BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00041136
         (339 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc...   146   3e-33
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc...   144   1e-32
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   144   2e-32
gb|AGQ44775.1| general transcription factor [Camellia sinensis]       142   4e-32
gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus...   136   3e-30
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr...   131   1e-28
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr...   131   1e-28
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc...   130   1e-28
ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc...   129   5e-28
ref|NP_175971.3| probable RNA polymerase II transcription factor...   125   5e-27
ref|XP_002310512.2| transcription factor-related family protein ...   124   2e-26
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab...   122   7e-26
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps...   121   1e-25
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A...   119   4e-25
ref|XP_002307021.1| transcription factor-related family protein ...   115   6e-24
ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transc...   114   1e-23
ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prun...   114   2e-23
ref|XP_007144178.1| hypothetical protein PHAVU_007G134900g [Phas...   113   2e-23
ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutr...   112   4e-23
ref|XP_003591640.1| General transcription factor IIH subunit [Me...   112   7e-23

>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Solanum tuberosum]
          Length = 599

 Score =  146 bits (368), Expect = 3e-33
 Identities = 70/89 (78%), Positives = 79/89 (88%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELLK FWSSYP+TT+Y Y KV R+KD MS+IYPKLQE+KESVQSD RHQVSLLV PML
Sbjct: 511 IQELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPML 570

Query: 159 QALDAAFAHYDADVQKRASKSGTRHNGLV 73
           QALDAAFAHYDAD+QKR++KSG R NG V
Sbjct: 571 QALDAAFAHYDADIQKRSAKSGERPNGFV 599


>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Solanum lycopersicum]
          Length = 599

 Score =  144 bits (363), Expect = 1e-32
 Identities = 69/89 (77%), Positives = 79/89 (88%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELLK FWSSYP+TT+Y Y KV R+KD MS+IYPKLQE+KESVQSD RHQVSLLV PML
Sbjct: 511 IQELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPML 570

Query: 159 QALDAAFAHYDADVQKRASKSGTRHNGLV 73
           QALDAAFAHYDAD+QKR+++SG R NG V
Sbjct: 571 QALDAAFAHYDADLQKRSARSGERPNGFV 599


>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score =  144 bits (362), Expect = 2e-32
 Identities = 69/89 (77%), Positives = 78/89 (87%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELL+ FWSSYP+TT YLY K  R+KD MS+IYPKLQE+KESVQSDFRHQVSLLV PML
Sbjct: 514 IQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPML 573

Query: 159 QALDAAFAHYDADVQKRASKSGTRHNGLV 73
           QALDAAFAHYDAD QKR+++SG R NG V
Sbjct: 574 QALDAAFAHYDADQQKRSARSGERPNGFV 602


>gb|AGQ44775.1| general transcription factor [Camellia sinensis]
          Length = 340

 Score =  142 bits (359), Expect = 4e-32
 Identities = 70/89 (78%), Positives = 78/89 (87%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELLK FWSSYP+TT YLY KV R+KD MS+IYPKLQE+KESVQSDFRHQVSLLV PML
Sbjct: 252 IQELLKHFWSSYPITTSYLYVKVGRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPML 311

Query: 159 QALDAAFAHYDADVQKRASKSGTRHNGLV 73
           QALDAAFA YDAD+QKR++K G R NG V
Sbjct: 312 QALDAAFARYDADLQKRSAKGGDRTNGYV 340


>gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus guttatus]
          Length = 409

 Score =  136 bits (343), Expect = 3e-30
 Identities = 66/80 (82%), Positives = 74/80 (92%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           VQELLK FWSSYP+TT+YLY KV R+KD MS+IY KLQE+KESV SDFRHQVSLLVHPML
Sbjct: 329 VQELLKHFWSSYPITTKYLYTKVTRMKDAMSQIYLKLQEIKESVPSDFRHQVSLLVHPML 388

Query: 159 QALDAAFAHYDADVQKRASK 100
           QALDAAFAHYDADVQ+R++K
Sbjct: 389 QALDAAFAHYDADVQRRSTK 408


>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
           gi|557555944|gb|ESR65958.1| hypothetical protein
           CICLE_v10007802mg [Citrus clementina]
          Length = 564

 Score =  131 bits (329), Expect = 1e-28
 Identities = 62/89 (69%), Positives = 74/89 (83%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELLK FWSSYP+TT YLY KV R+KD +S IYP+L+EMKES+ +D RHQVSLLV PM 
Sbjct: 476 IQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQ 535

Query: 159 QALDAAFAHYDADVQKRASKSGTRHNGLV 73
           QALDAA  HYDAD+QKR++KSG + NG V
Sbjct: 536 QALDAAIQHYDADLQKRSAKSGEKPNGYV 564


>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
           gi|557555943|gb|ESR65957.1| hypothetical protein
           CICLE_v10007802mg [Citrus clementina]
          Length = 597

 Score =  131 bits (329), Expect = 1e-28
 Identities = 62/89 (69%), Positives = 74/89 (83%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELLK FWSSYP+TT YLY KV R+KD +S IYP+L+EMKES+ +D RHQVSLLV PM 
Sbjct: 509 IQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQ 568

Query: 159 QALDAAFAHYDADVQKRASKSGTRHNGLV 73
           QALDAA  HYDAD+QKR++KSG + NG V
Sbjct: 569 QALDAAIQHYDADLQKRSAKSGEKPNGYV 597


>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Citrus sinensis]
          Length = 597

 Score =  130 bits (328), Expect = 1e-28
 Identities = 61/89 (68%), Positives = 74/89 (83%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELLK FWSSYP+TT YLY KV R+KD +S IYP+L+EMKES+ +D RHQVSLLV PM 
Sbjct: 509 IQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPADLRHQVSLLVRPMQ 568

Query: 159 QALDAAFAHYDADVQKRASKSGTRHNGLV 73
           QALDAA  HYDAD+QKR++KSG + NG +
Sbjct: 569 QALDAAIQHYDADLQKRSAKSGEKPNGYI 597


>ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Cucumis sativus]
          Length = 729

 Score =  129 bits (323), Expect = 5e-28
 Identities = 62/87 (71%), Positives = 74/87 (85%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELLK FWSSYP+TT YLY KV R+KD M+KIY +L+E+KE+V +DFRHQVSLLV PM 
Sbjct: 641 IQELLKHFWSSYPITTSYLYTKVSRLKDAMAKIYRQLEEIKETVVADFRHQVSLLVRPMH 700

Query: 159 QALDAAFAHYDADVQKRASKSGTRHNG 79
           QALDAAF H+DAD+QKR+ KSG R NG
Sbjct: 701 QALDAAFQHHDADMQKRSVKSGERLNG 727


>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
           [Arabidopsis thaliana]
           gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
           Full=Probable RNA polymerase II transcription factor B
           subunit 1-1; AltName: Full=General transcription and DNA
           repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
           Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332195172|gb|AEE33293.1| probable RNA polymerase II
           transcription factor B subunit 1-1 [Arabidopsis
           thaliana]
          Length = 591

 Score =  125 bits (315), Expect = 5e-27
 Identities = 61/89 (68%), Positives = 71/89 (79%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELLK FWSSYP+TT YL+ KV ++KD MS  Y KL+ MKESVQSD RHQVSLLV PM 
Sbjct: 503 IQELLKHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQ 562

Query: 159 QALDAAFAHYDADVQKRASKSGTRHNGLV 73
           QALDAAF HY+ D+Q+R +KSG R NG V
Sbjct: 563 QALDAAFHHYEVDLQRRTAKSGERPNGYV 591


>ref|XP_002310512.2| transcription factor-related family protein [Populus trichocarpa]
           gi|550334091|gb|EEE90962.2| transcription factor-related
           family protein [Populus trichocarpa]
          Length = 603

 Score =  124 bits (310), Expect = 2e-26
 Identities = 59/87 (67%), Positives = 73/87 (83%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELLK +WSSYP+TT YLY KV R+KD MSKI  +LQE+KESVQSD RHQV+LL+ PM 
Sbjct: 515 LQELLKHYWSSYPITTTYLYTKVSRLKDAMSKIDSQLQELKESVQSDLRHQVTLLLRPMQ 574

Query: 159 QALDAAFAHYDADVQKRASKSGTRHNG 79
           QAL+AA  HYDA++QKR+++SG R NG
Sbjct: 575 QALEAAMQHYDAELQKRSARSGDRSNG 601


>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
           lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
           ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
          Length = 592

 Score =  122 bits (305), Expect = 7e-26
 Identities = 61/90 (67%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELL+ FWSSYP+TT YL+ KV ++KD MS  Y KL+ MKESVQSD RHQVSLLV PM 
Sbjct: 503 IQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQVSLLVRPMQ 562

Query: 159 QALDAAFAHYDADVQKRASKS-GTRHNGLV 73
           QALDAAF HY+AD+Q+R +KS G R NG V
Sbjct: 563 QALDAAFQHYEADLQRRTAKSGGERPNGYV 592


>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
           gi|482575779|gb|EOA39966.1| hypothetical protein
           CARUB_v10008654mg [Capsella rubella]
          Length = 593

 Score =  121 bits (303), Expect = 1e-25
 Identities = 60/91 (65%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELL+ FWSSYP+TT YL+ KV ++KD MS  Y KL+ MKESVQSD RHQ+SLLV PM 
Sbjct: 503 IQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDLRHQISLLVRPMQ 562

Query: 159 QALDAAFAHYDADVQKRASKS--GTRHNGLV 73
           QALDAAF HY+AD+Q+R +KS  G R NG V
Sbjct: 563 QALDAAFQHYEADLQRRTAKSSGGERPNGYV 593


>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
           gi|548861733|gb|ERN19104.1| hypothetical protein
           AMTR_s00061p00135540 [Amborella trichopoda]
          Length = 626

 Score =  119 bits (298), Expect = 4e-25
 Identities = 57/81 (70%), Positives = 70/81 (86%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELL+ FWSSYPLTT +L+ KV RVKD M++IY KL E+KESVQS+FRHQVSLLV PML
Sbjct: 518 IQELLRHFWSSYPLTTTFLHAKVNRVKDAMAQIYRKLPEVKESVQSEFRHQVSLLVKPML 577

Query: 159 QALDAAFAHYDADVQKRASKS 97
           Q LD AF HYDA++QKR++K+
Sbjct: 578 QVLDEAFKHYDAEMQKRSTKT 598


>ref|XP_002307021.1| transcription factor-related family protein [Populus trichocarpa]
           gi|222856470|gb|EEE94017.1| transcription factor-related
           family protein [Populus trichocarpa]
          Length = 586

 Score =  115 bits (288), Expect = 6e-24
 Identities = 54/79 (68%), Positives = 67/79 (84%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELL+ +WSSYP+TT YLY+KV R+KD MSKI  +LQE+KESVQSD RHQV+LL+ PM 
Sbjct: 508 LQELLRHYWSSYPITTMYLYNKVSRLKDAMSKIDSQLQELKESVQSDLRHQVTLLIRPMQ 567

Query: 159 QALDAAFAHYDADVQKRAS 103
           QAL+ A  HYDAD+QKR+S
Sbjct: 568 QALEVAMQHYDADMQKRSS 586


>ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Cicer arietinum]
          Length = 586

 Score =  114 bits (285), Expect = 1e-23
 Identities = 57/88 (64%), Positives = 71/88 (80%)
 Frame = -1

Query: 336 QELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQ 157
           QELL+ FWSSYP+TTQ L +K  R+KD +S+IY KL+E+K S +SD RHQVSL+VHPM Q
Sbjct: 500 QELLRHFWSSYPVTTQNLVNKTKRMKDAISQIYSKLEEIKVSAKSDLRHQVSLVVHPMQQ 559

Query: 156 ALDAAFAHYDADVQKRASKSGTRHNGLV 73
           ALDAA  HYDADV+KR ++ GT+ NG V
Sbjct: 560 ALDAALLHYDADVRKRNAR-GTKPNGYV 586


>ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
           gi|462419824|gb|EMJ24087.1| hypothetical protein
           PRUPE_ppa003591mg [Prunus persica]
          Length = 563

 Score =  114 bits (284), Expect = 2e-23
 Identities = 57/82 (69%), Positives = 69/82 (84%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELL+ FWSSYP+TT YL  KV R+KD MS+IY +L+E+K   QSDFRHQVSLLV PM 
Sbjct: 477 IQELLRHFWSSYPITTTYLSTKVGRLKDAMSQIYRQLEEIK---QSDFRHQVSLLVRPMH 533

Query: 159 QALDAAFAHYDADVQKRASKSG 94
           QALDAAF H+DAD+QKRA++SG
Sbjct: 534 QALDAAFQHFDADLQKRAARSG 555


>ref|XP_007144178.1| hypothetical protein PHAVU_007G134900g [Phaseolus vulgaris]
           gi|561017368|gb|ESW16172.1| hypothetical protein
           PHAVU_007G134900g [Phaseolus vulgaris]
          Length = 588

 Score =  113 bits (283), Expect = 2e-23
 Identities = 55/88 (62%), Positives = 71/88 (80%)
 Frame = -1

Query: 336 QELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQ 157
           QELL+ +WSSYP+TTQ L +K  R+KD +S+IY KL+E+K S QSD RHQVSL+VHPM Q
Sbjct: 502 QELLRHYWSSYPVTTQNLVNKTRRLKDSISQIYSKLEEIKVSAQSDLRHQVSLVVHPMQQ 561

Query: 156 ALDAAFAHYDADVQKRASKSGTRHNGLV 73
           ALDAA  HYDAD++KR ++ G++ NG V
Sbjct: 562 ALDAALLHYDADIRKRNAR-GSKSNGYV 588


>ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutrema salsugineum]
           gi|557089185|gb|ESQ29893.1| hypothetical protein
           EUTSA_v10011333mg [Eutrema salsugineum]
          Length = 597

 Score =  112 bits (281), Expect = 4e-23
 Identities = 53/81 (65%), Positives = 65/81 (80%)
 Frame = -1

Query: 339 VQELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPML 160
           +QELL+ FWSSYP+TT YL+ KV ++KD MS  Y +L  MK+SVQSD RHQVSLLV PM 
Sbjct: 504 IQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSQLDAMKQSVQSDLRHQVSLLVRPMQ 563

Query: 159 QALDAAFAHYDADVQKRASKS 97
           QALDAAF HY+ D+Q+R +KS
Sbjct: 564 QALDAAFQHYETDLQRRTAKS 584


>ref|XP_003591640.1| General transcription factor IIH subunit [Medicago truncatula]
           gi|355480688|gb|AES61891.1| General transcription factor
           IIH subunit [Medicago truncatula]
          Length = 586

 Score =  112 bits (279), Expect = 7e-23
 Identities = 55/88 (62%), Positives = 69/88 (78%)
 Frame = -1

Query: 336 QELLKQFWSSYPLTTQYLYDKVIRVKDHMSKIYPKLQEMKESVQSDFRHQVSLLVHPMLQ 157
           QELL+ FWSSYP+T Q L DK  R+KD +S+IY KL+E+K S +SD RHQVSL+VHPM Q
Sbjct: 500 QELLRHFWSSYPVTKQSLVDKARRLKDAISQIYSKLEEIKVSAKSDLRHQVSLVVHPMQQ 559

Query: 156 ALDAAFAHYDADVQKRASKSGTRHNGLV 73
           ALDAA  HYDAD+ +R +K G++ NG V
Sbjct: 560 ALDAALLHYDADITRRNAK-GSKRNGYV 586