BLASTX nr result

ID: Mentha24_contig00040607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Mentha24_contig00040607
         (368 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347538.1| PREDICTED: uncharacterized protein LOC102596...    57   2e-06
ref|XP_004235042.1| PREDICTED: mutS2 protein-like [Solanum lycop...    57   3e-06
ref|XP_007039246.1| DNA mismatch repair protein MutS, putative [...    56   5e-06

>ref|XP_006347538.1| PREDICTED: uncharacterized protein LOC102596319 [Solanum tuberosum]
          Length = 838

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/58 (48%), Positives = 42/58 (72%)
 Frame = -2

Query: 358 STKQPITEKKLELPKAGDMVSVPSLSKRAAVLEVDPSRGEVVVQAGIXXXXXKIADIL 185
           +++ P++ K+ +LP  GD V VPSL+K+A VL+VDPSR E++VQAG      K+ D+L
Sbjct: 780 TSRLPVSAKRRKLPNVGDSVHVPSLNKQALVLKVDPSREELLVQAGNMKLKLKLTDVL 837


>ref|XP_004235042.1| PREDICTED: mutS2 protein-like [Solanum lycopersicum]
          Length = 807

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/58 (48%), Positives = 42/58 (72%)
 Frame = -2

Query: 358 STKQPITEKKLELPKAGDMVSVPSLSKRAAVLEVDPSRGEVVVQAGIXXXXXKIADIL 185
           +++ P++ K+ +LP  GD V VPSL+K+A VL+VDPSR E++VQAG      K+ D+L
Sbjct: 749 TSRLPLSAKRRKLPNVGDSVHVPSLNKQALVLKVDPSREELLVQAGNMKLKLKLTDVL 806


>ref|XP_007039246.1| DNA mismatch repair protein MutS, putative [Theobroma cacao]
           gi|508776491|gb|EOY23747.1| DNA mismatch repair protein
           MutS, putative [Theobroma cacao]
          Length = 820

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 32/59 (54%), Positives = 37/59 (62%)
 Frame = -2

Query: 364 IDSTKQPITEKKLELPKAGDMVSVPSLSKRAAVLEVDPSRGEVVVQAGIXXXXXKIADI 188
           I   KQP +EK  ELPK GDMV V SL KRA VL VD  + E+VVQAG      K+ D+
Sbjct: 760 IQVIKQPQSEKITELPKVGDMVHVSSLGKRAMVLRVDTYKEEIVVQAGNMKLKLKLIDV 818


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