BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00040965
         (390 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006376484.1| hypothetical protein POPTR_0013s13420g, part...   115   6e-24
ref|XP_006391822.1| hypothetical protein EUTSA_v10023344mg [Eutr...   113   3e-23
ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...   112   4e-23
ref|XP_006384120.1| hypothetical protein POPTR_0004s07290g [Popu...   112   5e-23
ref|XP_007029261.1| Tetratricopeptide repeat-like superfamily pr...   112   7e-23
ref|XP_006382123.1| hypothetical protein POPTR_0006s28580g [Popu...   111   1e-22
emb|CBI34156.3| unnamed protein product [Vitis vinifera]              111   1e-22
ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat...   111   1e-22
emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]   111   1e-22
ref|XP_007031097.1| ATP binding,nucleic acid binding,helicases, ...   110   2e-22
ref|XP_004295757.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
ref|XP_006376536.1| hypothetical protein POPTR_0013s14620g, part...   108   6e-22
ref|XP_007029247.1| ATP binding,nucleic acid binding,helicases, ...   108   8e-22
gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]            108   8e-22
ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containi...   108   8e-22
ref|NP_172730.3| RNA processing factor1 [Arabidopsis thaliana] g...   108   8e-22
emb|CAR70004.1| pentatricopeptide repeat(PPR)-containing protein...   108   8e-22
sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide...   108   8e-22
emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]   108   8e-22
ref|XP_006391807.1| hypothetical protein EUTSA_v10023351mg [Eutr...   107   1e-21

>ref|XP_006376484.1| hypothetical protein POPTR_0013s13420g, partial [Populus
           trichocarpa] gi|550325760|gb|ERP54281.1| hypothetical
           protein POPTR_0013s13420g, partial [Populus trichocarpa]
          Length = 450

 Score =  115 bits (288), Expect = 6e-24
 Identities = 53/122 (43%), Positives = 78/122 (63%)
 Frame = +1

Query: 25  SIRDLDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCY 204
           S  ++DD +A  +DM+   PRPS  DF +LLS  ++M+++   +    EM L     N +
Sbjct: 8   SFSNIDDGLAFFNDMLSKNPRPSTYDFNQLLSAAMRMKKHETVVSLSKEMELRGVKHNVF 67

Query: 205 TLNIAINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDM 384
           TL I INCFC + R DFGF++ G+ +K GF+PDVVT  TL+ G    GK+G+A KL+ DM
Sbjct: 68  TLTILINCFCHLNRVDFGFSVWGKILKRGFEPDVVTSTTLVNGLCKEGKMGEAVKLVDDM 127

Query: 385 ID 390
           ++
Sbjct: 128 VE 129


>ref|XP_006391822.1| hypothetical protein EUTSA_v10023344mg [Eutrema salsugineum]
           gi|557088328|gb|ESQ29108.1| hypothetical protein
           EUTSA_v10023344mg [Eutrema salsugineum]
          Length = 633

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/118 (46%), Positives = 77/118 (65%)
 Frame = +1

Query: 37  LDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNI 216
           LDDAI L  +MV+ +P PS VDF+KLLS + KM+++   +    +M +   P N YT NI
Sbjct: 65  LDDAIVLFGEMVKSRPFPSIVDFSKLLSAIAKMKKFDVVISLGEKMEMLRIPHNLYTYNI 124

Query: 217 AINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMID 390
            INCFCR  +    FAILG+ +KLG++PD+VTFN+L+ GF    +I  A  LL  M++
Sbjct: 125 LINCFCRSSQLSSAFAILGKMMKLGYEPDLVTFNSLLNGFCHGNRISDAVSLLDQMVE 182



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 39/118 (33%), Positives = 58/118 (49%)
 Frame = +1

Query: 37  LDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNI 216
           +D A+ L   +   + +P+ V +  ++  + K R    AL  F EM       N  T N 
Sbjct: 240 MDLALNLLKKLEAEKIKPNVVIYNTVIDGLCKYRDVNEALDLFNEMENKGIKPNVITYNS 299

Query: 217 AINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMID 390
            I+C C   R      +L   IK   +PDVVTFN LI   +  GK+ +AE+L K+MI+
Sbjct: 300 LISCLCNYGRWSDTSRLLSDMIKRKLNPDVVTFNALIDALVKEGKLLEAEELYKEMIE 357


>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  112 bits (281), Expect = 4e-23
 Identities = 53/120 (44%), Positives = 77/120 (64%)
 Frame = +1

Query: 25  SIRDLDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCY 204
           ++  +DDA++L + M+RM+P PS VDF+KLL+ + +M+ Y   L  + +M  +  P N Y
Sbjct: 31  NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90

Query: 205 TLNIAINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDM 384
           TLNI IN FC + R  F F++LG  +KLG+ P   TF TLI+G    GKIG+A +L   M
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150


>ref|XP_006384120.1| hypothetical protein POPTR_0004s07290g [Populus trichocarpa]
           gi|550340522|gb|ERP61917.1| hypothetical protein
           POPTR_0004s07290g [Populus trichocarpa]
          Length = 539

 Score =  112 bits (280), Expect = 5e-23
 Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
 Frame = +1

Query: 16  DFGSIRDLDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFT-EMLLWNAP 192
           D    R++DDA++  + M+  +P P  + F KLLS +VKMRQY  A+   + +M L    
Sbjct: 17  DASLFRNIDDALSCFNHMLHRKPLPCIIQFNKLLSAIVKMRQYYDAVISLSKQMELAGLS 76

Query: 193 VNCYTLNIAINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKL 372
            N YTLN+ INCFC+++R D GF++L + IKLG  P +VTFNTL  G   VGK  +A +L
Sbjct: 77  PNTYTLNMLINCFCQLQRIDLGFSVLAKGIKLGLQPTIVTFNTLTNGLCKVGKFSQAAEL 136

Query: 373 LKDMI 387
             DM+
Sbjct: 137 FDDMV 141


>ref|XP_007029261.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           1 [Theobroma cacao] gi|508717866|gb|EOY09763.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 618

 Score =  112 bits (279), Expect = 7e-23
 Identities = 51/118 (43%), Positives = 76/118 (64%)
 Frame = +1

Query: 34  DLDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLN 213
           ++DDA+   + MV M PRPS + F +L+  +V+M+ YP AL    +M L     +  TLN
Sbjct: 73  NIDDALNKFYQMVGMHPRPSVMKFDQLVGAIVRMKHYPTALSLIRQMELLGIHPDVCTLN 132

Query: 214 IAINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMI 387
           I++NCFCR+ R DFGF++ G+ +KLG  P +VTF TLI G    G++ +A +L  DM+
Sbjct: 133 ISLNCFCRLHRLDFGFSVFGKMLKLGIQPSIVTFFTLINGLCIGGEVAQAVRLFNDMV 190



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/115 (27%), Positives = 59/115 (51%)
 Frame = +1

Query: 43  DAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNIAI 222
           +A+ L  +M      P+ V +  L+  +    Q+    +   EM+  N   +  T NI +
Sbjct: 251 EALKLFSEMKGKGIPPTVVTYNSLIHAMCNSCQWKVVTRLLNEMVANNCKPDVVTYNILV 310

Query: 223 NCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMI 387
           +  C+  R      I+ R I+LGF+PD+ T+N+L+ G+   G++ +A KLL  ++
Sbjct: 311 DALCKGGRVLEAQDIIERMIQLGFEPDMFTYNSLMNGYCGRGEMDEARKLLNFLV 365


>ref|XP_006382123.1| hypothetical protein POPTR_0006s28580g [Populus trichocarpa]
           gi|550337275|gb|ERP59920.1| hypothetical protein
           POPTR_0006s28580g [Populus trichocarpa]
          Length = 567

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/122 (44%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
 Frame = +1

Query: 25  SIRDLDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEML-LWNAPVNC 201
           S R++DDA+A  + M+  +P P  + FTKLLS +VKM QY   +   ++ + L     N 
Sbjct: 45  SFRNIDDALASFNHMIHRKPLPCIIQFTKLLSAIVKMGQYYDVVISLSKQMGLAGLSSNT 104

Query: 202 YTLNIAINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKD 381
           YTL+I +NCFC+++R D GF++L + IKLG  P +VTFNTLI G   VG+  +A +L  D
Sbjct: 105 YTLHILMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFNTLINGLCKVGEFAQAVELFDD 164

Query: 382 MI 387
           M+
Sbjct: 165 MV 166



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/114 (28%), Positives = 54/114 (47%)
 Frame = +1

Query: 43  DAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNIAI 222
           +A+ +   M  M   P+ V +  L+       Q   A + F  M+        ++ NI I
Sbjct: 297 EALGVLKTMTEMGVEPNVVTYNSLMYGYSSCTQVVEARKLFDVMITKGFKPVVFSYNILI 356

Query: 223 NCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDM 384
           N +C+ KR D    +    I  G  P+ VT+NTLI G   +G++ +A+ L ++M
Sbjct: 357 NGYCKAKRIDEAKQLFNEMIHQGLTPNKVTYNTLIHGLCQLGRVREAQDLFRNM 410


>emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  111 bits (277), Expect = 1e-22
 Identities = 55/118 (46%), Positives = 72/118 (61%)
 Frame = +1

Query: 37  LDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNI 216
           LDDA++  + ++ M P PS VDF KLL+ + KM+ Y   L   T+M  +  P N YTLNI
Sbjct: 26  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85

Query: 217 AINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMID 390
            IN FC + R  F F++L + +KLG  PD  TF TLI+G    GKIG+A  L   MID
Sbjct: 86  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 143


>ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  111 bits (277), Expect = 1e-22
 Identities = 55/118 (46%), Positives = 72/118 (61%)
 Frame = +1

Query: 37  LDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNI 216
           LDDA++  + ++ M P PS VDF KLL+ + KM+ Y   L   T+M  +  P N YTLNI
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 217 AINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMID 390
            IN FC + R  F F++L + +KLG  PD  TF TLI+G    GKIG+A  L   MID
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 154


>emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  111 bits (277), Expect = 1e-22
 Identities = 55/118 (46%), Positives = 72/118 (61%)
 Frame = +1

Query: 37  LDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNI 216
           LDDA++  + ++ M P PS VDF KLL+ + KM+ Y   L   T+M  +  P N YTLNI
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 217 AINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMID 390
            IN FC + R  F F++L + +KLG  PD  TF TLI+G    GKIG+A  L   MID
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMID 163


>ref|XP_007031097.1| ATP binding,nucleic acid binding,helicases, putative [Theobroma
           cacao] gi|508719702|gb|EOY11599.1| ATP binding,nucleic
           acid binding,helicases, putative [Theobroma cacao]
          Length = 632

 Score =  110 bits (275), Expect = 2e-22
 Identities = 50/117 (42%), Positives = 78/117 (66%)
 Frame = +1

Query: 37  LDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNI 216
           ++DA+ L + M+   PRPS V+FT++L  +V+M+ Y  A+    +M L     + YTL+I
Sbjct: 87  IEDALDLFNHMLHTYPRPSIVEFTQVLGAIVRMKHYETAISLLRQMDLVGIRHDVYTLSI 146

Query: 217 AINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMI 387
            +NCFCR++ +DFGF++LG+ +KLG  PD  TFNTL+ GF   GKI +A  L  +++
Sbjct: 147 LVNCFCRLRCSDFGFSLLGKMLKLGIQPDTTTFNTLVNGFCFEGKIAEAVILFDEIV 203


>ref|XP_004295757.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 439

 Score =  109 bits (273), Expect = 3e-22
 Identities = 50/120 (41%), Positives = 77/120 (64%)
 Frame = +1

Query: 28  IRDLDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYT 207
           + ++DDA+ L  +M++ +P PS V FT++L+ +VK++ YP  L   ++MLL     N YT
Sbjct: 63  VSNVDDALKLFDEMLQRRPLPSVVRFTQVLAPLVKLKHYPTVLSLNSQMLLSGIRPNHYT 122

Query: 208 LNIAINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMI 387
           L I INC+CR+ R D+  ++L  F KLG  PDV TFNTLI GF+   ++  A ++   M+
Sbjct: 123 LAIVINCYCRLNRMDYALSVLAHFFKLGLQPDVTTFNTLINGFVLRNRVANAARVFSKMV 182


>ref|XP_006376536.1| hypothetical protein POPTR_0013s14620g, partial [Populus
           trichocarpa] gi|550325854|gb|ERP54333.1| hypothetical
           protein POPTR_0013s14620g, partial [Populus trichocarpa]
          Length = 557

 Score =  108 bits (271), Expect = 6e-22
 Identities = 54/121 (44%), Positives = 78/121 (64%)
 Frame = +1

Query: 25  SIRDLDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCY 204
           S  +++DA++  + M+ +QP+PS V F+KLLS VV+MR Y   +    +M L     N Y
Sbjct: 40  SFSNINDALSAFNHMLHLQPQPSIVQFSKLLSAVVRMRYYETVVFLSKQMELAGISHNVY 99

Query: 205 TLNIAINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDM 384
           T NI INCFC +  AD GF++L + IKLGF+P VVTF+TL+ G    G+I +A +   DM
Sbjct: 100 TFNILINCFCHL-HADSGFSVLAKIIKLGFEPSVVTFSTLVNGLCIEGRIARAVEFFNDM 158

Query: 385 I 387
           +
Sbjct: 159 V 159


>ref|XP_007029247.1| ATP binding,nucleic acid binding,helicases, putative [Theobroma
           cacao] gi|508717852|gb|EOY09749.1| ATP binding,nucleic
           acid binding,helicases, putative [Theobroma cacao]
          Length = 626

 Score =  108 bits (270), Expect = 8e-22
 Identities = 49/118 (41%), Positives = 75/118 (63%)
 Frame = +1

Query: 34  DLDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLN 213
           ++ +A+ L + M+   PRPS ++F++LL  VV+++ Y  A+    +M L     N YTL 
Sbjct: 80  NIGEALTLFNRMIHSHPRPSIIEFSRLLGAVVRIKDYVTAVSLIRQMELLGIQHNVYTLT 139

Query: 214 IAINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMI 387
           I INCFC ++  DFGF++LG+  KLG  P+V+TF+TLI G   V K+ +A  L  DM+
Sbjct: 140 ILINCFCHLQCVDFGFSLLGKMFKLGLQPNVITFSTLINGLCIVSKVARAVMLFNDMV 197


>gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  108 bits (270), Expect = 8e-22
 Identities = 51/117 (43%), Positives = 75/117 (64%)
 Frame = +1

Query: 40  DDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNIA 219
           DDAIAL  +M+R +P PS VDF++  S + + +Q+   L    ++ L     N YTLNI 
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 220 INCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMID 390
           INCFCR  +  F +++LG+ +KLG++PD  TFNTLIKG    GK+ +A  L+  M++
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 176



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 32/115 (27%), Positives = 55/115 (47%)
 Frame = +1

Query: 40  DDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNIA 219
           +D   L  DMV  +  P+ + F  LL V VK  +   A + + EM+      N  T N  
Sbjct: 270 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 329

Query: 220 INCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDM 384
           ++ +C   R      +L   ++    PD+VTF +LIKG+  V ++    K+ +++
Sbjct: 330 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 384


>ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  108 bits (270), Expect = 8e-22
 Identities = 54/117 (46%), Positives = 73/117 (62%)
 Frame = +1

Query: 37  LDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNI 216
           LDDA++  + M+ M P PS VDFTKLL+ + KM+ Y   L   T+M  +  P + YTLNI
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 217 AINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMI 387
            IN FC ++R  + F++L + +KLG  PD  TFNTLI+G    GKIG+A  L    I
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 247



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
 Frame = +1

Query: 49  IALCHDMVRMQPR----PSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNI 216
           IA+ HD+V M  +    P  V +T L+       +   A++ F  M+      N  + NI
Sbjct: 376 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 435

Query: 217 AINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMI 387
            IN +C+++R D    +L +    G   D VT+NTLI G   VG++  A  L  +M+
Sbjct: 436 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 492


>ref|NP_172730.3| RNA processing factor1 [Arabidopsis thaliana]
           gi|332190794|gb|AEE28915.1| RNA processing factor1
           [Arabidopsis thaliana]
          Length = 735

 Score =  108 bits (270), Expect = 8e-22
 Identities = 51/117 (43%), Positives = 75/117 (64%)
 Frame = +1

Query: 40  DDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNIA 219
           DDAIAL  +M+R +P PS VDF++  S + + +Q+   L    ++ L     N YTLNI 
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 220 INCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMID 390
           INCFCR  +  F +++LG+ +KLG++PD  TFNTLIKG    GK+ +A  L+  M++
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 32/115 (27%), Positives = 55/115 (47%)
 Frame = +1

Query: 40  DDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNIA 219
           +D   L  DMV  +  P+ + F  LL V VK  +   A + + EM+      N  T N  
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339

Query: 220 INCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDM 384
           ++ +C   R      +L   ++    PD+VTF +LIKG+  V ++    K+ +++
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394


>emb|CAR70004.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 278

 Score =  108 bits (270), Expect = 8e-22
 Identities = 51/117 (43%), Positives = 75/117 (64%)
 Frame = +1

Query: 40  DDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNIA 219
           DDAIAL  +M+R +P PS VDF++  S + + +Q+   L    ++ L     N YTLNI 
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 220 INCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMID 390
           INCFCR  +  F +++LG+ +KLG++PD  TFNTLIKG    GK+ +A  L+  M++
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186


>sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  108 bits (270), Expect = 8e-22
 Identities = 51/117 (43%), Positives = 75/117 (64%)
 Frame = +1

Query: 40  DDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNIA 219
           DDAIAL  +M+R +P PS VDF++  S + + +Q+   L    ++ L     N YTLNI 
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 220 INCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMID 390
           INCFCR  +  F +++LG+ +KLG++PD  TFNTLIKG    GK+ +A  L+  M++
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE 186



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 32/115 (27%), Positives = 55/115 (47%)
 Frame = +1

Query: 40  DDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNIA 219
           +D   L  DMV  +  P+ + F  LL V VK  +   A + + EM+      N  T N  
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339

Query: 220 INCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDM 384
           ++ +C   R      +L   ++    PD+VTF +LIKG+  V ++    K+ +++
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394


>emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  108 bits (270), Expect = 8e-22
 Identities = 54/117 (46%), Positives = 73/117 (62%)
 Frame = +1

Query: 37  LDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNI 216
           LDDA++  + M+ M P PS VDFTKLL+ + KM+ Y   L   T+M  +  P + YTLNI
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 217 AINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMI 387
            IN FC ++R  + F++L + +KLG  PD  TFNTLI+G    GKIG+A  L    I
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
 Frame = +1

Query: 49  IALCHDMVRMQPR----PSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNI 216
           IA+ HD+V M  +    P  V +T L+       +   A++ F  M+      N  + NI
Sbjct: 338 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 397

Query: 217 AINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMI 387
            IN +C+++R D    +L +    G   D VT+NTLI G   VG++  A  L  +M+
Sbjct: 398 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 454


>ref|XP_006391807.1| hypothetical protein EUTSA_v10023351mg [Eutrema salsugineum]
           gi|557088313|gb|ESQ29093.1| hypothetical protein
           EUTSA_v10023351mg [Eutrema salsugineum]
          Length = 624

 Score =  107 bits (268), Expect = 1e-21
 Identities = 51/118 (43%), Positives = 76/118 (64%)
 Frame = +1

Query: 37  LDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNI 216
           LDDAI L  +MV+ +P PS ++F+KLLS + KM++Y   +    +M +   P N YT NI
Sbjct: 56  LDDAIVLFGEMVKSRPFPSIIEFSKLLSAIAKMKKYDVVISLGEKMEMLRIPHNLYTYNI 115

Query: 217 AINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMID 390
            INCFCR  +   G AILG+ +KLG++PD+VT ++L+ G+    +I  A  LL  M++
Sbjct: 116 LINCFCRSSQLSHGLAILGKMMKLGYEPDIVTLSSLLNGYCHGNRISDAIALLDQMVE 173



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/118 (33%), Positives = 60/118 (50%)
 Frame = +1

Query: 34  DLDDAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLN 213
           ++D A+ L   + + + +P+ V ++ ++  + K R    AL  F EM       N  T N
Sbjct: 230 NMDLALDLLKKIEKGKIQPNVVIYSTVIDGLCKYRDVNEALDLFNEMENKGIKPNVITYN 289

Query: 214 IAINCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDMI 387
             I+C C   R      +L   IK   +PDVVTFN LI   +  GK+ +AE+L K+MI
Sbjct: 290 SLISCLCNYGRWSDASRLLSDMIKRKLNPDVVTFNALIDALVKEGKLLEAEELYKEMI 347



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/114 (29%), Positives = 54/114 (47%)
 Frame = +1

Query: 43  DAIALCHDMVRMQPRPSAVDFTKLLSVVVKMRQYPHALQCFTEMLLWNAPVNCYTLNIAI 222
           DA  L  DM++ +  P  V F  L+  +VK  +   A + + EM+  +   N  T N+ I
Sbjct: 303 DASRLLSDMIKRKLNPDVVTFNALIDALVKEGKLLEAEELYKEMIKKSITPNTITYNLLI 362

Query: 223 NCFCRVKRADFGFAILGRFIKLGFDPDVVTFNTLIKGFLTVGKIGKAEKLLKDM 384
           N FC   R D    +    +  G  P+VVT+ TLI G     ++    +L ++M
Sbjct: 363 NGFCMNDRLDEAERMFEFMVSKGSLPNVVTYTTLINGLCKSKRVEDGMELFREM 416