G  ++++K AE+++AK AY  + E        Q I    R  SC ++   
Sbjct: 119 TVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGS------QSISTRKRAPSCDLA--- 169

Query: 356 CLSPSSLIADTKHETDQVQGTIVGNEESNFMSKAIFPEMKGYLLSNRVRVFTC--MPNMA 183
            L     IA + H   Q        +  +++S+ I   ++    S+  R+F C   PNM 
Sbjct: 170 -LEVPRDIATSSHNVAQP------GQSKDYVSR-IVSRLEAGKSSSSKRIFVCPRQPNMT 221

Query: 182 LPKGEVVLPISEDKWAVVALE 120
           +PK   VLPIS+D+W   + E
Sbjct: 222 IPKESSVLPISDDQWVAFSFE 242


>gb|EXB73284.1| Double-stranded RNA-binding protein 1 [Morus notabilis]
          Length = 467

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/44 (54%), Positives = 30/44 (68%)
 Frame = -3

Query: 233 YLLSNRVRVFTCMPNMALPKGEVVLPISEDKWAVVALEFPNEKE 102
           YLL N+VRV+   PN A PKG  V+PI    W  ++LEFPNEK+
Sbjct: 420 YLLCNKVRVYQEFPNHAFPKGITVMPIGNHNWVAISLEFPNEKK 463


>ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222879 [Cucumis sativus]
          Length = 446

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
 Frame = -3

Query: 536 TVEIKGEVFQGAAAKSEKLAELNSAKAAYTALIERKLFEPRDQIIKLGGRFDSCGISDPT 357
           TV++  E F+G  ++++K AE+++AK AY  + E        Q I    R  SC ++   
Sbjct: 318 TVKVGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGS------QSISTRKRAPSCDLA--- 368

Query: 356 CLSPSSLIADTKHETDQVQGTIVGNEESNFMSKAIFPEMKGYLLSNRVRVFTC--MPNMA 183
            L     IA + H   Q        +  +++S+ I   ++    S+  R+F C   PNM 
Sbjct: 369 -LEIPRDIATSSHNVAQP------GQSKDYVSR-IVSRLEAGKSSSSKRIFVCPRQPNMT 420

Query: 182 LPKGEVVLPISEDKWAVVALE 120
           +PK   VLPIS+D+W   + E
Sbjct: 421 IPKESSVLPISDDQWVAFSFE 441


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